| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7542996.1 Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | 1.4e-66 | 39.55 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVD---TSLDHGIS
+R+FG LC+ STLP H+TKFS R P VF+GYP +K +++ ++ + + SR+V+FHENIF F V L+D + P+ +LP L D +S H I
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVD---TSLDHGIS
Query: ETFSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFL
+++ S++ + + +S P S N+ V T S+ + H+ S+ H+ + +P+ + + P V
Subjt: ETFSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFL
Query: RRSTRATKQPTYLQDFHCHLASSSNLPPTPM---RHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPP
R R K P+YL +HC+L + N PTP+ R+PL + + Y LAP FQ F L+I P + QA+ E+W++A +ELTA+E + TWS+V LPP
Subjt: RRSTRATKQPTYLQDFHCHLASSSNLPPTPM---RHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPP
Query: KKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQPP
+ +GCKWV+ IK+ A+G++ERYKARLVAK YTQ+EG+D+ +TFS VAKL T+++LL V +N +L Q+DV+NAFLHG+L EE+YM L GY PP
Subjt: KKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQPP
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| RVW23791.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.4e-65 | 42.01 | Show/hide |
Query: RLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETFS
R FGCL FASTL +H+TKF R+ V +GYPP +K YRL+ + ++ F S+D IFHE IF FH T D+L + PN VL
Subjt: RLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETFS
Query: LDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDP-LQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRRS
P+S + +++S + P +D + P L P ++ F + ++ D + +H ++P + V LRRS
Subjt: LDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDP-LQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRRS
Query: TRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHSIG
R +K P YL+DFH +L S +LP +PL Y+ + L+ S V F HWR AM+ EL AME N TWS+V LP KHSIG
Subjt: TRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHSIG
Query: CKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGY
CKW+YK+K K++GSIER+KA +VAK YTQ+EGLDF ETFS VAKLVT++VLL + Q LVQLDVNNAFL+G LFEEVYMDL LGY
Subjt: CKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGY
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| RVX06074.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.0e-65 | 41.15 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETF
+R+FGCLC+ STL +++TKFS R VVF+GYP K Y+L IE R SR+VIFHE IF F K N +SLD IS
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETF
Query: SLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRRS
D + N+ S ++VL QPP LQ V PS R
Subjt: SLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRRS
Query: TRATKQPTYLQDFHCHLASS-SNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHSI
TR +KQP+YL+D+HC L +S +++ HP+Q+++ Y +L+PS++ F+LS+ P + +A WR AM+ EL A+E N TWSIV LP KH +
Subjt: TRATKQPTYLQDFHCHLASS-SNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHSI
Query: GCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQPPKASIVQGS
GCKWVYKIKHKANG+IERYKARLVAK YTQ+EG+D+++TFS VAKLVT+++LL + + L QLDVNNAFLHGDL EEVYM L GY S+ +
Subjt: GCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQPPKASIVQGS
Query: V
V
Subjt: V
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| TYK16758.1 Copia protein [Cucumis melo var. makuwa] | 2.4e-79 | 43.88 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETF
+++FG LC+AS+LP +++KF R P VF+GYP MKAY+L+ IE ++ F SRDVIFHE F FH + + LP F LPK F+ H
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETF
Query: SLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRRS
T+L P ++ NT T + P+ ++ +D + + + + D+ + SQ + P + + +R+S
Subjt: SLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRRS
Query: TRATKQPTYLQDFHCHLASSSNLPPT--PMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHS
TR TK P+YLQ +HC L ++ + P T ++P+ Y+ Y L+P+++ L + +YH+AV + WR+AM+ EL AME N TWSIVPLP K+S
Subjt: TRATKQPTYLQDFHCHLASSSNLPPT--PMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHS
Query: IGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQP
IGC+WVYKIKHK +GSIERYKARLVAK YTQ+EGLD+ ETFS VAK+VT++ LLT+ VS+ LVQLDVNNAFLHG+LFEEVYMDL LGY+P
Subjt: IGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQP
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| XP_022154919.1 uncharacterized protein LOC111022065 [Momordica charantia] | 2.2e-93 | 48.39 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFN-VDTSL----DH-
+++FGCLCF ST P +++KF R VFVGYPP MK Y+L+ IE +RFF SRDVIFHE+IF FH V++ + + P V+PK ++ VDTS DH
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFN-VDTSL----DH-
Query: ------GISETFSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHT--LQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHE
+S T + + T V+ D G P+ +AN + S I + + P + + P L ++ VD + +PS ++
Subjt: ------GISETFSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHT--LQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHE
Query: ASPKQSYVSFLRRSTRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNT
LRRS+R ++P+YL+D+HC L +++ + + +PLQ Y+ Y+ L+ S++ F LS+ ++ PQ+YHQAVPF HWR+AM EL AMEAN+T
Subjt: ASPKQSYVSFLRRSTRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNT
Query: WSIVPLPPKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLL
WS+VPLP + HSIGCKW+YK+KHK++GSIERYKARLVAK YTQ+EGLD+IETFS VAKLVT++VLLT+ VS N +LVQLDVNNAFLHGDLFEEVYMDL L
Subjt: WSIVPLPPKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLL
Query: GYQ
GY+
Subjt: GYQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9EHN7 Integrase catalytic domain-containing protein | 1.6e-76 | 45.84 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETF
+++FGCLCFASTL SH+TKF R VF+GYP +K Y+L + + F SRDV+FHE IF F T + T FL S IS T
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETF
Query: SLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPS-QHIHEASPKQSYVSFLRR
P I + +++ + + + P P + P LP F D S H ++ + + +PS HI SP QS S LRR
Subjt: SLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPS-QHIHEASPKQSYVSFLRR
Query: STRATKQPTYLQDFHCHLA---SSSNLPP-----TPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVP
STR K PTYLQD+HC LA S++ PP TP +PL + Y L+P+ + F LS+ A P +HQA HW++AM EL A+EANNTW++ P
Subjt: STRATKQPTYLQDFHCHLA---SSSNLPP-----TPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVP
Query: LPPKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGY
LPP KH IGCKWVYK+K K++GS+ERYKARLVAK YTQ+EGLD+ ETFS VAK T+R LL V ++N SL QLDVNNAFLHGDL EEVYM L LG+
Subjt: LPPKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGY
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| A0A2N9F124 Integrase catalytic domain-containing protein | 2.8e-73 | 42.28 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLP-NFVLPKLFNVDTSLDHGISET
+++FGCL +ASTLPSH+TKF R P VF+GYP K Y+LF++ + F SRDV+FHE++F F F P +F P + D S S
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLP-NFVLPKLFNVDTSLDHGISET
Query: FSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRR
F +D + + S P T+ T ++ P PP H P ++ + H P I+P+ I P Q R+
Subjt: FSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRR
Query: STRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHSI
STR+T P+YLQD+HCHLAS++ P + +P+ + YS L+P+ + +T++I A P++YH+AV HW AME EL A+EAN+TW + LP KH I
Subjt: STRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHSI
Query: GCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQPPKAS
GCKWVYKIK K++GSIERYKARLVAK Y Q EG+D+ ETFS VAKLVT+R + + ++ L QLDVNNAFLHG+L EEV+M L G++ + S
Subjt: GCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQPPKAS
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| A0A2N9G1Y1 Integrase catalytic domain-containing protein | 6.0e-76 | 45.57 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETF
+++FGCLCFASTL SH+TKF R VF+GYP +K Y+L + + F SRDV+FHE IF F T + T FL S IS T
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETF
Query: SLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPS-QHIHEASPKQSYVSFLRR
P I + +++ + + + P P + P LP F D S H ++ + + +PS HI SP QS S LRR
Subjt: SLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPS-QHIHEASPKQSYVSFLRR
Query: STRATKQPTYLQDFHCHLA---SSSNLPPTPMR---HPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLP
STR K TYLQD+HC LA S++ PPT +PL + Y L+P+ + F LS+ A P +HQA HW++AM EL A+EANNTW++ PLP
Subjt: STRATKQPTYLQDFHCHLA---SSSNLPPTPMR---HPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLP
Query: PKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGY
P KH IGCKWVYK+K K++GS+ERYKARLVAK YTQ+EGLD+ ETFS VAK T+R LL V ++N SL QLDVNNAFLHGDL EEVYM L LG+
Subjt: PKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGY
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| A0A5D3CZP1 Copia protein | 1.2e-79 | 43.88 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETF
+++FG LC+AS+LP +++KF R P VF+GYP MKAY+L+ IE ++ F SRDVIFHE F FH + + LP F LPK F+ H
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFNVDTSLDHGISETF
Query: SLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRRS
T+L P ++ NT T + P+ ++ +D + + + + D+ + SQ + P + + +R+S
Subjt: SLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRRS
Query: TRATKQPTYLQDFHCHLASSSNLPPT--PMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHS
TR TK P+YLQ +HC L ++ + P T ++P+ Y+ Y L+P+++ L + +YH+AV + WR+AM+ EL AME N TWSIVPLP K+S
Subjt: TRATKQPTYLQDFHCHLASSSNLPPT--PMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHS
Query: IGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQP
IGC+WVYKIKHK +GSIERYKARLVAK YTQ+EGLD+ ETFS VAK+VT++ LLT+ VS+ LVQLDVNNAFLHG+LFEEVYMDL LGY+P
Subjt: IGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQP
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| A0A6J1DNP7 uncharacterized protein LOC111022065 | 1.1e-93 | 48.39 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFN-VDTSL----DH-
+++FGCLCF ST P +++KF R VFVGYPP MK Y+L+ IE +RFF SRDVIFHE+IF FH V++ + + P V+PK ++ VDTS DH
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFVLPKLFN-VDTSL----DH-
Query: ------GISETFSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHT--LQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHE
+S T + + T V+ D G P+ +AN + S I + + P + + P L ++ VD + +PS ++
Subjt: ------GISETFSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHT--LQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHE
Query: ASPKQSYVSFLRRSTRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNT
LRRS+R ++P+YL+D+HC L +++ + + +PLQ Y+ Y+ L+ S++ F LS+ ++ PQ+YHQAVPF HWR+AM EL AMEAN+T
Subjt: ASPKQSYVSFLRRSTRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNT
Query: WSIVPLPPKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLL
WS+VPLP + HSIGCKW+YK+KHK++GSIERYKARLVAK YTQ+EGLD+IETFS VAKLVT++VLLT+ VS N +LVQLDVNNAFLHGDLFEEVYMDL L
Subjt: WSIVPLPPKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLL
Query: GYQ
GY+
Subjt: GYQ
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.2e-22 | 25.56 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFL------FHKVTLEDELTNFLPNFVLPKLFNVDTSLDH
+R+FG + + + Q KF ++ +FVGY P ++L+ +F +RDV+ E + F V L+D + NF + T
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFL------FHKVTLEDELTNFLPNFVLPKLFNVDTSLDH
Query: GISETFSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEA----SPK
+E+ DN + + + P + + + TE + + D +Q D S F+++S H++E+ +P
Subjt: GISETFSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEA----SPK
Query: QSYVSFLRRSTR--ATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWS
+S S + PT S L P + +++ + T + +F Y W +A+ TEL A + NNTW+
Subjt: QSYVSFLRRSTR--ATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWS
Query: IVPLPPKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLG
I P K+ + +WV+ +K+ G+ RYKARLVA+ +TQK +D+ ETF+ VA++ + R +L++V+ NL + Q+DV AFL+G L EE+YM L G
Subjt: IVPLPPKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.9e-27 | 26.67 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFV-LPKLFNVDTSLDHGISET
