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Lag0027828 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027828
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:5657364..5657771
RNA-Seq ExpressionLag0027828
SyntenyLag0027828
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.8e-2447.29Show/hide
Query:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI
        DD GNWV+D   I      +F+ LF++SNP +  I + L+G+  KVS+  N  L  PF   DI  AL  M P+K PG DG+ A FFQ  W IVGE  TK 
Subjt:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI

Query:  CLDILNGTKSARAVNRTLIALIPKVKEPK
        CL ILN   +  ++N T IALIPKV++P+
Subjt:  CLDILNGTKSARAVNRTLIALIPKVKEPK

XP_010684019.1 PREDICTED: uncharacterized protein LOC104898622 [Beta vulgaris subsp. vulgaris]9.7e-2546.88Show/hide
Query:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI
        D+ G W +D   I  + T YF ++F++SNP +    +VL+ I   VS A N +L RPF K +I  A++ M+P K PG DGMHA+F+Q FW I+G+D T  
Subjt:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI

Query:  CLDILNGTKSARAVNRTLIALIPKVKEP
          +IL+G  S   VN T IALIPKVK P
Subjt:  CLDILNGTKSARAVNRTLIALIPKVKEP

XP_010693383.1 PREDICTED: uncharacterized protein LOC104906342 [Beta vulgaris subsp. vulgaris]7.5e-2542.96Show/hide
Query:  MDDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTK
        +D  G W EDE K+ E+  +Y+ +LF+++ P    + +VL+ + R +S   N  LSRP+ K++I  AL+ M+PSK PG DGMHA+FFQ FW IVG+D   
Subjt:  MDDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTK

Query:  ICLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY
        + ++IL+G +     NRT I +IPK+K+P  +  Y
Subjt:  ICLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY

XP_015895368.1 uncharacterized protein LOC107429231 [Ziziphus jujuba]2.2e-2445.52Show/hide
Query:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI
        D +G W ++ V   +V   YF NLFST     D    VL G+  +VS+  N  LSRPF   +++ +L  M+P+K PG DGM A+FFQ +W IVG   T+ 
Subjt:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI

Query:  CLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY
        CLD+LN       VN TLIALIPK+KEP+ + +Y
Subjt:  CLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY

XP_023906330.1 uncharacterized protein LOC112018052 [Quercus suber]8.8e-2642.42Show/hide
Query:  IGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKICL
        +G W  DE +I ++A EYF++LF++S P++D + +VLE + R+V++  N  L  P+   +I  AL  M+PSK PG DGM   FFQ FW+IVG D T   L
Subjt:  IGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKICL

Query:  DILNGTKSARAVNRTLIALIPKVKEPKGMGNY
         +LN     R +N T I L+PK  +P  +G++
Subjt:  DILNGTKSARAVNRTLIALIPKVKEPKGMGNY

TrEMBL top hitse value%identityAlignment
A0A2N9GPZ7 Reverse transcriptase domain-containing protein3.6e-2543.28Show/hide
Query:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI
        D  G W  ++ KI E+A +YF+ +F++SNP  + I  VL+G+   V+ A N++L   F K ++  ALK M P+K PG DGM A+F+Q +WDIVG + T+ 
Subjt:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI

Query:  CLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY
         L IL+     R +N T IALIPKVK P+ + ++
Subjt:  CLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY

A0A2N9IPS8 Reverse transcriptase domain-containing protein3.6e-2543.28Show/hide
Query:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI
        D  G W  ++ KI E+A +YF+ +F++SNP  + I  VL+G+   V+ A N++L   F K ++  ALK M P+K PG DGM A+F+Q +WDIVG + T+ 
Subjt:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI

Query:  CLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY
         L IL+     R +N T IALIPKVK P+ + ++
Subjt:  CLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY

A0A6P4B957 uncharacterized protein LOC1074292311.0e-2445.52Show/hide
Query:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI
        D +G W ++ V   +V   YF NLFST     D    VL G+  +VS+  N  LSRPF   +++ +L  M+P+K PG DGM A+FFQ +W IVG   T+ 
Subjt:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI

