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Lag0027784 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027784
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr8:4995480..4997348
RNA-Seq ExpressionLag0027784
SyntenyLag0027784
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC30509.1 hypothetical protein L484_010758 [Morus notabilis]6.1e-0652.73Show/hide
Query:  KINLFCRTEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQC
        KINL+ + +++D +N  L  R +E FR  CFGHLLDF  KK  SQL+ HLI  QC
Subjt:  KINLFCRTEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQC

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]1.4e-1030.35Show/hide
Query:  VSTRASDRLKSAGVTPGRKP-PEQTSPITLGSEQDSEEAMSTTVSVTKGSDEKTKGVKRDRDDGGPSKKVIP-SKKTKVRNRTKKTKDEIEKPTEAR---
        + TR SDRL++AG+T  RK  P     ++  SE+  E+ M+                     +G   K+  P + K +VR  TKK +  ++K    +   
Subjt:  VSTRASDRLKSAGVTPGRKP-PEQTSPITLGSEQDSEEAMSTTVSVTKGSDEKTKGVKRDRDDGGPSKKVIP-SKKTKVRNRTKKTKDEIEKPTEAR---

Query:  SNKKTKRSKQTKNTDKASHV---------TPEVAPETSEDTAKHDTEDTESDSVTNENSTSDDGEEQGKKKASLAKKDDD-YFMSPSKRSKALKINLFCR
        S K+  R K  K  +    +         T E+ P+T +  +K   +  +  +V  E    +D   +GK   +  K +D  Y M   +R++ LKINL  +
Subjt:  SNKKTKRSKQTKNTDKASHV---------TPEVAPETSEDTAKHDTEDTESDSVTNENSTSDDGEEQGKKKASLAKKDDD-YFMSPSKRSKALKINLFCR

Query:  TEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQCKPNFTSRLE
        + +++ I   LGDR    FR   FGH L+ +    SSQLLLHLIQ  CKP  TS+L+
Subjt:  TEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQCKPNFTSRLE

XP_024031030.1 uncharacterized protein LOC21394043 [Morus notabilis]6.1e-0652.73Show/hide
Query:  KINLFCRTEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQC
        KINL+ + +++D +N  L  R +E FR  CFGHLLDF  KK  SQL+ HLI  QC
Subjt:  KINLFCRTEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQC

TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like6.8e-1130.35Show/hide
Query:  VSTRASDRLKSAGVTPGRKP-PEQTSPITLGSEQDSEEAMSTTVSVTKGSDEKTKGVKRDRDDGGPSKKVIP-SKKTKVRNRTKKTKDEIEKPTEAR---
        + TR SDRL++AG+T  RK  P     ++  SE+  E+ M+                     +G   K+  P + K +VR  TKK +  ++K    +   
Subjt:  VSTRASDRLKSAGVTPGRKP-PEQTSPITLGSEQDSEEAMSTTVSVTKGSDEKTKGVKRDRDDGGPSKKVIP-SKKTKVRNRTKKTKDEIEKPTEAR---

Query:  SNKKTKRSKQTKNTDKASHV---------TPEVAPETSEDTAKHDTEDTESDSVTNENSTSDDGEEQGKKKASLAKKDDD-YFMSPSKRSKALKINLFCR
        S K+  R K  K  +    +         T E+ P+T +  +K   +  +  +V  E    +D   +GK   +  K +D  Y M   +R++ LKINL  +
Subjt:  SNKKTKRSKQTKNTDKASHV---------TPEVAPETSEDTAKHDTEDTESDSVTNENSTSDDGEEQGKKKASLAKKDDD-YFMSPSKRSKALKINLFCR

Query:  TEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQCKPNFTSRLE
        + +++ I   LGDR    FR   FGH L+ +    SSQLLLHLIQ  CKP  TS+L+
Subjt:  TEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQCKPNFTSRLE

