; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027893 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027893
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHistidine--tRNA ligase
Genome locationchr8:6876877..6878923
RNA-Seq ExpressionLag0027893
SyntenyLag0027893
Gene Ontology termsGO:0006427 - histidyl-tRNA aminoacylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004821 - histidine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR004516 - Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604395.1 Histidine--tRNA ligase, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.5e-4184.91Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQEVLKC GIPEN+FGKVCII+DK++KIPLDEMKKELKVVGV E+AIEE+L+VL VK LTKLEEILGGGGEA+SDLKQLFSLAEKFGY DW+QFDA I
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

KAG7034545.1 Histidine--tRNA ligase, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-4184.91Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQEVLKC GIPEN+FGKVCII+DK++KIPLDEMKKELKVVGV E+AIEE+L+VL VK LTKLEEILGGGGEA+SDLKQLFSLAEKFGY DW+QFDA I
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

XP_022978407.1 histidine--tRNA ligase, chloroplastic/mitochondrial isoform X2 [Cucurbita maxima]8.5e-4184.91Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQEVLKC GIPEN+FGKVCII+DK++KIPLDEMKKELKVVGV E+AIEE+L+VL VK LTKLEEILGGGGEA+SDLKQLFSLAEKFGY DW+QFDA I
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

XP_023544232.1 histidine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]8.5e-4184.91Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQEVLKC GIPEN+FGKVCII+DK++KIPLDEMKKELKVVGV E+AIEE+L+VL VK LTKLEEILGGGGEA+SDLKQLFSLAEKFGY DW+QFDA I
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

XP_023544233.1 histidine--tRNA ligase, chloroplastic/mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]8.5e-4184.91Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQEVLKC GIPEN+FGKVCII+DK++KIPLDEMKKELKVVGV E+AIEE+L+VL VK LTKLEEILGGGGEA+SDLKQLFSLAEKFGY DW+QFDA I
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

TrEMBL top hitse value%identityAlignment
A0A5D3C5Z0 Histidine--tRNA ligase9.1e-4183.96Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQ+VLKC GIP+N+FGKVCII+DK++KIPLDEMKKELKVVGV E+AIEELL+VL VK LTKLEE+LGGGGEALSDLKQLFSLAEKFGY DW+QFDA I
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

A0A6J1ECF7 Histidine--tRNA ligase4.1e-4184.91Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQEVLKC GIPEN+FGKVCII+DK++KIPLDEMKKELKVVGV E+AIEE+L+VL VK LTKLEEILGGGGEA+SDLKQLFSLAEKFGY DW+QFDA I
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

A0A6J1EG18 Histidine--tRNA ligase4.1e-4184.91Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQEVLKC GIPEN+FGKVCII+DK++KIPLDEMKKELKVVGV E+AIEE+L+VL VK LTKLEEILGGGGEA+SDLKQLFSLAEKFGY DW+QFDA I
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

A0A6J1IL10 Histidine--tRNA ligase4.1e-4184.91Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQEVLKC GIPEN+FGKVCII+DK++KIPLDEMKKELKVVGV E+AIEE+L+VL VK LTKLEEILGGGGEA+SDLKQLFSLAEKFGY DW+QFDA I
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

A0A6J1IMK6 Histidine--tRNA ligase4.1e-4184.91Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQEVLKC GIPEN+FGKVCII+DK++KIPLDEMKKELKVVGV E+AIEE+L+VL VK LTKLEEILGGGGEA+SDLKQLFSLAEKFGY DW+QFDA I
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

SwissProt top hitse value%identityAlignment
O43011 Histidine--tRNA ligase, mitochondrial4.6e-0528.57Show/hide
Query:  NGAKVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKV-VGVPEEAIEELLKVLLVK----FLTKLE--EILGGGGEAL---SDLKQLFSLAEK
        N  K+L  +    G+P++    +   +DK+ K+P +++++E+ V  G+ EE  +++ + +L+K     L KLE   +L     A+   +D++ LF   E 
Subjt:  NGAKVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKV-VGVPEEAIEELLKVLLVK----FLTKLE--EILGGGGEAL---SDLKQLFSLAEK

