; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027794 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027794
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon protein
Genome locationchr8:5128066..5128806
RNA-Seq ExpressionLag0027794
SyntenyLag0027794
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-2436.65Show/hide
Query:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWHMYL-GRIEPRGGVSEVMVEMGSNVPD--DAVNLSGSPDNDIPIPSFTMPNVNM
        M GP CSGFGWN+E KCI AEKE+FD         L + S +      Y+ G+    GG +E   ++GSN P   DAV     PD D P P ++ P +NM
Subjt:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWHMYL-GRIEPRGGVSEVMVEMGSNVPD--DAVNLSGSPDNDIPIPSFTMPNVNM

Query:  SEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMKATE
        S D+   T  ++     N S GSKRKR G      + VR  +    EQL  IAEWP  +R    +   +IV HL  +P+L    R +L+ IL  N+   +
Subjt:  SEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMKATE

Query:  SFFSISAPLKLEYCEYLLDKH
        +F  +   +K  YC  +L ++
Subjt:  SFFSISAPLKLEYCEYLLDKH

KAA0048362.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-2436.65Show/hide
Query:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWHMYL-GRIEPRGGVSEVMVEMGSNVPD--DAVNLSGSPDNDIPIPSFTMPNVNM
        M GP CSGFGWN+E KCI AEKE+FD         L + S +      Y+ G+    GG +E   ++GSN P   DAV     PD D P P ++ P +NM
Subjt:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWHMYL-GRIEPRGGVSEVMVEMGSNVPD--DAVNLSGSPDNDIPIPSFTMPNVNM

Query:  SEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMKATE
        S D+   T  ++     N S GSKRKR G      + VR  +    EQL  IAEWP  +R    +   +IV HL  +P+L    R +L+ IL  N+   +
Subjt:  SEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMKATE

Query:  SFFSISAPLKLEYCEYLLDKH
        +F  +   +K  YC  +L ++
Subjt:  SFFSISAPLKLEYCEYLLDKH

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]8.4e-2636.16Show/hide
Query:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQ---RACLTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN
        M GP CSGFGWNEEF+CI AE+++FD  ++S    +  L    P         G+    G  SE  V++GSNVP   +D + L  S D DIP        
Subjt:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQ---RACLTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN

Query:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK
          M      ++PD           G +          AE +R  M    EQLK+IA+W  +KRA E E   ++V  L ++P+L ++ R KL+ ILF +++
Subjt:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK

Query:  ATESFFSISAPLKLEYCEYLLDKH
        A   F SI   LKLEYC  LL  +
Subjt:  ATESFFSISAPLKLEYCEYLLDKH

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.0e-3141.18Show/hide
Query:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRAC---LTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN
        M GP CSGFGWNEEF+CI AE+++FD  I+S  A    L    P         G+    G  SE    +GSNV    +D + L  S D D  IP+     
Subjt:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRAC---LTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN

Query:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK
        V+MS DE       Q     N S  SKRKR        E +R  M    EQLK+IA+WP +KRA E E   ++V  L ++P L ++ R KL+ ILF +++
Subjt:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK

Query:  ATESFFSISAPLKLEYCEYLL
        A E F SI   LKLEYC  LL
Subjt:  ATESFFSISAPLKLEYCEYLL

XP_038899283.1 uncharacterized protein LOC120086622 [Benincasa hispida]1.6e-2937.95Show/hide
Query:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWH---MYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN
        M G  CSGFGWNEEF+CI AEKE FD  ++S  A    L+     +       G+    G  +E+  +M S+VP    +  +   S ++D          
Subjt:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWH---MYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN

Query:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK
          +S+DE   TP    +   NS RGSKRK  G +  + +  +  M    +QLKSIAEW  K+ ATE E   K+V+ L ++P L+ ++++K ++I+F N+ 
Subjt:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK

Query:  ATESFFSISAPLKLEYCEYLLDKH
         TESF SI A +KLEYCE LL  H
Subjt:  ATESFFSISAPLKLEYCEYLLDKH

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859534.9e-3241.18Show/hide
Query:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRAC---LTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN
        M GP CSGFGWNEEF+CI AE+++FD  I+S  A    L    P         G+    G  SE    +GSNV    +D + L  S D D  IP+     
Subjt:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRAC---LTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN

Query:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK
        V+MS DE       Q     N S  SKRKR        E +R  M    EQLK+IA+WP +KRA E E   ++V  L ++P L ++ R KL+ ILF +++
Subjt:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK

Query:  ATESFFSISAPLKLEYCEYLL
        A E F SI   LKLEYC  LL
Subjt:  ATESFFSISAPLKLEYCEYLL

A0A5A7TI07 Retrotransposon protein1.5e-2034.39Show/hide
Query:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWHMYL-GRIEPRGGVSEVMVEMGSNVPD--DAVNLSGSPDNDIPIPSFTMPNVNM
        M GP CSGFGWN+E KCI AEKE+FD         L + S +      Y+ G+    GG +E   ++GSN P   DA     +PD +   P ++ P +NM
Subjt:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWHMYL-GRIEPRGGVSEVMVEMGSNVPD--DAVNLSGSPDNDIPIPSFTMPNVNM

Query:  SEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMKATE
        S D+      ++     N SRGSKRKR+G      + VR  +    EQL  IAEW   +R    +   +IV  L  +P+L    R +L+ IL  N+   +
Subjt:  SEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMKATE

Query:  SFFSISAPLKLEYCEYLLDKH
        +F  +   +K  YC  +L ++
Subjt:  SFFSISAPLKLEYCEYLLDKH

A0A5A7U0H7 Retrotransposon protein4.9e-3241.18Show/hide
Query:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRAC---LTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN
        M GP CSGFGWNEEF+CI AE+++FD  I+S  A    L    P         G+    G  SE    +GSNV    +D + L  S D D  IP+     
Subjt:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRAC---LTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN

