| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7532693.1 Integrase catalytic core [Arabidopsis thaliana x Arabidopsis arenosa] | 4.7e-77 | 48.28 | Show/hide |
Query: MFDSLEPT-STMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFS--
+F SL T + V LPTG + + +GTV L IL VL++P+F NLLS+ LT D V F C+IQD IG+G LY++D S
Subjt: MFDSLEPT-STMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFS--
Query: ------NSDGDLVVPSSPTYA---------SAVQRD------------PCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIV
N ++VV SS ++ S + D C ICPLAKQK L F S N +C++AF+L+H D+WGPF+ PT GY YFLTIV
Subjt: ------NSDGDLVVPSSPTYA---------SAVQRD------------PCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIV
Query: DDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFW
DD+TR TW+Y+LR K++VLTI P+F ++ETQ++ +K RSDNAP+L F + F AKG+IH FSC E PEQNSVVERKHQHILNVAR+L FQ+HVP+ +W
Subjt: DDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFW
Query: GECILTTIFLINRIPSHII
GEC+LT +FLINR+P+ ++
Subjt: GECILTTIFLINRIPSHII
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| KAG7574150.1 Integrase catalytic core [Arabidopsis suecica] | 9.6e-78 | 49.04 | Show/hide |
Query: EPTSTMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFSNSDG----
E + V LPTG + + +GTV L IL VL++P+F NLLS+ LT D V F C+IQD IGKG LY++D S D
Subjt: EPTSTMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFSNSDG----
Query: -----DLVVPSS--------PTYASA---------VQRDP----CVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTR
++VV SS P+ A++ QR+ C +CPLAKQK L F S N +CD+AF+L+H DIWGPF+ PT GY YFLTIVDD+TR
Subjt: -----DLVVPSS--------PTYASA---------VQRDP----CVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTR
Query: YTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECIL
TW+Y+L+ KS+VLTI P F K++ETQ++ +K RSDNAP+L F + F AKG++H FSC E PEQNSVVERKHQHILNVAR+L FQ+ VP+ +WGEC+L
Subjt: YTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECIL
Query: TTIFLINRIPSHII
T +FLINR+P+ ++
Subjt: TTIFLINRIPSHII
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| KAG7588381.1 Integrase catalytic core [Arabidopsis suecica] | 8.6e-79 | 49.38 | Show/hide |
Query: MFDSLEPT-STMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLID-----
+F SL T + V LPTG + + +GT L IL VL++P+F NLLS+ LT D V F + C+IQD IG+G LY++D
Subjt: MFDSLEPT-STMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLID-----
Query: ------TFSNSDGDLVVPSSPTYA-----------------SAVQRDP----CVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFL
TFS ++VV SS ++ QR+ C ICPLAKQK L F S N +CD+AF+L+H D+WGPF+ PTH GY YFL
Subjt: ------TFSNSDGDLVVPSSPTYA-----------------SAVQRDP----CVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFL
Query: TIVDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPV
TIVDD+TR TW+Y+LR KS+VLTI P F K++ETQ++ T+K RSDNAP+L F + F AKG+IH FSC E PEQNSVVERKHQHILNVAR+L FQ+HVP+
Subjt: TIVDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPV
Query: HFWGECILTTIFLINRIPSHII
+WGEC+LT +FLINR+P+ ++
Subjt: HFWGECILTTIFLINRIPSHII
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| RVW82526.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.9e-74 | 47.35 | Show/hide |
Query: MFDSLEP-TSTMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTF---
MF S+ +S V LPTG I + +GT+ L +L VL++P F +NL+S+ ALT F+A C IQD K IG GR LYL+D+
Subjt: MFDSLEP-TSTMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTF---
Query: ---------------------------SNSDGDLVVPSSPTYASAVQRDPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTI
SN ++ P ++ C ICPLAKQKRL F +N + + F+LIH DIWGPF PTH G+ YFLTI
Subjt: ---------------------------SNSDGDLVVPSSPTYASAVQRDPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTI
Query: VDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHF
VDD TR TWV++LR KSDV TI PQFF +++T+F TIK RSDNAP+L+ ++ F V+H FSCVE P+QNSVVERKHQHILNVARALYFQS++P+ +
Subjt: VDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHF
Query: WGECILTTIFLINRIPSHIIN
WG+C+LT+++LINRIPS ++N
Subjt: WGECILTTIFLINRIPSHIIN
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| XP_038895765.1 uncharacterized protein LOC120083929 [Benincasa hispida] | 1.8e-76 | 58.57 | Show/hide |
Query: VLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFSNSDGDLVVPSSPTYASAVQRDPCVICPLAKQKRLSFTSNNV
V V EF YNLLS+ ALT D +++V FS C IQ K T KTIGKGR DGL + S L + S PC ICPL KQK+LSF +N
Subjt: VLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFSNSDGDLVVPSSPTYASAVQRDPCVICPLAKQKRLSFTSNNV
Query: ICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVER
