| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.9e-97 | 45.15 | Show/hide |
Query: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
M+HFN AEVNG IDE++QVSFI++SLPKSF+ F+TN+ +NKIE+NLTTL+NELQ +Q+LT KG+E EAN+ V+ + F+RGS+S K G Q
Subjt: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
Query: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA------------------------------------------KAAKL
+KK KGK KAP T K KKNADKG CFH N+DGHW+RNCPKYLAEKKA+KA K K
Subjt: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA------------------------------------------KAAKL
Query: GEVTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGKKRNPRLSSHARSSVLRGVRSSSVRGLRTPVRHR---LCSTMFVRPQNSVKFKPSNPM
GE+TL+VG G+VVSAEAVG L L F+D Y++L++VL + KRN L S A +L + + S + + +CS +R N K +P+
Subjt: GEVTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGKKRNPRLSSHARSSVLRGVRSSSVRGLRTPVRHR---LCSTMFVRPQNSVKFKPSNPM
Query: LIL-------FPPSSRVATVSHFPFRFLLLLP--TVRSLQRCPLCVFL--LQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVF
++L ++ VS + + L L + ++R L L+ + PP C + R + RAK L V S +
Subjt: LIL-------FPPSSRVATVSHFPFRFLLLLP--TVRSLQRCPLCVFL--LQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVF
Query: G----------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQN
G ++ F D R L H S++ EKFKEYKAEV+N++ KT +T RSDRGGEYMD +FQDYLIE GI SQLSAP PQQN
Subjt: G----------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQN
Query: GVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
GVSERRNRTLLDMVRSMMSYAQLPDSFWG+ +E ++ILN VPSKSV ETPY+LW+G K SLR+FRI
Subjt: GVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-93 | 43.87 | Show/hide |
Query: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
MVHFN AE+NG VIDE+SQVSFI+ESLP+SF+QFR+N+VMNKI Y LTTL+NELQT++SL K KGQ+ EAN+ S + F RGS SGTKS +S NK +
Subjt: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
Query: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
KK K K KK A KG CFH N++GHW+RNCPKYLAEKK K + + GE
Subjt: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
Query: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
+T+RVG G VVSA AVG L+L + S++LLENV + + + +++ L+ + + GV S + V L S + +
Subjt: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
Query: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
N L + P + A + H + L R ++ L L+ + P C + R + RAK L V S + G
Subjt: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
Query: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
++ F D R ++ H S+ALEKFKEYKAEV+N L KT +T RSDRGGEYMDL+FQ+YL+E GI SQLSAPG PQQNGVSE
Subjt: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
Query: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
RRNRTLLDMVRSMMSYA LP+SFWG+ ++ VYILN VPSKSV ETP KLW G KGSLRHFRI
Subjt: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-93 | 43.87 | Show/hide |
Query: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
MVHFN AE+NG VIDE+SQVSFI+ESLP+SF+QFR+N+VMNKI Y LTTL+NELQT++SL K KGQ+ EAN+ S + F RGS SGTKS +S NK +
Subjt: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
Query: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
KK K K KK A KG CFH N++GHW+RNCPKYLAEKK K + + GE
Subjt: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
Query: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
+T+RVG G VVSA AVG L+L + S++LLENV + + + +++ L+ + + GV S + V L S + +
Subjt: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
Query: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
N L + P + A + H + L R ++ L L+ + P C + R + RAK L V S + G
Subjt: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
Query: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
++ F D R ++ H S+ALEKFKEYKAEV+N L KT +T RSDRGGEYMDL+FQ+YL+E GI SQLSAPG PQQNGVSE
Subjt: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
Query: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
RRNRTLLDMVRSMMSYA LP+SFWG+ ++ VYILN VPSKSV ETP KLW G KGSLRHFRI
Subjt: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-93 | 43.87 | Show/hide |
Query: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
MVHFN AE+NG VIDE+SQVSFI+ESLP+SF+QFR+N+VMNKI Y LTTL+NELQT++SL K KGQ+ EAN+ S + F RGS SGTKS +S NK +
Subjt: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
Query: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
KK K K KK A KG CFH N++GHW+RNCPKYLAEKK K + + GE
Subjt: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
Query: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
+T+RVG G VVSA AVG L+L + S++LLENV + + + +++ L+ + + GV S + V L S + +
Subjt: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
Query: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
N L + P + A + H + L R ++ L L+ + P C + R + RAK L V S + G
Subjt: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
Query: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
++ F D R ++ H S+ALEKFKEYKAEV+N L KT +T RSDRGGEYMDL+FQ+YL+E GI SQLSAPG PQQNGVSE
Subjt: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
Query: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
RRNRTLLDMVRSMMSYA LP+SFWG+ ++ VYILN VPSKSV ETP KLW G KGSLRHFRI
