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Lag0027826 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027826
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:5654479..5655404
RNA-Seq ExpressionLag0027826
SyntenyLag0027826
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021318626.1 uncharacterized protein LOC110436290 [Sorghum bicolor]5.1e-1240.45Show/hide
Query:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEP
        ++ ++    LG+ +G F+EVD+ E+       L+I V +DI +PL RG+ VK+G    E W    YE LP+FCY CG IGH+   C  P
Subjt:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEP

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]6.7e-1239Show/hide
Query:  DLRDTILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEEE
        DL  + L K  A  LG+++G+F +VD  E+  +   +L+I V +DIT+PL+RG+ + I       W+ + YERLP+FCY CG IGH   +C+   L  ++
Subjt:  DLRDTILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEEE

XP_039815069.1 uncharacterized protein LOC120677956 [Panicum virgatum]5.1e-1239.39Show/hide
Query:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECE-EPQLKEEERFT
        ++ K    A+G+ +G+F  +DL+E++      L+I V++DI +PL RG+MV +G +    W  V YE LP+FCY CG IGH    CE E +  E ++F+
Subjt:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECE-EPQLKEEERFT

XP_039815364.1 uncharacterized protein LOC120678302 [Panicum virgatum]8.4e-1544.19Show/hide
Query:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSEC
        ++ K+ A  +G+ LG F EVDLE +E      L++ V+++I +PL+RG+M+ +G  A E W  +TYE LP+FCY CG+IGH    C
Subjt:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSEC

XP_039827601.1 uncharacterized protein LOC120689378 [Panicum virgatum]4.2e-1441.05Show/hide
Query:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEEE
        ++ K+ A  +G+ LG F EVDLE +       L++ V+++I +PL+RG+M+ +G  A E W  +TYE LP+FCY CG+IGH    C      EE+
Subjt:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEEE

TrEMBL top hitse value%identityAlignment
A0A392MB81 Zinc CCHC-type-like protein (Fragment)1.2e-1141.18Show/hide
Query:  LRDTILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEEER
        LR   +AKK    LG++LG+F+E+D++E    G   L+I   +D+ +PLKRG  +K   K  + WV   YERLP FC+ CG+IGH   +CEE +  +E+ 
Subjt:  LRDTILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEEER

Query:  FT
        ++
Subjt:  FT

A0A6J1DU55 uncharacterized protein LOC1110231353.2e-1239Show/hide
Query:  DLRDTILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEEE
        DL  + L K  A  LG+++G+F +VD  E+  +   +L+I V +DIT+PL+RG+ + I       W+ + YERLP+FCY CG IGH   +C+   L  ++
Subjt:  DLRDTILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEEE

A0A6P9EID8 uncharacterized protein LOC1183488565.5e-1245.78Show/hide
Query:  KWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECE
        K    +G+ +G  +EVD E+ E      L+I V+V+I+QPL RG+ VK+G   +  W+R  YERLP FCY CGK+GH + +CE
Subjt:  KWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECE

K3ZNG2 CCHC-type domain-containing protein8.5e-1342.55Show/hide
Query:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEE
        ++ K  A  +GD  G F EVD E ++      L++ V++DI  PL+RG+ V +G    + W  V YE LPEFCY CG IGHV   C +   KEE
Subjt:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEE

K4AML8 CCHC-type domain-containing protein3.2e-1241.49Show/hide
Query:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEE
        ++ K  A  +GD  G F EVD E ++      L++ V++DI  PL+RG+ V +G    + W  V YE LPEFCY CG IGH    C +   KEE
Subjt:  ILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGTACTTCAGGCGGTGATTCTCTCGAGAGAGAAAGAAGTCTGTGAGCAAAAGGGCAGCGCCATGCTGAATATGGGATCCAGCGGTGAGCAAAGCGGTGACCAGAA
CGAAAATCAACACATCACCATGGAAGAAAACAAAGGAACAGAGACCGTTTCGCTAGCAAACGACAACTCAAATGAGATTGGAGAAATGGAAGAAGAAAACAACGCAGAAG
ACGAAGTTCTAAACAAAATGGAGGAACTGAAAATCACAGCAGCGGAGAAAGCTAAGGTGGTTGCCATAGACGACGAGGATCTTGACGAAGCATCAGACGATCTCAGAGAC
ACAATACTTGCAAAGAAATGGGCCACTGCTCTAGGGGACTCGTTAGGAAGCTTTCAGGAGGTGGACTTAGAAGAGGAAGAGAACAATGGGGACAACACTCTGCAGATTCT
TGTAAAAGTTGATATCACCCAACCTCTTAAGAGGGGTCTCATGGTGAAAATAGGATCGAAAGCAACAGAAACTTGGGTGAGAGTGACCTATGAGAGGTTGCCGGAATTCT
GTTATGATTGCGGAAAGATAGGACATGTGAAATCAGAATGTGAAGAACCTCAGCTAAAAGAGGAAGAACGATTTACGGTGAAGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGTACTTCAGGCGGTGATTCTCTCGAGAGAGAAAGAAGTCTGTGAGCAAAAGGGCAGCGCCATGCTGAATATGGGATCCAGCGGTGAGCAAAGCGGTGACCAGAA
CGAAAATCAACACATCACCATGGAAGAAAACAAAGGAACAGAGACCGTTTCGCTAGCAAACGACAACTCAAATGAGATTGGAGAAATGGAAGAAGAAAACAACGCAGAAG
ACGAAGTTCTAAACAAAATGGAGGAACTGAAAATCACAGCAGCGGAGAAAGCTAAGGTGGTTGCCATAGACGACGAGGATCTTGACGAAGCATCAGACGATCTCAGAGAC
ACAATACTTGCAAAGAAATGGGCCACTGCTCTAGGGGACTCGTTAGGAAGCTTTCAGGAGGTGGACTTAGAAGAGGAAGAGAACAATGGGGACAACACTCTGCAGATTCT
TGTAAAAGTTGATATCACCCAACCTCTTAAGAGGGGTCTCATGGTGAAAATAGGATCGAAAGCAACAGAAACTTGGGTGAGAGTGACCTATGAGAGGTTGCCGGAATTCT
GTTATGATTGCGGAAAGATAGGACATGTGAAATCAGAATGTGAAGAACCTCAGCTAAAAGAGGAAGAACGATTTACGGTGAAGGGTTGA
Protein sequenceShow/hide protein sequence
MRVLQAVILSREKEVCEQKGSAMLNMGSSGEQSGDQNENQHITMEENKGTETVSLANDNSNEIGEMEEENNAEDEVLNKMEELKITAAEKAKVVAIDDEDLDEASDDLRD
TILAKKWATALGDSLGSFQEVDLEEEENNGDNTLQILVKVDITQPLKRGLMVKIGSKATETWVRVTYERLPEFCYDCGKIGHVKSECEEPQLKEEERFTVKG