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Lag0027860 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027860
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:6165885..6166548
RNA-Seq ExpressionLag0027860
SyntenyLag0027860
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017245464.1 PREDICTED: uncharacterized protein LOC108217127 [Daucus carota subsp. sativus]1.2e-1134.74Show/hide
Query:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIR
        +Y+F+F  K D +W+  NGPW FD  +L  +   A     +    +VEFW+ +++LP SF  + V  ++GN  G FV +D+  N S W   +R++
Subjt:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]5.0e-1342.71Show/hide
Query:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFD-NEKNESFWGTSVRIR
        +++F F  + D   + + GPW FDK L+ L  P ++    E  F +V FW+ LF+LP+S+ NK +  ++GN +G+FVD D NEK  S WG S+RIR
Subjt:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFD-NEKNESFWGTSVRIR

XP_027060738.1 uncharacterized protein LOC113687293 [Coffea arabica]7.3e-1240Show/hide
Query:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIR
        +++FKF D  DK+ +   GPW FD NLL + D   NV S         FW+ ++NLPLS+ N    E +GNKLG +  F+   +   WG  +RIR
Subjt:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIR

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]7.3e-1240Show/hide
Query:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIR
        +++F F    DK  +  +GPW FDK+LL L +   NV   +    +V+FW+ + NLPL   NK V E +GN +G F+D D E     WG ++RIR
Subjt:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIR

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]1.2e-1140Show/hide
Query:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIR
        +++F F    DK  +  NGPW FDK+LL L +   NV   +     V+FW+ + NLPL   NK V + +GN +G F+D D E     WG ++RIR
Subjt:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIR

TrEMBL top hitse value%identityAlignment
A0A2K3KY15 Cysteine desulfurase mitochondrial-like2.3e-1127.37Show/hide
Query:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIRDMCAE
        +Y+F+F  K D + +  NGPW FDKN + L          E    K+ FW+ +++LPL  R+  + +KIG+ +G   +  N     + G  +++ D   +
Subjt:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIRDMCAE

Query:  EKN--KEMIASNNYEFGAWLRFQ---AFGRPTQKPDDQANGMKNNFS-------KSLETEVQKEKDLEENVAMVGDEYQ
        E+N  +  +    Y FG WLR      F    +K    ++  K  F+       + LET   +  ++E+N  +V DE +
Subjt:  EKN--KEMIASNNYEFGAWLRFQ---AFGRPTQKPDDQANGMKNNFS-------KSLETEVQKEKDLEENVAMVGDEYQ

A0A2K3PMS8 Cysteine desulfurase mitochondrial-like6.6e-1127.27Show/hide
Query:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNE---------------
        +++F+F  K D E + RNGPW FD+N++ L     +    +      EFW  +++LPL  R+  +  K+G+ LG FV+ DN+++                
Subjt:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNE---------------

Query:  ---------SFWGTSVRI------------------------RDMCAEEKNK-EMIASNNYEFGAWLRFQAFGRPT---QKPDDQANGMKNNF---SKSL
                  F G S+RI                         DM  +++ + E I      FG WLR     + T   +K     +  KN F   S+S 
Subjt:  ---------SFWGTSVRI------------------------RDMCAEEKNK-EMIASNNYEFGAWLRFQAFGRPT---QKPDDQANGMKNNF---SKSL

Query:  ETEVQKEKDLEENVAMVGDE
        E  V+KEK LE    MV  E
Subjt:  ETEVQKEKDLEENVAMVGDE

A0A5C7IT69 Uncharacterized protein1.0e-1127.78Show/hide
Query:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRI----RD
        ++MF F ++ ++  I + GPW FDK+L+ L+ P       +  F KVE W+ + ++P+   NK + + +  +LG  VD   E  +  WG  +RI    +D
Subjt:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRI----RD

Query:  MCAEEKNKEMIASNNYEFGAWLRFQAFGRPTQKPDDQANGMKNNFSKSLETEVQKEKDLEEN
           EE   + + S+  ++G+W+R     R   + D Q +G     +  +E      +D +EN
Subjt:  MCAEEKNKEMIASNNYEFGAWLRFQAFGRPTQKPDDQANGMKNNFSKSLETEVQKEKDLEEN