Subjt: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-93 | 43.87 | Show/hide |
Query: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
MVHFN AE+NG VIDE+SQVSFI+ESLP+SF+QFR+N+VMNKI Y LTTL+NELQT++SL K KGQ+ EAN+ S + F RGS SGTKS +S NK +
Subjt: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
Query: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
KK K K KK A KG CFH N++GHW+RNCPKYLAEKK K + + GE
Subjt: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
Query: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
+T+RVG G VVSA AVG L+L + S++LLENV + + + +++ L+ + + GV S + V L S + +
Subjt: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
Query: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
N L + P + A + H + L R ++ L L+ + P C + R + RAK L V S + G
Subjt: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
Query: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
++ F D R ++ H S+ALEKFKEYKAEV+N L KT +T RSDRGGEYMDL+FQ+YL+E GI SQLSAPG PQQNGVSE
Subjt: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
Query: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
RRNRTLLDMVRSMMSYA LP+SFWG+ ++ VYILN VPSKSV ETP KLW G KGSLRHFRI
Subjt: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.8e-93 | 43.87 | Show/hide |
Query: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
MVHFN AE+NG VIDE+SQVSFI+ESLP+SF+QFR+N+VMNKI Y LTTL+NELQT++SL K KGQ+ EAN+ S + F RGS SGTKS +S NK +
Subjt: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
Query: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
KK K K KK A KG CFH N++GHW+RNCPKYLAEKK K + + GE
Subjt: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
Query: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
+T+RVG G VVSA AVG L+L + S++LLENV + + + +++ L+ + + GV S + V L S + +
Subjt: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
Query: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
N L + P + A + H + L R ++ L L+ + P C + R + RAK L V S + G
Subjt: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
Query: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
++ F D R ++ H S+ALEKFKEYKAEV+N L KT +T RSDRGGEYMDL+FQ+YL+E GI SQLSAPG PQQNGVSE
Subjt: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
Query: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
RRNRTLLDMVRSMMSYA LP+SFWG+ ++ VYILN VPSKSV ETP KLW G KGSLRHFRI
Subjt: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
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| A0A5A7TWB9 Gag/pol protein | 1.8e-93 | 43.87 | Show/hide |
Query: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
MVHFN AE+NG VIDE+SQVSFI+ESLP+SF+QFR+N+VMNKI Y LTTL+NELQT++SL K KGQ+ EAN+ S + F RGS SGTKS +S NK +
Subjt: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
Query: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
KK K K KK A KG CFH N++GHW+RNCPKYLAEKK K + + GE
Subjt: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
Query: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
+T+RVG G VVSA AVG L+L + S++LLENV + + + +++ L+ + + GV S + V L S + +
Subjt: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
Query: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
N L + P + A + H + L R ++ L L+ + P C + R + RAK L V S + G
Subjt: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
Query: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
++ F D R ++ H S+ALEKFKEYKAEV+N L KT +T RSDRGGEYMDL+FQ+YL+E GI SQLSAPG PQQNGVSE
Subjt: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
Query: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
RRNRTLLDMVRSMMSYA LP+SFWG+ ++ VYILN VPSKSV ETP KLW G KGSLRHFRI
Subjt: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
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| A0A5A7V4M1 Gag/pol protein | 1.8e-93 | 43.87 | Show/hide |
Query: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
MVHFN AE+NG VIDE+SQVSFI+ESLP+SF+QFR+N+VMNKI Y LTTL+NELQT++SL K KGQ+ EAN+ S + F RGS SGTKS +S NK +
Subjt: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
Query: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
KK K K KK A KG CFH N++GHW+RNCPKYLAEKK K + + GE
Subjt: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
Query: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
+T+RVG G VVSA AVG L+L + S++LLENV + + + +++ L+ + + GV S + V L S + +
Subjt: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
Query: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
N L + P + A + H + L R ++ L L+ + P C + R + RAK L V S + G
Subjt: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
Query: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
++ F D R ++ H S+ALEKFKEYKAEV+N L KT +T RSDRGGEYMDL+FQ+YL+E GI SQLSAPG PQQNGVSE
Subjt: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
Query: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
RRNRTLLDMVRSMMSYA LP+SFWG+ ++ VYILN VPSKSV ETP KLW G KGSLRHFRI
Subjt: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
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| A0A5D3CPJ6 Gag/pol protein | 1.8e-93 | 43.87 | Show/hide |