Query:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK
        V+MS DE       Q     N S  SKRKR        E +R  M    EQLK+IA+WP +KRA E E   ++V  L ++P L ++ R KL+ ILF +++
Subjt:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK

Query:  ATESFFSISAPLKLEYCEYLL
        A E F SI   LKLEYC  LL
Subjt:  ATESFFSISAPLKLEYCEYLL

A0A5A7U252 Retrotransposon protein3.3e-2034.39Show/hide
Query:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWHMY-LGRIEPRGGVSEVMVEMGSNVPD--DAVNLSGSPDNDIPIPSFTMPNVNM
        M GP CSGFGWN+E KCI AEKE+FD         L + S +      Y +G+    GG +E   ++GSN P   DA     +PD +   P ++ P +NM
Subjt:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWHMY-LGRIEPRGGVSEVMVEMGSNVPD--DAVNLSGSPDNDIPIPSFTMPNVNM

Query:  SEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMKATE
        S D+   T  S+     N S GSKRKR+G      + VR  +    EQL  IAEWP  +R    +   +IV  L  +P+L    R +L+     N+   +
Subjt:  SEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMKATE

Query:  SFFSISAPLKLEYCEYLLDKH
        +F  +   +K  YC  +L ++
Subjt:  SFFSISAPLKLEYCEYLLDKH

A0A5D3DG22 Retrotransposon protein4.1e-2636.16Show/hide
Query:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQ---RACLTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN
        M GP CSGFGWNEEF+CI AE+++FD  ++S    +  L    P         G+    G  SE  V++GSNVP   +D + L  S D DIP        
Subjt:  MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQ---RACLTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVP---DDAVNLSGSPDNDIPIPSFTMPN

Query:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK
          M      ++PD           G +          AE +R  M    EQLK+IA+W  +KRA E E   ++V  L ++P+L ++ R KL+ ILF +++
Subjt:  VNMSEDEPQVTPDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMK

Query:  ATESFFSISAPLKLEYCEYLLDKH
        A   F SI   LKLEYC  LL  +
Subjt:  ATESFFSISAPLKLEYCEYLLDKH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGCCCTGGATGCAGTGGCTTCGGCTGGAACGAGGAATTTAAGTGCATCGATGCGGAGAAAGAAATATTCGACTTAATCATCCAATCGCAAAGGGCATGCTTAAC
AAGCCTTTCCCCCATTTTGAGGACCTGGCATATGTATTTGGGAAGGATAGAGCCACGAGGGGGGGTGTCAGAGGTGATGGTAGAGATGGGGTCTAACGTACCAGATGATG
CAGTAAACCTAAGTGGATCTCCGGACAACGACATCCCCATCCCGTCGTTCACCATGCCTAATGTGAACATGTCAGAGGATGAGCCTCAGGTGACGCCGGACAGTCAAACT
TACGCAACCGGGAATTCGTCACGTGGTAGTAAGAGAAAGAGATCTGGGCCTAACATGCACATCGCAGAAGCTGTGAGAGAGGGAATGGGCTCGTTCACAGAACAACTTAA
GTCCATTGCTGAATGGCCAGACAAAAAACGTGCCACAGAGGCAGAGTTCTGGGATAAAATTGTCTCCCACTTGATGGAGGTACCCGACCTGGAGAACCGAAAAAGGGTGA
AGCTCGTGGATATCCTTTTCAATAACATGAAAGCGACAGAGAGCTTCTTCTCAATTTCTGCTCCTTTGAAGTTGGAGTATTGTGAATACCTCTTGGACAAACACAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGCCCTGGATGCAGTGGCTTCGGCTGGAACGAGGAATTTAAGTGCATCGATGCGGAGAAAGAAATATTCGACTTAATCATCCAATCGCAAAGGGCATGCTTAAC
AAGCCTTTCCCCCATTTTGAGGACCTGGCATATGTATTTGGGAAGGATAGAGCCACGAGGGGGGGTGTCAGAGGTGATGGTAGAGATGGGGTCTAACGTACCAGATGATG
CAGTAAACCTAAGTGGATCTCCGGACAACGACATCCCCATCCCGTCGTTCACCATGCCTAATGTGAACATGTCAGAGGATGAGCCTCAGGTGACGCCGGACAGTCAAACT
TACGCAACCGGGAATTCGTCACGTGGTAGTAAGAGAAAGAGATCTGGGCCTAACATGCACATCGCAGAAGCTGTGAGAGAGGGAATGGGCTCGTTCACAGAACAACTTAA
GTCCATTGCTGAATGGCCAGACAAAAAACGTGCCACAGAGGCAGAGTTCTGGGATAAAATTGTCTCCCACTTGATGGAGGTACCCGACCTGGAGAACCGAAAAAGGGTGA
AGCTCGTGGATATCCTTTTCAATAACATGAAAGCGACAGAGAGCTTCTTCTCAATTTCTGCTCCTTTGAAGTTGGAGTATTGTGAATACCTCTTGGACAAACACAGTTGA
Protein sequenceShow/hide protein sequence
MMGPGCSGFGWNEEFKCIDAEKEIFDLIIQSQRACLTSLSPILRTWHMYLGRIEPRGGVSEVMVEMGSNVPDDAVNLSGSPDNDIPIPSFTMPNVNMSEDEPQVTPDSQT
YATGNSSRGSKRKRSGPNMHIAEAVREGMGSFTEQLKSIAEWPDKKRATEAEFWDKIVSHLMEVPDLENRKRVKLVDILFNNMKATESFFSISAPLKLEYCEYLLDKHS