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Lag0027827 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027827
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:5655681..5656813
RNA-Seq ExpressionLag0027827
SyntenyLag0027827
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG53035.1 hypothetical protein EZV62_022204 [Acer yangbiense]4.0e-0541.11Show/hide
Query:  TPERSAALRMKLGRTLQAYRGSSGGLMLYWNKECDLSINSFSKGHIDTTI-RDKDFSWLL--LVSTEIQTQQKNDSWQLLERLSDVNNLP
        TP++  A R K         GSSGGL+L W    D+S+ SFS GHID  +  + DF W         I +++K  SW LL RL +V+NLP
Subjt:  TPERSAALRMKLGRTLQAYRGSSGGLMLYWNKECDLSINSFSKGHIDTTI-RDKDFSWLL--LVSTEIQTQQKNDSWQLLERLSDVNNLP

TXG53188.1 hypothetical protein EZV62_022357 [Acer yangbiense]4.0e-0549.28Show/hide
Query:  GSSGGLMLYWNKECDLSINSFSKGHIDTTIR-DKDFSWLLL-VSTEIQTQQKNDSWQLLERLSDVNNLP
        G SGGLML W K+  ++I SFS GHID  I+ D  F W  L   ++  + ++  SW LL RL DVNNLP
Subjt:  GSSGGLMLYWNKECDLSINSFSKGHIDTTIR-DKDFSWLLL-VSTEIQTQQKNDSWQLLERLSDVNNLP

TXG63812.1 hypothetical protein EZV62_010806 [Acer yangbiense]4.0e-0542.03Show/hide
Query:  GSSGGLMLYWNKECDLSINSFSKGHIDTTIRDKDFSWLLL--VSTEIQTQQKNDSWQLLERLSDVNNLP
        GSSGGL+L WN++C++S+ SFS GHID  I+ +D  W     +  E    ++ + W L+ RL +V+ LP
Subjt:  GSSGGLMLYWNKECDLSINSFSKGHIDTTIRDKDFSWLLL--VSTEIQTQQKNDSWQLLERLSDVNNLP

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.5e-0445.07Show/hide
Query:  AYRGSSGGLMLYWNKECDLSINSFSKGHIDTTIRDKDFSWLLL-VSTEIQTQQKNDSWQLLERLSDVNNLP
        A  G SGGLML WN + ++ I S S GHID+ I DK  SW          T +++ SW+LLERL+ + +LP
Subjt:  AYRGSSGGLMLYWNKECDLSINSFSKGHIDTTIRDKDFSWLLL-VSTEIQTQQKNDSWQLLERLSDVNNLP

XP_030945823.1 uncharacterized protein LOC115970311 [Quercus lobata]8.8e-0538.64Show/hide
Query:  LRMKLGRTLQAY---RGSSGGLMLYWNKECDLSINSFSKGHIDTTIRDKD--FSWLLLVSTE-IQTQQKNDSWQLLERLSDVNNLPGL
        L+MKLG     Y   +G  GGL +YW KE +L I S+S+ HID  + +++  F W L    E ++T Q+ +SW+ L+ L+    LP L
Subjt:  LRMKLGRTLQAY---RGSSGGLMLYWNKECDLSINSFSKGHIDTTIRDKD--FSWLLLVSTE-IQTQQKNDSWQLLERLSDVNNLPGL

TrEMBL top hitse value%identityAlignment
A0A2N9FVE9 Reverse transcriptase domain-containing protein4.3e-0535.34Show/hide
Query:  GYRRRLKFSSAGCNENTMLERSGMGTPERSAALRMKLGRTLQAYRGSSGGLMLYWNKECDLSINSFSKGHIDTTIRD-KDFSWLLL-VSTEIQTQQKNDS
        G  RRL+FS A  NE+  LE SG   P  S+     LG      RGSSGGL L WN   ++ I S+++ HID  I+      W         ++ +  +S
Subjt:  GYRRRLKFSSAGCNENTMLERSGMGTPERSAALRMKLGRTLQAYRGSSGGLMLYWNKECDLSINSFSKGHIDTTIRD-KDFSWLLL-VSTEIQTQQKNDS