F+LIHA+IWGPFS PTH G+ +FLTIVDD++R+TWV+ML+ KS VL IIPQFF +ETQ+ K IK+FRSDNAP+LSF +FFL +GV+HQ+SCV R
Subjt: ICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVER
Query: PEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTIFLINRIPSHII
PEQNSVVERKHQH+LNV+RAL+FQS P+ FW EC+LT ++LINR S I+
Subjt: PEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTIFLINRIPSHII
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z7C0E8 Integrase catalytic domain-containing protein | 1.4e-71 | 46.35 | Show/hide |
Query: FDSLEPTSTMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFSNSD-
F S +P ++ V LP L I V +G+V L + IL+ VLFVP+F +NLLS+ +LT V FS+ C IQ ++TIG GR LYL+ + +S
Subjt: FDSLEPTSTMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFSNSD-
Query: -----------------GDLVVPSSPTYASAVQR--------DPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTR
G + +P +Q C IC L+KQKRL F SNN + D+ F+L+H DIWGPF+ G+ YFLTIVDD++R
Subjt: -----------------GDLVVPSSPTYASAVQR--------DPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTR
Query: YTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECIL
YTWV +L+ KSDV I P F +++ TQF K+IK RSDNAP+L F++FF A+G++ SCVERP+QNS+VERKHQHILNVARAL FQS++P+ +W +CIL
Subjt: YTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECIL
Query: TTIFLINRIPSHIIN
T+++LINR+P+ I++
Subjt: TTIFLINRIPSHIIN
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| A0A438HDI8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-74 | 47.35 | Show/hide |
Query: MFDSLEP-TSTMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTF---
MF S+ +S V LPTG I + +GT+ L +L VL++P F +NL+S+ ALT F+A C IQD K IG GR LYL+D+
Subjt: MFDSLEP-TSTMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTF---
Query: ---------------------------SNSDGDLVVPSSPTYASAVQRDPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTI
SN ++ P ++ C ICPLAKQKRL F +N + + F+LIH DIWGPF PTH G+ YFLTI
Subjt: ---------------------------SNSDGDLVVPSSPTYASAVQRDPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTI
Query: VDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHF
VDD TR TWV++LR KSDV TI PQFF +++T+F TIK RSDNAP+L+ ++ F V+H FSCVE P+QNSVVERKHQHILNVARALYFQS++P+ +
Subjt: VDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHF
Query: WGECILTTIFLINRIPSHIIN
WG+C+LT+++LINRIPS ++N
Subjt: WGECILTTIFLINRIPSHIIN
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| A0A5S9X2Z9 Uncharacterized protein | 9.3e-71 | 47.45 | Show/hide |
Query: MFDSLEPT-STMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFS--
+F +L+ + + V LPTG + ++ VGTV + IL+ VLF+PEF NL+S+ +LT D V+F S C IQD T+G+G+ LY++DT S
Subjt: MFDSLEPT-STMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFS--
Query: ---NSDGDLVV-------PS-----------SPTYASAVQRDPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRY
N+ D+ V PS T + C +C LAKQK+LSF S N IC++ FEL+H D+WGPFS T GY YFLTIVDD++R
Subjt: ---NSDGDLVV-------PS-----------SPTYASAVQRDPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRY
Query: TWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILT
TW+Y+L+ KSDVLT+ P F L+E Q+ +K RSDNA +L+FT+F+ AKG++ SC E PEQNSVVERKHQHILNVARAL FQS++ + +WG+C+LT
Subjt: TWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILT
Query: TIFLINRIPSHIIN
+FLINR PS +++
Subjt: TIFLINRIPSHIIN
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| A0A6D2HMJ4 Integrase catalytic domain-containing protein | 7.6e-73 | 47.56 | Show/hide |
Query: VILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFSNSDG----------
V LPTG+ + + +GTV L +L VLF+P F NLLS+ LT D V+F S C+IQD IG+G LY+ DT + +D
Subjt: VILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFSNSDG----------
Query: --DLVVPSSPTYASAV-------------QRDP---CVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWVYMLR
DL V + A+ QR+ C ICPLAKQK + F S + IC+ F+L+H D WGPFS PT GY YFLTIVDD+TR TWVY++R
Subjt: --DLVVPSSPTYASAV-------------QRDP---CVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWVYMLR
Query: KKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTIFLINR
K +VLT+ P+F K++ETQ+ +K RSDNAP+L F F KG++ SC E PEQNSVVERKHQHILNVARAL FQ+HVP+ +W +C+LT +FLINR
Subjt: KKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTIFLINR
Query: IPSHIIN
+P+ ++N
Subjt: IPSHIIN
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| Q9SIM3 Putative retroelement pol polyprotein | 9.3e-71 | 47.45 | Show/hide |
Query: MFDSLEPT-STMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFS--
+F +L+ + + V LPTG + ++ VGTV + IL+ VLF+PEF NL+S+ +LT D V+F S C IQD T+G+G+ LY++DT S