+++FGC FA +TK ++ P +F+GY YRL+ +++ SRDV+F E+ E +PNFV +P N T
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKVTLEDELTNFLPNFV-LPKLFNVDTSLDHGISET
Query: FSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRR
S +++T V ++ E QP V+ + ++ ++ PT Q L SE V+ + P YV
Subjt: FSLDNSTTVVGDRNETSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEASPKQSYVSFLRR
Query: STRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHSI
++P L++ + HP +N + AM+ E+ +++ N T+ +V LP K +
Subjt: STRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHSI
Query: GCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQ
CKWV+K+K + + RYKARLV K + QK+G+DF E FS V K+ +IR +L++ S +L + QLDV AFLHGDL EE+YM+ G++
Subjt: GCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLDVNNAFLHGDLFEEVYMDLLLGYQ
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 3.5e-17 | 39.66 | Show/hide |
Query: SRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIET
++L P + + T++ P+ A+ W AM+ EL A+ N TW +VP P ++ +GCKWV+K K ++G+++R KARLVAK + Q+EG+ F+ET
Subjt: SRLAPSFQTFTLSILANFMPQYYHQAVPFEHWRDAMETELTAMEANNTWSIVPLPPKKHSIGCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIET
Query: FSSVAKLVTIRVLLTV
+S V + TIR +L V
Subjt: FSSVAKLVTIRVLLTV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-34 | 30.82 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLF--HKVTL-------EDELTNFLPNFVLPKLFNVDTS
+R+FGC C+ P +Q K ++ VF+GY AY H++ R + SR V F EN F F + TL + + P+ LP V +
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLF--HKVTL-------EDELTNFLPNFVLPKLFNVDTS
Query: LDHGISETFSLDNSTTVVGDRNE--TSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEAS-
+ S+ RN +S S +++ + P P QP T T S+N + T+ +PSQ S
Subjt: LDHGISETFSLDNSTTVVGDRNE--TSLGQPVSIANNTVLTESTIQPPDLDPLQPPTMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHIHEAS-
Query: PKQSYVSFLRRSTRATKQPTYLQDFHCHLASSSNLPPTPMRH---PLQNYIPYSRLAP------------------SFQTFTLSILANFMPQYYHQAVPF
P QS S +T A+ +S+S PP+ + H PL + + AP + +S+ A P+ QA+
Subjt: PKQSYVSFLRRSTRATKQPTYLQDFHCHLASSSNLPPTPMRH---PLQNYIPYSRLAP------------------SFQTFTLSILANFMPQYYHQAVPF
Query: EHWRDAMETELTAMEANNTWSIVPLPPKKHSI-GCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLD
E WR+AM +E+ A N+TW +VP PP +I GC+W++ K+ ++GS+ RYKARLVAK Y Q+ GLD+ ETFS V K +IR++L V V ++ + QLD
Subjt: EHWRDAMETELTAMEANNTWSIVPLPPKKHSI-GCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQLD
Query: VNNAFLHGDLFEEVYMDLLLGYQPP
VNNAFL G L ++VYM QPP
Subjt: VNNAFLHGDLFEEVYMDLLLGYQPP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.4e-34 | 29.81 | Show/hide |
Query: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKV-----TLEDELTNFLPNFVLPKLFNVDTSLDHG
+++FGC C+ P ++ K ++ F+GY AY HI R +TSR V F E F F T +++ ++ PN+ P + T
Subjt: MRLFGCLCFASTLPSHQTKFSHRTTPVVFVGYPPRMKAYRLFHIEQRRFFTSRDVIFHENIFLFHKV-----TLEDELTNFLPNFVLPKLFNVDTSLDHG
Query: ISETFSLDNSTTVVGDRNETSLGQPVS--------IANNTVLTESTIQPPDLDPLQPP---TMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHI
T + + +G +TS P S ++++ + + S P +P P T QP S + S ++ P+ + +P+
Subjt: ISETFSLDNSTTVVGDRNETSLGQPVS--------IANNTVLTESTIQPPDLDPLQPP---TMHTLQPDDLLPSENVFVDQSTHHHDVEPSCAINPSQHI
Query: HEASPKQSYVSFLRRSTRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAP------------------SFQTFTLSILANFMPQYYHQAVP
+ QS +S S T + + + +SS++ PP P P I + AP ++ S+ AN P+ QA+
Subjt: HEASPKQSYVSFLRRSTRATKQPTYLQDFHCHLASSSNLPPTPMRHPLQNYIPYSRLAP------------------SFQTFTLSILANFMPQYYHQAVP
Query: FEHWRDAMETELTAMEANNTWSIVPLPPKKHSI-GCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQL
+ WR AM +E+ A N+TW +VP PP +I GC+W++ K ++GS+ RYKARLVAK Y Q+ GLD+ ETFS V K +IR++L V V ++ + QL
Subjt: FEHWRDAMETELTAMEANNTWSIVPLPPKKHSI-GCKWVYKIKHKANGSIERYKARLVAKRYTQKEGLDFIETFSSVAKLVTIRVLLTVVVSQNLSLVQL
Query: DVNNAFLHGDLFEEVYMDLLLGYQPP
DVNNAFL G L +EVYM QPP
Subjt: DVNNAFLHGDLFEEVYMDLLLGYQPP
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