Query:  WQLLERLSDVNNLPGLW-----EVFQGQKRRGE
        W LL+RL  ++ LP L      E+   ++R GE
Subjt:  WQLLERLSDVNNLPGLW-----EVFQGQKRRGE

A0A5C7H853 CCHC-type domain-containing protein1.9e-0549.28Show/hide
Query:  GSSGGLMLYWNKECDLSINSFSKGHIDTTIR-DKDFSWLLL-VSTEIQTQQKNDSWQLLERLSDVNNLP
        G SGGLML W K+  ++I SFS GHID  I+ D  F W  L   ++  + ++  SW LL RL DVNNLP
Subjt:  GSSGGLMLYWNKECDLSINSFSKGHIDTTIR-DKDFSWLLL-VSTEIQTQQKNDSWQLLERLSDVNNLP

A0A5C7H981 Uncharacterized protein1.9e-0541.11Show/hide
Query:  TPERSAALRMKLGRTLQAYRGSSGGLMLYWNKECDLSINSFSKGHIDTTI-RDKDFSWLL--LVSTEIQTQQKNDSWQLLERLSDVNNLP
        TP++  A R K         GSSGGL+L W    D+S+ SFS GHID  +  + DF W         I +++K  SW LL RL +V+NLP
Subjt:  TPERSAALRMKLGRTLQAYRGSSGGLMLYWNKECDLSINSFSKGHIDTTI-RDKDFSWLL--LVSTEIQTQQKNDSWQLLERLSDVNNLP

A0A5C7I5K8 DUF4283 domain-containing protein1.9e-0542.03Show/hide
Query:  GSSGGLMLYWNKECDLSINSFSKGHIDTTIRDKDFSWLLL--VSTEIQTQQKNDSWQLLERLSDVNNLP
        GSSGGL+L WN++C++S+ SFS GHID  I+ +D  W     +  E    ++ + W L+ RL +V+ LP
Subjt:  GSSGGLMLYWNKECDLSINSFSKGHIDTTIRDKDFSWLLL--VSTEIQTQQKNDSWQLLERLSDVNNLP

