; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027846 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027846
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:6002357..6003769
RNA-Seq ExpressionLag0027846
SyntenyLag0027846
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8492848.1 hypothetical protein CXB51_010174 [Gossypium anomalum]2.1e-0632Show/hide
Query:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG
        P+ +  P +   +L  + E L L  Q KFQ  T + +Q++  QI++LA TV +LE                                     K++K K+ 
Subjt:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG

Query:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK
         SLK +  K+SPT  + I     P  +  ++ +  PFP RLA   + +K++EEK +LD+FKKVE+NI LLD +RK
Subjt:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK

XP_017613919.1 PREDICTED: uncharacterized protein LOC108459066 [Gossypium arboreum]3.2e-0732Show/hide
Query:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG
        P+ +  P +T  +L  + E L +  Q KFQ  T + +Q++  QI++LA TV +LE                                     K++K K+ 
Subjt:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG

Query:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK
         SLK +  K+SPT  + I     P L+  ++ +  PFP RLA   + +K+++EK +LD+FKKVE+NI LLD +RK
Subjt:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK

XP_019149873.1 PREDICTED: uncharacterized protein LOC109146677 [Ipomoea nil]9.2e-0736.69Show/hide
Query:  PYRTRDNL-TNLGEIL--ILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEIKLKKKKKG-RSLKKRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPS
        P ++  NL T+L +I+  +     +FQ+ T T IQ L +Q+++LA TV++LE + K   +   + K+  +  P  +  +          KS V   PFPS
Subjt:  PYRTRDNL-TNLGEIL--ILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEIKLKKKKKG-RSLKKRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPS

Query:  RLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRKFLR
        RLA   K  K +EEK +L+ F+KVEVNI LLDA+++  R
Subjt:  RLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRKFLR

XP_021722563.1 uncharacterized protein LOC110690043 [Chenopodium quinoa]4.6e-0632.45Show/hide
Query:  DGQLKFQEGTHTGIQQLGTQIAKLADTVAKL------------EIKLKKKKKGRSLKKRRKTSPTFLRSIGVHFN--------------PPL-------N
        D  L FQ+ T +G++ L  Q+++LA+TV KL            E  LK+     SL+  +K      ++ G+  +              PP        N
Subjt:  DGQLKFQEGTHTGIQQLGTQIAKLADTVAKL------------EIKLKKKKKGRSLKKRRKTSPTFLRSIGVHFN--------------PPL-------N

Query:  LKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRKFLR
           F S  PFPSRL+ ++K    ++EK  LD+F+KVEVNI LL+A+R+  R
Subjt:  LKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRKFLR

XP_021745243.1 LOW QUALITY PROTEIN: uncharacterized protein LOC110711169 [Chenopodium quinoa]5.4e-0729.59Show/hide
Query:  SQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEIKLKKKKKGRSLKKRRKTSPTFLRS------------------------
        SQP     +L ++ + +  D  L FQ+ T +G++ L  Q+++L++TV KL+ +   K   +  + R   S   LRS                        
Subjt:  SQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEIKLKKKKKGRSLKKRRKTSPTFLRS------------------------

Query:  --------IGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRKFLR
                  V +    N   F S  PFPSRL+ ++K  ++++EK  LD+F+KVEVNI LL+A+R+  R
Subjt:  --------IGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRKFLR

TrEMBL top hitse value%identityAlignment
A0A1U8IEA8 uncharacterized protein LOC1078958222.9e-0630.86Show/hide
Query:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG
        P+ +  P +T  +L  + E L +  Q KFQ  T + +Q++  QI++LA T+ +LE                                     K++K K+ 
Subjt:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG

Query:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK
         SLK +  K+SPT  + I     P  +  ++ +  PFP RLA   + +K++EEK +LD+FK VE+NI LLD +RK
Subjt:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK

A0A1U8P9X9 uncharacterized protein LOC1079558073.8e-0630.86Show/hide
Query:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG
        P+ +  P +T  +L  + E L +  Q KFQ  T + +Q++  QI++LA TV +LE                                     K++K K+ 
Subjt:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG

Query:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK
         SLK +  K+SPT  + I     P  +  ++ +  PFP +LA   +  K++EEK +LD+FKKVE+NI LLD ++K
Subjt:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK

A0A6P4M206 uncharacterized protein LOC1084590661.5e-0732Show/hide
Query:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG
        P+ +  P +T  +L  + E L +  Q KFQ  T + +Q++  QI++LA TV +LE                                     K++K K+ 
Subjt:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG

Query:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK
         SLK +  K+SPT  + I     P L+  ++ +  PFP RLA   + +K+++EK +LD+FKKVE+NI LLD +RK
Subjt:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK

A0A6P4N313 uncharacterized protein LOC1084623472.2e-0630.86Show/hide
Query:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG
        P+ +  P +T  +L  + E L +  Q KFQ  T + +Q++  QI++LA TV +LE                                     K++K K+ 
Subjt:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG

Query:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK
         SLK +  K+SPT  + I     P  +L ++ +  PFP +LA   +  K+++EK +LD+FKKVE+NI LLD ++K
Subjt:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK

A0A6P4PQT0 uncharacterized protein LOC1084754421.4e-0530.86Show/hide
Query:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG
        P    +PY   DN  N           KFQ  T + +Q++  QI++LA TV  LE                                     K++K K+ 
Subjt:  PYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEI------------------------------------KLKKKKKG

Query:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK
         SLK +  K+SPT  + I     P  +  ++ +  PFP +LA   +  K++EEK +LD+FKKVE+NI LLD +RK
Subjt:  RSLK-KRRKTSPTFLRSIGVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGAGGATTAGCCCAGACAACGAGGACATGCCACAGATGATTGCCCGACTTTGCAGCGGAGTCCTCCATTCGAAGCAAATTCCATACGAGGATTCCCAGCCATA
TAGAACCAGAGATAATTTGACCAATTTGGGAGAAATTCTTATCCTAGACGGTCAACTCAAATTTCAGGAGGGGACCCATACTGGGATACAACAACTAGGGACCCAAATCG
CCAAGTTGGCTGACACTGTCGCTAAATTGGAGATTAAGTTGAAGAAGAAAAAGAAAGGAAGAAGCCTGAAAAAGAGAAGAAAGACGAGTCCGACTTTTCTAAGAAGCATT
GGGGTACACTTCAATCCTCCTTTAAATTTAAAATCTTTTGTTTCTAGAGCTCCTTTTCCTAGTAGGTTAGCGCTGCAGTCTAAGCCTTCCAAGGAAGATGAGGAGAAGAA
CGTGCTTGACTTGTTCAAGAAGGTGGAGGTCAACATCCTACTGTTGGACGCCTTAAGGAAATTTCTAAGGAAAAGTGACATAAGGCTTCAAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGAGGATTAGCCCAGACAACGAGGACATGCCACAGATGATTGCCCGACTTTGCAGCGGAGTCCTCCATTCGAAGCAAATTCCATACGAGGATTCCCAGCCATA
TAGAACCAGAGATAATTTGACCAATTTGGGAGAAATTCTTATCCTAGACGGTCAACTCAAATTTCAGGAGGGGACCCATACTGGGATACAACAACTAGGGACCCAAATCG
CCAAGTTGGCTGACACTGTCGCTAAATTGGAGATTAAGTTGAAGAAGAAAAAGAAAGGAAGAAGCCTGAAAAAGAGAAGAAAGACGAGTCCGACTTTTCTAAGAAGCATT
GGGGTACACTTCAATCCTCCTTTAAATTTAAAATCTTTTGTTTCTAGAGCTCCTTTTCCTAGTAGGTTAGCGCTGCAGTCTAAGCCTTCCAAGGAAGATGAGGAGAAGAA
CGTGCTTGACTTGTTCAAGAAGGTGGAGGTCAACATCCTACTGTTGGACGCCTTAAGGAAATTTCTAAGGAAAAGTGACATAAGGCTTCAAGATTAA
Protein sequenceShow/hide protein sequence
MAERISPDNEDMPQMIARLCSGVLHSKQIPYEDSQPYRTRDNLTNLGEILILDGQLKFQEGTHTGIQQLGTQIAKLADTVAKLEIKLKKKKKGRSLKKRRKTSPTFLRSI
GVHFNPPLNLKSFVSRAPFPSRLALQSKPSKEDEEKNVLDLFKKVEVNILLLDALRKFLRKSDIRLQD