Subjt: MFDSLEPT-STMVILPTGLCISVNFVGTVTLFGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFS--
Query: ---NSDGDLVV-------PS-----------SPTYASAVQRDPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRY
N+ D+ V PS T + C +C LAKQK+LSF S N IC++ FEL+H D+WGPFS T GY YFLTIVDD++R
Subjt: ---NSDGDLVV-------PS-----------SPTYASAVQRDPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRY
Query: TWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILT
TW+Y+L+ KSDVLT+ P F L+E Q+ +K RSDNA +L+FT+F+ AKG++ SC E PEQNSVVERKHQHILNVARAL FQS++ + +WG+C+LT
Subjt: TWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKLSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILT
Query: TIFLINRIPSHIIN
+FLINR PS +++
Subjt: TIFLINRIPSHIIN
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 6.3e-16 | 29.71 | Show/hide |
Query: CVICPLAKQKRLSF--TSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPK
C C KQ RL F + ++H+D+ GP + T +YF+ VD +T Y Y+++ KSDV ++ F E F + DN +
Subjt: CVICPLAKQKRLSF--TSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPK
Query: L---SFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTIFLINRIPSHII
F + KG+ + + P+ N V ER + I AR + + + FWGE +LT +LINRIPS +
Subjt: L---SFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTIFLINRIPSHII
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-24 | 31.67 | Show/hide |
Query: TYASAVQRDPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKI
+YA PC C KQ R+SF +++ +L+++D+ GP + G YF+T +DD +R WVY+L+ K V + +F L+E + + +K
Subjt: TYASAVQRDPCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWVYMLRKKSDVLTIIPQFFKLMETQFQKTIKI
Query: FRSDNAPKLS---FTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTIFLINRIPS
RSDN + + F ++ + G+ H+ + P+ N V ER ++ I+ R++ + +P FWGE + T +LINR PS
Subjt: FRSDNAPKLS---FTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTIFLINRIPS
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 6.8e-10 | 24.32 | Show/hide |
Query: FELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWVYML--RKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKL---SFTDFFLAKGVIHQFSCVER
F+ +H DI+GP + YF++ D+ TR+ WVY L R++ +L + ++ QF + + + D + + FF +G+ ++
Subjt: FELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWVYML--RKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPKL---SFTDFFLAKGVIHQFSCVER
Query: PEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTIFLINRIPS
+ V ER ++ +LN R L S +P H W + + + N + S
Subjt: PEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTIFLINRIPS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.7e-27 | 27.65 | Show/hide |
Query: VILPTGLCISVNFVGTVTLFGK--PI-LRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFSNSDGDLVV-PS
V++ G I ++ G+ +L K P+ L +L+VP H NL+SV L + V F + ++D T + +G+ D LY S+ L PS
Subjt: VILPTGLCISVNFVGTVTLFGK--PI-LRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLYLIDTFSNSDGDLVV-PS
Query: S---------------PTYASAVQRD-------------PCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWV
S P+ ++V + C C + K ++ F+ + + E I++D+W +H Y Y++ VD +TRYTW+
Subjt: S---------------PTYASAVQRD-------------PCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWV
Query: YMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPK-LSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTI
Y L++KS V F L+E +FQ I F SDN + ++ ++F G+ H S PE N + ERKH+HI+ L + +P +W +
Subjt: YMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPK-LSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTI
Query: FLINRIPSHII
+LINR+P+ ++
Subjt: FLINRIPSHII
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-23 | 26.69 | Show/hide |
Query: VILPTGLCISVNFVGTVTL---FGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLY-----------------
V++ G I + G+ +L L +VL+VP H NL+SV L + V F + ++D T + +G+ D LY
Subjt: VILPTGLCISVNFVGTVTL---FGKPILRRVLFVPEFHYNLLSVGALTMDTSIYVLFSASDCLIQDKFTSKTIGKGRFHDGLY-----------------
Query: LIDTFSNSDGDLVVPSSPTYASAVQRD------------PCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWV
T S+ L PS S + C C + K ++ F+++ + E I++D+W + Y Y++ VD +TRYTW+
Subjt: LIDTFSNSDGDLVVPSSPTYASAVQRD------------PCVICPLAKQKRLSFTSNNVICDTAFELIHADIWGPFSFPTHAGYHYFLTIVDDYTRYTWV
Query: YMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPK-LSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTI
Y L++KS V F L+E +FQ I SDN + + D+ G+ H S PE N + ERKH+HI+ + L + VP +W +
Subjt: YMLRKKSDVLTIIPQFFKLMETQFQKTIKIFRSDNAPK-LSFTDFFLAKGVIHQFSCVERPEQNSVVERKHQHILNVARALYFQSHVPVHFWGECILTTI
Query: FLINRIPSHII
+LINR+P+ ++
Subjt: FLINRIPSHII
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