; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027797 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027797
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr8:5228783..5229914
RNA-Seq ExpressionLag0027797
SyntenyLag0027797
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO67823.1 reverse transcriptase [Corchorus capsularis]3.4e-0923.58Show/hide
Query:  GKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICV-DRNLMDEKVSDFVSPSDEWNIARLRSYVESTDHILFDCSRARERSPAGQSGVRNKVAHGED
        G+ ++ +G R+R+G G  ++++ DPWI +  SF+P+ + +  + D +VS+ +S    WN+  L    +  D                       V     
Subjt:  GKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICV-DRNLMDEKVSDFVSPSDEWNIARLRSYVESTDHILFDCSRARERSPAGQSGVRNKVAHGED

Query:  IPPTNARSRWIVDYLEEYLRANERSPTSSNNRTQAKIPLANACWYPPPADFWKLNTDAVWTVDPLRDRCWGHMQRPPRSHIK---AHNYDLNHEGPTIEL
        +P +    + +V  ++E        P   +  T+A     N  W+PPPA  +KLNTD  + VD   +   G + R     I+           +    E+
Subjt:  IPPTNARSRWIVDYLEEYLRANERSPTSSNNRTQAKIPLANACWYPPPADFWKLNTDAVWTVDPLRDRCWGHMQRPPRSHIK---AHNYDLNHEGPTIEL

Query:  KAFLIGINLAKSLGCVKLELESNCEMTIK
         A   G+ +A+  G  KL ++S+C   I+
Subjt:  KAFLIGINLAKSLGCVKLELESNCEMTIK

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]4.3e-1250Show/hide
Query:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYV---ESTDHIL
        +WG+DLLIKG+R RVGNG +I +F DPWIPR  SF+PI       D KV+D ++P+ +W++  L SY+   E  D IL
Subjt:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYV---ESTDHIL

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.0e-1042.19Show/hide
Query:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARL
        +WG+DLL+KG+R RVGNG +I  F DPW+PR  +FKP+  +   +D  V+ F++    W++  +
Subjt:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARL

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]3.4e-0947.95Show/hide
Query:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVD-RNLMDEKVSDFVSPSDEWNIARLRSYVESTD
        +WGK+LLIKG+R R+GNG +  +FKDPWIPR  SF PI  +  NLM   VS+ +  S +WNI  +     + D
Subjt:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVD-RNLMDEKVSDFVSPSDEWNIARLRSYVESTD

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]9.8e-0937.5Show/hide
Query:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYVESTD
        +WGK+LL+KG+R+R+G+G  +     PWIP  ++FKP+       D KV+DF++ S +W++ +L+ +    D
Subjt:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYVESTD

TrEMBL top hitse value%identityAlignment
A0A1R3HC77 Reverse transcriptase1.6e-0923.58Show/hide
Query:  GKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICV-DRNLMDEKVSDFVSPSDEWNIARLRSYVESTDHILFDCSRARERSPAGQSGVRNKVAHGED
        G+ ++ +G R+R+G G  ++++ DPWI +  SF+P+ + +  + D +VS+ +S    WN+  L    +  D                       V     
Subjt:  GKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICV-DRNLMDEKVSDFVSPSDEWNIARLRSYVESTDHILFDCSRARERSPAGQSGVRNKVAHGED

Query:  IPPTNARSRWIVDYLEEYLRANERSPTSSNNRTQAKIPLANACWYPPPADFWKLNTDAVWTVDPLRDRCWGHMQRPPRSHIK---AHNYDLNHEGPTIEL
        +P +    + +V  ++E        P   +  T+A     N  W+PPPA  +KLNTD  + VD   +   G + R     I+           +    E+
Subjt:  IPPTNARSRWIVDYLEEYLRANERSPTSSNNRTQAKIPLANACWYPPPADFWKLNTDAVWTVDPLRDRCWGHMQRPPRSHIK---AHNYDLNHEGPTIEL

Query:  KAFLIGINLAKSLGCVKLELESNCEMTIK
         A   G+ +A+  G  KL ++S+C   I+
Subjt:  KAFLIGINLAKSLGCVKLELESNCEMTIK

A0A6J1BRN0 uncharacterized protein LOC1110047872.1e-1250Show/hide
Query:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYV---ESTDHIL
        +WG+DLLIKG+R RVGNG +I +F DPWIPR  SF+PI       D KV+D ++P+ +W++  L SY+   E  D IL
Subjt:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYV---ESTDHIL

A0A6J1DX30 uncharacterized protein LOC1110248741.5e-1042.19Show/hide
Query:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARL
        +WG+DLL+KG+R RVGNG +I  F DPW+PR  +FKP+  +   +D  V+ F++    W++  +
Subjt:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARL

A0A803NTN0 Uncharacterized protein1.2e-0945.07Show/hide
Query:  WGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYVESTD
        WG+DLL+KG+R++VGNG +I    DPWIP   +FKP+   +      VS F++   EWNI  L SY +  D
Subjt:  WGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYVESTD

A0A803P614 Uncharacterized protein4.6e-1226.98Show/hide
Query:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYVESTD----------------------------
        +WG+ LL+KG+R+++G G+ I +  DPWIP  ++F P        D  VS  ++    WN+  L+ +    D                            
Subjt:  MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYVESTD----------------------------

Query:  -HILFDCSRARERSPAGQSGVRNKVAHGEDIPPTNARSRWIVDYLEEYLRANERSPTSSNNRTQAKIPLANAC-WYPPPADFWKLNTDA
         H L D +  ++R P G    RN+V HG    P +  + + V+YL  +  A  +  T S + +     +  A  W PP     KLN DA
Subjt:  -HILFDCSRARERSPAGQSGVRNKVAHGEDIPPTNARSRWIVDYLEEYLRANERSPTSSNNRTQAKIPLANAC-WYPPPADFWKLNTDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGAAAGGATCTCCTAATTAAGGGTATCCGCTATAGGGTTGGTAATGGAAAGAGCATATTTATGTTCAAAGACCCCTGGATTCCAAGAGGTAACTCCTTTAAACC
TATTTGTGTTGATAGGAACCTAATGGATGAGAAGGTTTCAGATTTCGTTTCCCCTTCAGATGAGTGGAACATAGCTAGACTTAGAAGCTATGTTGAGTCCACAGATCATA
TTCTCTTCGATTGCAGTAGAGCGAGAGAGCGGTCGCCTGCTGGTCAATCTGGAGTGAGAAATAAAGTGGCTCATGGTGAAGATATCCCTCCAACCAACGCAAGAAGTAGA
TGGATAGTGGATTACCTGGAAGAATACCTGCGAGCGAACGAAAGATCTCCAACCTCCTCGAATAATCGGACTCAAGCTAAAATTCCTCTCGCTAATGCATGTTGGTATCC
ACCCCCCGCAGACTTCTGGAAACTGAATACAGATGCGGTGTGGACTGTGGATCCCCTCCGTGACAGGTGTTGGGGCCATATGCAAAGACCGCCAAGGAGCCATATAAAAG
CCCATAACTATGATTTGAACCATGAAGGCCCAACAATTGAATTAAAGGCCTTTTTGATAGGTATCAATTTGGCAAAATCTTTGGGTTGCGTTAAGCTTGAATTGGAATCT
AATTGTGAAATGACCATAAAATTTAGGGGCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGAAAGGATCTCCTAATTAAGGGTATCCGCTATAGGGTTGGTAATGGAAAGAGCATATTTATGTTCAAAGACCCCTGGATTCCAAGAGGTAACTCCTTTAAACC
TATTTGTGTTGATAGGAACCTAATGGATGAGAAGGTTTCAGATTTCGTTTCCCCTTCAGATGAGTGGAACATAGCTAGACTTAGAAGCTATGTTGAGTCCACAGATCATA
TTCTCTTCGATTGCAGTAGAGCGAGAGAGCGGTCGCCTGCTGGTCAATCTGGAGTGAGAAATAAAGTGGCTCATGGTGAAGATATCCCTCCAACCAACGCAAGAAGTAGA
TGGATAGTGGATTACCTGGAAGAATACCTGCGAGCGAACGAAAGATCTCCAACCTCCTCGAATAATCGGACTCAAGCTAAAATTCCTCTCGCTAATGCATGTTGGTATCC
ACCCCCCGCAGACTTCTGGAAACTGAATACAGATGCGGTGTGGACTGTGGATCCCCTCCGTGACAGGTGTTGGGGCCATATGCAAAGACCGCCAAGGAGCCATATAAAAG
CCCATAACTATGATTTGAACCATGAAGGCCCAACAATTGAATTAAAGGCCTTTTTGATAGGTATCAATTTGGCAAAATCTTTGGGTTGCGTTAAGCTTGAATTGGAATCT
AATTGTGAAATGACCATAAAATTTAGGGGCAACTAG
Protein sequenceShow/hide protein sequence
MWGKDLLIKGIRYRVGNGKSIFMFKDPWIPRGNSFKPICVDRNLMDEKVSDFVSPSDEWNIARLRSYVESTDHILFDCSRARERSPAGQSGVRNKVAHGEDIPPTNARSR
WIVDYLEEYLRANERSPTSSNNRTQAKIPLANACWYPPPADFWKLNTDAVWTVDPLRDRCWGHMQRPPRSHIKAHNYDLNHEGPTIELKAFLIGINLAKSLGCVKLELES
NCEMTIKFRGN