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Lag0027807 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027807
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:5354170..5354508
RNA-Seq ExpressionLag0027807
SyntenyLag0027807
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010694404.1 PREDICTED: uncharacterized protein LOC104907208 [Beta vulgaris subsp. vulgaris]1.2e-1237.27Show/hide
Query:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVK
        MD F+++++ CEL D+G+    FT +RG +  + +KERLDRF  N+    + P  +V H   + SDH  I+  +  D T     KKGK+ RF+  WL  +
Subjt:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVK

Query:  GARDVVANSW
           +VVA +W
Subjt:  GARDVVANSW

XP_021751074.1 uncharacterized protein LOC110716746 [Chenopodium quinoa]1.7e-1135.45Show/hide
Query:  DMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDD-PTPAMILKKGKMLRFDEGWLKVK
        D+ +++++ C+L D+G+   +FT    +     I+ERLDRF  N S  V+ P   V HL    SDH  I+ C ++D   P    KK KM RF+E WL+ +
Subjt:  DMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDD-PTPAMILKKGKMLRFDEGWLKVK

Query:  GARDVVANSW
            +V+++W
Subjt:  GARDVVANSW

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]5.1e-1135.14Show/hide
Query:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKM-LRFDEGWLKV
        M  F+D+L+ C L+D GF  D FT   G   +  I ERLDRF IN ++  +   ++++HL +  SDHR I+A W       +  +KG+   RF+E W   
Subjt:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKM-LRFDEGWLKV

Query:  KGARDVVANSW
        +  +++V   W
Subjt:  KGARDVVANSW

XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]1.7e-1135.14Show/hide
Query:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVK
        M  F+ +L++C L ++    D FT  R +   S +KERLD   INH         K+ HL+Y+GSDHR ++A  + + TP     +    RF++ WLK K
Subjt:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVK

Query:  GARDVVANSWV
           ++++NSW+
Subjt:  GARDVVANSWV

XP_030502555.1 uncharacterized protein LOC115717715 [Cannabis sativa]1.7e-1133.64Show/hide
Query:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVK
        M  F+ +L++C L ++  + D FT  + + K + +KERLD   INH         K+ HL+Y+GSDHR ++A  + +PT  +   +    RF++ WLK K
Subjt:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVK

Query:  GARDVVANSW
           +++++SW
Subjt:  GARDVVANSW

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224232.5e-1135.14Show/hide
Query:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKM-LRFDEGWLKV
        M  F+D+L+ C L+D GF  D FT   G   +  I ERLDRF IN ++  +   ++++HL +  SDHR I+A W       +  +KG+   RF+E W   
Subjt:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKM-LRFDEGWLKV

Query:  KGARDVVANSW
        +  +++V   W
Subjt:  KGARDVVANSW

A0A6J1DUG8 uncharacterized protein LOC1110241353.2e-1143.42Show/hide
Query:  IKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVKGARDVVANSW
        I ERLDRF IN SM     ++KV HL    SDHR I+A W+ +   A    K + +RF+E WL++ G RD++  +W
Subjt:  IKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVKGARDVVANSW

A0A803M8Y9 Uncharacterized protein5.5e-1135.78Show/hide
Query:  DMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVKG
        D+F+ ++  CEL D+GF    FT    +     ++ERLDR+  N     L P   V HL+   SDH  I+ C  +        KK K+ RF+E WL+ + 
Subjt:  DMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVKG

Query:  ARDVVANSW
          D+VAN+W
Subjt:  ARDVVANSW

A0A803NG99 Uncharacterized protein3.2e-1134.51Show/hide
Query:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAI---IACWEDDPTPAMILKKGKMLRFDEGWL
        M  F+++L+RC L ++ +  D+FT  + K   + +KERLD   IN+      P   V HL+Y+GSDHRA+   +        P+ + K+    RF+E WL
Subjt:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAI---IACWEDDPTPAMILKKGKMLRFDEGWL

Query:  KVKGARDVVANSW
        K     D++ +SW
Subjt:  KVKGARDVVANSW

A0A803PIB6 Uncharacterized protein8.5e-1235.14Show/hide
Query:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVK
        M  F+ +L++C L ++    D FT  R +   S +KERLD   INH         K+ HL+Y+GSDHR ++A  + + TP     +    RF++ WLK K
Subjt:  MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVK

Query:  GARDVVANSWV
           ++++NSW+
Subjt:  GARDVVANSWV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGTTCCAAGACTCCCTCAATAGATGTGAGCTTATGGACGTCGGGTTCTCTAGAGATAATTTCACCGGGAAAAGAGGTAAAAACAAAAAATCCCAAATTAAGGA
GCGCTTAGACAGGTTTTGTATAAACCATTCTATGGCTGTATTAGCCCCTGATATCAAAGTTAAGCATTTAAATTACTTTGGCTCGGATCATAGAGCAATCATAGCGTGCT
GGGAGGATGATCCCACCCCTGCTATGATTTTGAAGAAAGGAAAAATGCTGCGTTTTGACGAAGGTTGGCTGAAAGTCAAAGGCGCTAGGGATGTTGTTGCTAACAGTTGG
GTGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATGTTCCAAGACTCCCTCAATAGATGTGAGCTTATGGACGTCGGGTTCTCTAGAGATAATTTCACCGGGAAAAGAGGTAAAAACAAAAAATCCCAAATTAAGGA
GCGCTTAGACAGGTTTTGTATAAACCATTCTATGGCTGTATTAGCCCCTGATATCAAAGTTAAGCATTTAAATTACTTTGGCTCGGATCATAGAGCAATCATAGCGTGCT
GGGAGGATGATCCCACCCCTGCTATGATTTTGAAGAAAGGAAAAATGCTGCGTTTTGACGAAGGTTGGCTGAAAGTCAAAGGCGCTAGGGATGTTGTTGCTAACAGTTGG
GTGGGCTGA
Protein sequenceShow/hide protein sequence
MDMFQDSLNRCELMDVGFSRDNFTGKRGKNKKSQIKERLDRFCINHSMAVLAPDIKVKHLNYFGSDHRAIIACWEDDPTPAMILKKGKMLRFDEGWLKVKGARDVVANSW
VG