Query:  CLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY
        CLD+LN       VN TLIALIPK+KEP+ + +Y
Subjt:  CLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY

A0A6P9EBC5 uncharacterized protein LOC1183480203.1e-2445.19Show/hide
Query:  MDDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTK
        +DD G     +V++ E    YF+ LFSTSNP    + K L+ I  +V+   N KLSRPF K +IE  +K+M P K+PG DG  A F+QN W  VG+    
Subjt:  MDDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTK

Query:  ICLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY
          LD+LNG  S  +VN T I LIPK K+PK +  Y
Subjt:  ICLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY

A0A803Q8X4 Uncharacterized protein1.4e-2443.28Show/hide
Query:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI
        DD   W     KI E++  YF+NLFS SN   ++   +   +  ++S  +N KL  PF ++D++ AL  ++P K PG+DG+ ++FFQ  WDIVG D T+ 
Subjt:  DDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKI

Query:  CLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY
        CL+ILN  K  R++N TLI LIPKVK+P  M  +
Subjt:  CLDILNGTKSARAVNRTLIALIPKVKEPKGMGNY

SwissProt top hitse value%identityAlignment
P14381 Transposon TX1 uncharacterized 149 kDa protein4.1e-1029.75Show/hide
Query:  GNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKICLD
        G  +ED   I + A  +++NLFS      D   ++ +G+   VSE +  +L  P    ++  AL+ M  +K+PG DG+   FFQ FWD +G D  ++  +
Subjt:  GNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKICLD

Query:  ILNGTKSARAVNRTLIALIPK
             +   +  R +++L+PK
Subjt:  ILNGTKSARAVNRTLIALIPK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATATCGGGAATTGGGTTGAAGATGAAGTGAAGATAGGAGAGGTTGCCACCGAATACTTTAAAAACTTGTTCTCCACATCAAATCCAAAAGAGGACATCATTTG
TAAAGTTTTGGAGGGCATTACCAGGAAAGTCTCAGAAGCTCAAAATAACAAACTCTCCAGACCTTTTATAAAGAGTGATATAGAAGGAGCTCTAAAAAATATGAACCCCT
CCAAGACACCGGGTGAAGATGGAATGCATGCCATGTTCTTTCAAAATTTTTGGGATATAGTTGGGGAAGATACCACAAAGATCTGTTTGGACATTTTAAATGGGACAAAG
AGCGCAAGGGCAGTCAATAGAACTCTAATAGCTCTTATTCCGAAAGTCAAGGAGCCAAAAGGGATGGGGAACTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATATCGGGAATTGGGTTGAAGATGAAGTGAAGATAGGAGAGGTTGCCACCGAATACTTTAAAAACTTGTTCTCCACATCAAATCCAAAAGAGGACATCATTTG
TAAAGTTTTGGAGGGCATTACCAGGAAAGTCTCAGAAGCTCAAAATAACAAACTCTCCAGACCTTTTATAAAGAGTGATATAGAAGGAGCTCTAAAAAATATGAACCCCT
CCAAGACACCGGGTGAAGATGGAATGCATGCCATGTTCTTTCAAAATTTTTGGGATATAGTTGGGGAAGATACCACAAAGATCTGTTTGGACATTTTAAATGGGACAAAG
AGCGCAAGGGCAGTCAATAGAACTCTAATAGCTCTTATTCCGAAAGTCAAGGAGCCAAAAGGGATGGGGAACTACTGA
Protein sequenceShow/hide protein sequence
MDDIGNWVEDEVKIGEVATEYFKNLFSTSNPKEDIICKVLEGITRKVSEAQNNKLSRPFIKSDIEGALKNMNPSKTPGEDGMHAMFFQNFWDIVGEDTTKICLDILNGTK
SARAVNRTLIALIPKVKEPKGMGNY