Query: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
MVHFN AE+NG VIDE+SQVSFI+ESLP+SF+QFR+N+VMNKI Y LTTL+NELQT++SL K KGQ+ EAN+ S + F RGS SGTKS +S NK +
Subjt: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
Query: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
KK K K KK A KG CFH N++GHW+RNCPKYLAEKK K + + GE
Subjt: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA----------------------------------------KAAKLGE
Query: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
+T+RVG G VVSA AVG L+L + S++LLENV + + + +++ L+ + + GV S + V L S + +
Subjt: VTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGK---------KRNPRLSSHARSSVL--RGVRSSSVR-GLRTPVRHRLCSTMFVRPQNSVK
Query: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
N L + P + A + H + L R ++ L L+ + P C + R + RAK L V S + G
Subjt: FKPSNPMLILFPPSSRVATVSHFPFRFLLLLPTVRSLQRCPLCVFLLQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVFG---
Query: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
++ F D R ++ H S+ALEKFKEYKAEV+N L KT +T RSDRGGEYMDL+FQ+YL+E GI SQLSAPG PQQNGVSE
Subjt: -------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSE
Query: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
RRNRTLLDMVRSMMSYA LP+SFWG+ ++ VYILN VPSKSV ETP KLW G KGSLRHFRI
Subjt: RRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
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| E2GK51 Gag/pol protein (Fragment) | 9.0e-98 | 45.15 | Show/hide |
Query: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
M+HFN AEVNG IDE++QVSFI++SLPKSF+ F+TN+ +NKIE+NLTTL+NELQ +Q+LT KG+E EAN+ V+ + F+RGS+S K G Q
Subjt: MVHFNAAEVNGTVIDESSQVSFIMESLPKSFIQFRTNSVMNKIEYNLTTLMNELQTYQSLTKGKGQENEANI-VSGKNFLRGSNSGTKSGSFTSNNKSIQ
Query: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA------------------------------------------KAAKL
+KK KGK KAP T K KKNADKG CFH N+DGHW+RNCPKYLAEKKA+KA K K
Subjt: LKKKKNKGKRKAPITKKGKKKNADKGTCFHYNEDGHWRRNCPKYLAEKKAQKA------------------------------------------KAAKL
Query: GEVTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGKKRNPRLSSHARSSVLRGVRSSSVRGLRTPVRHR---LCSTMFVRPQNSVKFKPSNPM
GE+TL+VG G+VVSAEAVG L L F+D Y++L++VL + KRN L S A +L + + S + + +CS +R N K +P+
Subjt: GEVTLRVGAGDVVSAEAVGALQLLFRDSYILLENVLEIKEKGKKRNPRLSSHARSSVLRGVRSSSVRGLRTPVRHR---LCSTMFVRPQNSVKFKPSNPM
Query: LIL-------FPPSSRVATVSHFPFRFLLLLP--TVRSLQRCPLCVFL--LQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVF
++L ++ VS + + L L + ++R L L+ + PP C + R + RAK L V S +
Subjt: LIL-------FPPSSRVATVSHFPFRFLLLLP--TVRSLQRCPLCVFL--LQPAAAPPHLWRRRRACSGDIRDH-GGRQYNYDSARAKGDFRLVVFSVVF
Query: G----------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQN
G ++ F D R L H S++ EKFKEYKAEV+N++ KT +T RSDRGGEYMD +FQDYLIE GI SQLSAP PQQN
Subjt: G----------NFWCLFKVDGLRQSSPLSLRPLSCLDIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQN
Query: GVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
GVSERRNRTLLDMVRSMMSYAQLPDSFWG+ +E ++ILN VPSKSV ETPY+LW+G K SLR+FRI
Subjt: GVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSVPETPYKLWRGHKGSLRHFRI
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.9e-16 | 37.86 | Show/hide |
Query: DRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSV---PETPYKLWRGHKGSLRH
D G EY+ + + ++ GI+ L+ P PQ NGVSER RT+ + R+M+S A+L SFWG + Y++N +PS+++ +TPY++W K L+H
Subjt: DRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNMVPSKSV---PETPYKLWRGHKGSLRH
Query: FRI
R+
Subjt: FRI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.1e-21 | 37.01 | Show/hide |
Query: KALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNM
+ + F+++ A V+ + + + RSD GGEY F++Y HGI + + PG PQ NGV+ER NRT+++ VRSM+ A+LP SFWG ++ Y++N
Subjt: KALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILNM
Query: VPSKSVP-ETPYKLWRGHKGSLRHFRI
PS + E P ++W + S H ++
Subjt: VPSKSVP-ETPYKLWRGHKGSLRHFRI
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| Q07163 Transposon TyH3 Gag-Pol polyprotein | 7.1e-07 | 29.63 | Show/hide |
Query: DIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADV
D L+ F A +KN+ + + DRG EY + +L ++GIT + + +GV+ER NRTLLD R+ + + LP+ W +E
Subjt: DIHSSKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADV
Query: YILNMVPS
+ N + S
Subjt: YILNMVPS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.6e-11 | 30.7 | Show/hide |
Query: SKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILN
S+ E F +K ++N+ T SD GGE++ L +Y +HGI+ S P P+ NG+SER++R +++ +++S+A +P ++W + VY++N
Subjt: SKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILN
Query: MVPSKSVP-ETPYK
+P+ + E+P++
Subjt: MVPSKSVP-ETPYK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-13 | 35.58 | Show/hide |
Query: SKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILN
S+ + F +K+ V+N+ T SD GGE++ LR DYL +HGI+ S P P+ NG+SER++R +++M +++S+A +P ++W + VY++N
Subjt: SKALEKFKEYKAEVKNKLCKTFRTPRSDRGGEYMDLRFQDYLIEHGITSQLSAPGIPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGFTMEADVYILN
Query: MVPS
+P+
Subjt: MVPS
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