W9SF50 DUF1985 domain-containing protein3.0e-0652.73Show/hide
Query:  KINLFCRTEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQC
        KINL+ + +++D +N  L  R +E FR  CFGHLLDF  KK  SQL+ HLI  QC
Subjt:  KINLFCRTEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCCCTCGCGCAGACCGTCCTCCGTTCAACCCCCCACCTTCGACCGCTCAGCCTCCCTCGCACAAACCGTTCATGCATCTGATCCCGCCGCCGTTCGTGCACC
TGGTCCCACCGTCGAACGTTCGCATTCCACCCATCGTGCTCGCCATACAGTCCCCCTCGGCGCAGGTATGCCCAAGGATAAGCACGTGTCAACTAGAGCGAGCGATCGTT
TGAAGTCTGCGGGAGTAACGCCAGGAAGAAAACCCCCGGAACAAACGTCCCCAATCACATTGGGGAGCGAACAGGACTCTGAAGAAGCCATGAGTACAACAGTTTCAGTC
ACTAAGGGATCCGACGAAAAGACGAAAGGGGTAAAAAGGGACAGAGACGATGGAGGTCCGAGCAAAAAAGTAATTCCATCAAAGAAAACAAAAGTTCGCAACCGGACCAA
GAAGACCAAAGATGAGATTGAGAAACCCACTGAGGCACGAAGCAATAAGAAGACAAAGCGGTCGAAACAGACTAAAAACACAGATAAGGCGAGTCATGTGACACCAGAGG
TTGCCCCTGAAACAAGCGAGGACACCGCTAAACATGACACCGAAGACACCGAATCTGATAGTGTGACGAATGAAAACTCCACGAGTGATGACGGGGAAGAACAAGGGAAA
AAGAAGGCATCACTTGCTAAAAAGGACGATGATTACTTTATGTCACCATCGAAAAGAAGTAAGGCCCTAAAGATTAACCTATTTTGCAGAACAGAAATAATGGACACCAT
CAACAACATCCTAGGAGATAGGTGCAGAGAAGCTTTCAGAAACACGTGCTTCGGCCACCTACTTGACTTCACGTTCAAAAAGACGTCTTCCCAGTTACTATTGCACTTGA
TCCAGCATCAGTGCAAACCCAACTTTACTTCAAGATTGGAGGGAAAATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCTCCCTCGCGCAGACCGTCCTCCGTTCAACCCCCCACCTTCGACCGCTCAGCCTCCCTCGCACAAACCGTTCATGCATCTGATCCCGCCGCCGTTCGTGCACC
TGGTCCCACCGTCGAACGTTCGCATTCCACCCATCGTGCTCGCCATACAGTCCCCCTCGGCGCAGGTATGCCCAAGGATAAGCACGTGTCAACTAGAGCGAGCGATCGTT
TGAAGTCTGCGGGAGTAACGCCAGGAAGAAAACCCCCGGAACAAACGTCCCCAATCACATTGGGGAGCGAACAGGACTCTGAAGAAGCCATGAGTACAACAGTTTCAGTC
ACTAAGGGATCCGACGAAAAGACGAAAGGGGTAAAAAGGGACAGAGACGATGGAGGTCCGAGCAAAAAAGTAATTCCATCAAAGAAAACAAAAGTTCGCAACCGGACCAA
GAAGACCAAAGATGAGATTGAGAAACCCACTGAGGCACGAAGCAATAAGAAGACAAAGCGGTCGAAACAGACTAAAAACACAGATAAGGCGAGTCATGTGACACCAGAGG
TTGCCCCTGAAACAAGCGAGGACACCGCTAAACATGACACCGAAGACACCGAATCTGATAGTGTGACGAATGAAAACTCCACGAGTGATGACGGGGAAGAACAAGGGAAA
AAGAAGGCATCACTTGCTAAAAAGGACGATGATTACTTTATGTCACCATCGAAAAGAAGTAAGGCCCTAAAGATTAACCTATTTTGCAGAACAGAAATAATGGACACCAT
CAACAACATCCTAGGAGATAGGTGCAGAGAAGCTTTCAGAAACACGTGCTTCGGCCACCTACTTGACTTCACGTTCAAAAAGACGTCTTCCCAGTTACTATTGCACTTGA
TCCAGCATCAGTGCAAACCCAACTTTACTTCAAGATTGGAGGGAAAATCTTAA
Protein sequenceShow/hide protein sequence
MQSPSRRPSSVQPPTFDRSASLAQTVHASDPAAVRAPGPTVERSHSTHRARHTVPLGAGMPKDKHVSTRASDRLKSAGVTPGRKPPEQTSPITLGSEQDSEEAMSTTVSV
TKGSDEKTKGVKRDRDDGGPSKKVIPSKKTKVRNRTKKTKDEIEKPTEARSNKKTKRSKQTKNTDKASHVTPEVAPETSEDTAKHDTEDTESDSVTNENSTSDDGEEQGK
KKASLAKKDDDYFMSPSKRSKALKINLFCRTEIMDTINNILGDRCREAFRNTCFGHLLDFTFKKTSSQLLLHLIQHQCKPNFTSRLEGKS