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Lag0027781 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027781
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr8:4950731..4951195
RNA-Seq ExpressionLag0027781
SyntenyLag0027781
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]4.5e-4271.09Show/hide
Query:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK
        K +KVGD+EI+KESFTTPLTKI KQ+VK    D ++  LP +RTK GFDPKAYKL+AKAGYDFT HTEFKSL + D R ELS+TQKKLL+EG+S+P +RK
Subjt:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK

Query:  GLGYKLPEPVRITRRGKAKVADINHITI
        GLGYK PEP+RIT++GK KV DINHITI
Subjt:  GLGYKLPEPVRITRRGKAKVADINHITI

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]4.5e-4271.09Show/hide
Query:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK
        K +KVGD+EI+KESFTTPLTKI KQ+VK    D ++  LP +RTK GFDPKAYKL+AKAGYDFT HTEFKSL + D R ELS+TQKKLL+EG+S+P +RK
Subjt:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK

Query:  GLGYKLPEPVRITRRGKAKVADINHITI
        GLGYK PEP+RIT++GK KV DINHITI
Subjt:  GLGYKLPEPVRITRRGKAKVADINHITI

XP_031737372.1 uncharacterized protein LOC116402244 [Cucumis sativus]4.5e-4271.09Show/hide
Query:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK
        K +KVGD+EI+KESFTTPLTKI KQ+VK    D ++  LP +RTK GFDPKAYKL+AKAGYDFT HTEFKSL + D R ELS+TQKKLL+EG+S+P +RK
Subjt:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK

Query:  GLGYKLPEPVRITRRGKAKVADINHITI
        GLGYK PEP+RIT++GK KV DINHITI
Subjt:  GLGYKLPEPVRITRRGKAKVADINHITI

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]4.5e-4271.09Show/hide
Query:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK
        K +KVGD+EI+KESFTTPLTKI KQ+VK    D ++  LP +RTK GFDPKAYKL+AKAGYDFT HTEFKSL + D R ELS+TQKKLL+EG+S+P +RK
Subjt:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK

Query:  GLGYKLPEPVRITRRGKAKVADINHITI
        GLGYK PEP+RIT++GK KV DINHITI
Subjt:  GLGYKLPEPVRITRRGKAKVADINHITI

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]4.5e-4271.09Show/hide
Query:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK
        K +KVGD+EI+KESFTTPLTKI KQ+VK    D ++  LP +RTK GFDPKAYKL+AKAGYDFT HTEFKSL + D R ELS+TQKKLL+EG+S+P +RK
Subjt:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK

Query:  GLGYKLPEPVRITRRGKAKVADINHITI
        GLGYK PEP+RIT++GK KV DINHITI
Subjt:  GLGYKLPEPVRITRRGKAKVADINHITI

TrEMBL top hitse value%identityAlignment
A0A5A7UD46 Uncharacterized protein2.0e-4067.19Show/hide
Query:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK
        + +KVG++E+LKESFTTPLTKITKQ++K    D  +  LP +RTK GFDPKAYKL+AKAGYDFTTHTEFKSL+++ E+ +LS+TQKKLL+EG+ +P +RK
Subjt:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK

Query:  GLGYKLPEPVRITRRGKAKVADINHITI
        GLGYK PEP+RITR+GK KV D NHIT+
Subjt:  GLGYKLPEPVRITRRGKAKVADINHITI

A0A5A7V356 Uncharacterized protein1.0e-3965.89Show/hide
Query:  SKNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTR
        S+ +KVGD+E+LKESFTTPLTKITKQ++K    D  +  LP +RTK  FDPKAYKL+AKAGYDFTTHTEFKSL++  E+ ++S+TQKKLL+EG+++P +R
Subjt:  SKNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTR

Query:  KGLGYKLPEPVRITRRGKAKVADINHITI
        KGLGYKLPEP+RITR+GK K+ D NHI +
Subjt:  KGLGYKLPEPVRITRRGKAKVADINHITI

A0A5D3BSG5 Uncharacterized protein1.3e-3967.19Show/hide
Query:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK
        + +KVGD+E+LKESF TPL KITKQ++K    D  K  LP +RTK GFDPKAYKL+AKAGYDFTTHTEFKSL++  E+ +LS+TQKKLL+EG+ +P +RK
Subjt:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK

Query:  GLGYKLPEPVRITRRGKAKVADINHITI
        GLGYK PEP+RITR+GK KV D NHIT+
Subjt:  GLGYKLPEPVRITRRGKAKVADINHITI

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.2e-4067.97Show/hide
Query:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK
        + +KVGD+E+LKESFTTPLTKITKQ++K    D I+  LP +RTK GFDPKAYK +AKAGYDFTTHTEFKSL++  E+ +LS+TQKKLL+EG+++P +RK
Subjt:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK

Query:  GLGYKLPEPVRITRRGKAKVADINHITI
        GLGYK PEP+RITR+GK KV D NHIT+
Subjt:  GLGYKLPEPVRITRRGKAKVADINHITI

A0A5D3C0W6 Ty3-gypsy retrotransposon protein2.7e-4067.19Show/hide
Query:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK
        + +KVGD+E+LKESFTTPLTKITKQ++K    D  +  LP +RTK  FDPKAYKL+AKAGYDFTTHTEFKSL++  E+ +LS+TQKKLL+EG+++P +RK
Subjt:  KNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSATQKKLLKEGYSLPTTRK

Query:  GLGYKLPEPVRITRRGKAKVADINHITI
        GLGYKLPEP+RITR+GK K+ D NHIT+
Subjt:  GLGYKLPEPVRITRRGKAKVADINHITI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGTGTTCACTTGTCCTACGATACGTCCCTTTATCTCGACGTAAAAAGGGTGAATCACCCTTCACTGATGTCCAAAAACATAAAGGTCGGTGACGTTGAAATTCT
GAAAGAAAGTTTCACTACACCTCTTACAAAGATCACAAAGCAAGACGTTAAGAAACTTGAGAATGACCAGATAAAAATGATTTTGCCTGACAAACGGACTAAACACGGGT
TTGACCCCAAGGCATACAAACTTCTAGCGAAAGCGGGTTATGACTTCACAACTCACACTGAGTTTAAAAGTCTAAGGGTTTTTGATGAAAGACTTGAGCTCTCTGCAACA
CAGAAGAAGCTTCTAAAAGAAGGTTATAGTCTGCCTACAACGAGAAAAGGACTTGGATATAAGTTGCCCGAGCCAGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGC
AGACATAAATCATATAACAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGTGTTCACTTGTCCTACGATACGTCCCTTTATCTCGACGTAAAAAGGGTGAATCACCCTTCACTGATGTCCAAAAACATAAAGGTCGGTGACGTTGAAATTCT
GAAAGAAAGTTTCACTACACCTCTTACAAAGATCACAAAGCAAGACGTTAAGAAACTTGAGAATGACCAGATAAAAATGATTTTGCCTGACAAACGGACTAAACACGGGT
TTGACCCCAAGGCATACAAACTTCTAGCGAAAGCGGGTTATGACTTCACAACTCACACTGAGTTTAAAAGTCTAAGGGTTTTTGATGAAAGACTTGAGCTCTCTGCAACA
CAGAAGAAGCTTCTAAAAGAAGGTTATAGTCTGCCTACAACGAGAAAAGGACTTGGATATAAGTTGCCCGAGCCAGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGC
AGACATAAATCATATAACAATATAG
Protein sequenceShow/hide protein sequence
MRSVHLSYDTSLYLDVKRVNHPSLMSKNIKVGDVEILKESFTTPLTKITKQDVKKLENDQIKMILPDKRTKHGFDPKAYKLLAKAGYDFTTHTEFKSLRVFDERLELSAT
QKKLLKEGYSLPTTRKGLGYKLPEPVRITRRGKAKVADINHITI