A0A6J1DU55 uncharacterized protein LOC1110231352.4e-1342.71Show/hide
Query:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFD-NEKNESFWGTSVRIR
        +++F F  + D   + + GPW FDK L+ L  P ++    E  F +V FW+ LF+LP+S+ NK +  ++GN +G+FVD D NEK  S WG S+RIR
Subjt:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFD-NEKNESFWGTSVRIR

A0A6P6S3G2 uncharacterized protein LOC1136872933.5e-1240Show/hide
Query:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIR
        +++FKF D  DK+ +   GPW FD NLL + D   NV S         FW+ ++NLPLS+ N    E +GNKLG +  F+   +   WG  +RIR
Subjt:  MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein7.0e-0530.86Show/hide
Query:  YMFKFIDKPDKEWIKRNGPWLFDKNLLALD--DPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFD
        + F F  +   E + R GPW F+  ++ L   +P   +      F  + FW+ +  +P  F N+ VVE IG  LG  +D D
Subjt:  YMFKFIDKPDKEWIKRNGPWLFDKNLLALD--DPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATATGTTCAAGTTTATCGATAAACCTGACAAAGAATGGATCAAGAGAAACGGACCATGGTTATTTGACAAGAATCTACTTGCTCTTGACGATCCTGGAGCCAATGT
CTGTTCTTTGGAAACGGGCTTCAAGAAGGTGGAGTTTTGGTTACTGCTTTTCAACCTTCCTCTAAGTTTCAGAAACAAGCATGTAGTAGAGAAAATAGGTAACAAATTAG
GAGACTTTGTTGATTTTGACAATGAAAAAAATGAAAGCTTTTGGGGAACTAGTGTACGAATCCGGGACATGTGCGCTGAGGAAAAAAACAAGGAAATGATAGCAAGTAAC
AATTATGAGTTTGGAGCTTGGTTGCGATTTCAAGCCTTTGGGAGACCAACTCAAAAACCTGATGATCAAGCAAATGGAATGAAGAATAATTTCTCCAAATCTTTAGAGAC
AGAAGTACAAAAAGAAAAGGATCTTGAGGAAAATGTGGCAATGGTTGGAGATGAATACCAGGGAAATATCTCAATGGACATTCTGGATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATATGTTCAAGTTTATCGATAAACCTGACAAAGAATGGATCAAGAGAAACGGACCATGGTTATTTGACAAGAATCTACTTGCTCTTGACGATCCTGGAGCCAATGT
CTGTTCTTTGGAAACGGGCTTCAAGAAGGTGGAGTTTTGGTTACTGCTTTTCAACCTTCCTCTAAGTTTCAGAAACAAGCATGTAGTAGAGAAAATAGGTAACAAATTAG
GAGACTTTGTTGATTTTGACAATGAAAAAAATGAAAGCTTTTGGGGAACTAGTGTACGAATCCGGGACATGTGCGCTGAGGAAAAAAACAAGGAAATGATAGCAAGTAAC
AATTATGAGTTTGGAGCTTGGTTGCGATTTCAAGCCTTTGGGAGACCAACTCAAAAACCTGATGATCAAGCAAATGGAATGAAGAATAATTTCTCCAAATCTTTAGAGAC
AGAAGTACAAAAAGAAAAGGATCTTGAGGAAAATGTGGCAATGGTTGGAGATGAATACCAGGGAAATATCTCAATGGACATTCTGGATGCTTAG
Protein sequenceShow/hide protein sequence
MYMFKFIDKPDKEWIKRNGPWLFDKNLLALDDPGANVCSLETGFKKVEFWLLLFNLPLSFRNKHVVEKIGNKLGDFVDFDNEKNESFWGTSVRIRDMCAEEKNKEMIASN
NYEFGAWLRFQAFGRPTQKPDDQANGMKNNFSKSLETEVQKEKDLEENVAMVGDEYQGNISMDILDA