A0A6J1DUG8 uncharacterized protein LOC1110241357.3e-0545.07Show/hide
Query:  AYRGSSGGLMLYWNKECDLSINSFSKGHIDTTIRDKDFSWLLL-VSTEIQTQQKNDSWQLLERLSDVNNLP
        A  G SGGLML WN + ++ I S S GHID+ I DK  SW          T +++ SW+LLERL+ + +LP
Subjt:  AYRGSSGGLMLYWNKECDLSINSFSKGHIDTTIRDKDFSWLLL-VSTEIQTQQKNDSWQLLERLSDVNNLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGGAATGATGGAACTAGAAGAAAGAGAAGACATGACAAGAGAAAGTCAAGAAAAGGACAAAGAACCTTCAAATGAACATGTACGAGTGGACCAAATGGATGT
TAGGATGAGTACAAGGAAAATCCCAAAAATTATGGGCAAAGAGGATCAGTCAAGAGATGGAAAACCAATGGAAAAAAATGAAAAAGCCAAAAGTGGCCCACAAGCGTCAG
GCCAGCTGAGTGGGCTCAAAAAAGAAATGGAAAAGGCCTTAAATCAAAGAGAAGTCAAGGAAAACAAAAGCCAAGACTTGGTTACTGAACAGAAGGATCTTAATCAAGGA
CAAGGCACCAACGCAAGGAAATGGAAGAGAAGAGCCATAGCAGAAAGGAATGAGATGATTACAGAAGAGTCAAAAAGCAAGATGGGCAGTTCTGGAAATTCTGGAAAAAG
AATTTTAGAAGAAGGGGAAGAAAGATCTCGTGAAGCAAAAAAGCAGTGTATGCCTTACTTCGGGGCCAACAAGGGATATCGGCGGAGGCTGAAGTTCAGCTCCGCCGGAT
GCAATGAAAATACTATGCTGGAACGTTCGGGGATGGGAACCCCCGAGCGATCTGCAGCCTTAAGAATGAAATTAGGAAGAACTCTCCAAGCATATAGGGGTTCTAGTGGT
GGGCTGATGCTTTATTGGAATAAGGAGTGTGATCTTTCTATCAACTCCTTTTCCAAGGGCCATATCGACACTACCATTAGAGACAAGGATTTCAGCTGGCTTTTACTGGT
TTCTACGGAGATTCAGACCCAACAAAAGAACGACTCTTGGCAACTTTTGGAACGTCTTAGCGATGTGAATAACCTCCCTGGATTGTGGGAGGTTTTTCAGGGGCAAAAGA
GACGTGGAGAAGAGGGAAGACAACCTCTACCTGAATTAAAGAGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAGGAATGATGGAACTAGAAGAAAGAGAAGACATGACAAGAGAAAGTCAAGAAAAGGACAAAGAACCTTCAAATGAACATGTACGAGTGGACCAAATGGATGT
TAGGATGAGTACAAGGAAAATCCCAAAAATTATGGGCAAAGAGGATCAGTCAAGAGATGGAAAACCAATGGAAAAAAATGAAAAAGCCAAAAGTGGCCCACAAGCGTCAG
GCCAGCTGAGTGGGCTCAAAAAAGAAATGGAAAAGGCCTTAAATCAAAGAGAAGTCAAGGAAAACAAAAGCCAAGACTTGGTTACTGAACAGAAGGATCTTAATCAAGGA
CAAGGCACCAACGCAAGGAAATGGAAGAGAAGAGCCATAGCAGAAAGGAATGAGATGATTACAGAAGAGTCAAAAAGCAAGATGGGCAGTTCTGGAAATTCTGGAAAAAG
AATTTTAGAAGAAGGGGAAGAAAGATCTCGTGAAGCAAAAAAGCAGTGTATGCCTTACTTCGGGGCCAACAAGGGATATCGGCGGAGGCTGAAGTTCAGCTCCGCCGGAT
GCAATGAAAATACTATGCTGGAACGTTCGGGGATGGGAACCCCCGAGCGATCTGCAGCCTTAAGAATGAAATTAGGAAGAACTCTCCAAGCATATAGGGGTTCTAGTGGT
GGGCTGATGCTTTATTGGAATAAGGAGTGTGATCTTTCTATCAACTCCTTTTCCAAGGGCCATATCGACACTACCATTAGAGACAAGGATTTCAGCTGGCTTTTACTGGT
TTCTACGGAGATTCAGACCCAACAAAAGAACGACTCTTGGCAACTTTTGGAACGTCTTAGCGATGTGAATAACCTCCCTGGATTGTGGGAGGTTTTTCAGGGGCAAAAGA
GACGTGGAGAAGAGGGAAGACAACCTCTACCTGAATTAAAGAGAGGCTAG
Protein sequenceShow/hide protein sequence
MAEGMMELEEREDMTRESQEKDKEPSNEHVRVDQMDVRMSTRKIPKIMGKEDQSRDGKPMEKNEKAKSGPQASGQLSGLKKEMEKALNQREVKENKSQDLVTEQKDLNQG
QGTNARKWKRRAIAERNEMITEESKSKMGSSGNSGKRILEEGEERSREAKKQCMPYFGANKGYRRRLKFSSAGCNENTMLERSGMGTPERSAALRMKLGRTLQAYRGSSG
GLMLYWNKECDLSINSFSKGHIDTTIRDKDFSWLLLVSTEIQTQQKNDSWQLLERLSDVNNLPGLWEVFQGQKRRGEEGRQPLPELKRG