Query:  FGYVDWVQFDAIIVCGLAY
        FG +D   FD  +  GL Y
Subjt:  FGYVDWVQFDAIIVCGLAY

O82413 Histidine--tRNA ligase, chloroplastic/mitochondrial9.4e-3567.92Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQE+LK  G+PE+LFG+VCII+DK++KIP+DE+KKEL   G+ E+AIE+LL+VL VK L  LE+I+GG GEA++DLKQLFSLAEKFGY +W+QFDA +
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

P70076 Histidine--tRNA ligase, cytoplasmic5.0e-0428.57Show/hide
Query:  NGAKVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKEL-KVVGVPEEAIEEL-LKVLLVKFLTKLEEILGG--------GGEALSDLKQLFSLAEK
        N  ++L  +    G+P+N+F  +C  +DK+ K+P + +K E+    G+ EEA +++ + V +   +   E +L              L+D+K LFS  + 
Subjt:  NGAKVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKEL-KVVGVPEEAIEEL-LKVLLVKFLTKLEEILGG--------GGEALSDLKQLFSLAEK

Query:  FGYVDWVQFDAIIVCGLAY
        F   D V FD  +  GL Y
Subjt:  FGYVDWVQFDAIIVCGLAY

Q86AS6 Histidine--tRNA ligase, cytoplasmic1.7e-0430.83Show/hide
Query:  NGAKVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLK--VLLVKFLTKLEEILGGGG---------EALSDLKQLFSLAE
        N  K+L  +    G+P + F  +C  +DK+ K P +E++KE+  V   + A+ + ++  V L     KL + L   G         EALS L+ LF   E
Subjt:  NGAKVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLK--VLLVKFLTKLEEILGGGG---------EALSDLKQLFSLAE

Query:  KFGYVDWVQFDAIIVCGLAY
         FG    + FD  +  GL Y
Subjt:  KFGYVDWVQFDAIIVCGLAY

Arabidopsis top hitse value%identityAlignment
AT3G46100.1 Histidyl-tRNA synthetase 16.7e-3667.92Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII
        KVLQE+LK  G+PE+LFG+VCII+DK++KIP+DE+KKEL   G+ E+AIE+LL+VL VK L  LE+I+GG GEA++DLKQLFSLAEKFGY +W+QFDA +
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAII

Query:  VCGLAY
        V GLAY
Subjt:  VCGLAY

AT5G03406.1 Class II aaRS and biotin synthetases superfamily protein1.8e-0457.58Show/hide
Query:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLD
        KVLQE LK  G+PE+LFG+VC I+DKV  + ++
Subjt:  KVLQEVLKCNGIPENLFGKVCIILDKVKKIPLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTTCTCTCGTTCATCGATTTTTCGCCGTTGTTCTCAGCTTGACCGCCGCCGTTCGTGAGTGTTTTTCTCCGCCATTCATGGGCGTTATTCTTCCTCTAATGAA
GTTAACTAGAAGATGTTGGATAAGTTCTGCTTTAGACAGAGTATTGGAAGCTAAATCACTGATGCGTTGTTATGGAGCCTTAGTGTTGCTTCAGTTGAATTTATTGATCC
AAGAGAGCTTGTGGCAGTTAGGTATTGTTATTCCTTTGATCAAGCATTTGACTGAGAATGGAGCTAAAGTTTTGCAAGAAGTATTAAAATGCAATGGAATACCTGAAAAT
CTATTTGGCAAGGTTTGCATCATCTTAGACAAGGTTAAGAAAATTCCATTGGATGAGATGAAGAAGGAACTGAAGGTCGTGGGTGTACCAGAGGAGGCTATTGAGGAGCT
GCTAAAAGTTCTTTTAGTAAAGTTTTTGACAAAGTTAGAAGAAATACTTGGAGGTGGTGGCGAAGCGTTGTCTGATCTAAAACAACTATTTTCTCTTGCTGAAAAGTTTG
GGTATGTTGATTGGGTCCAATTTGATGCAATCATTGTCTGTGGCCTTGCTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTTCTCTCGTTCATCGATTTTTCGCCGTTGTTCTCAGCTTGACCGCCGCCGTTCGTGAGTGTTTTTCTCCGCCATTCATGGGCGTTATTCTTCCTCTAATGAA
GTTAACTAGAAGATGTTGGATAAGTTCTGCTTTAGACAGAGTATTGGAAGCTAAATCACTGATGCGTTGTTATGGAGCCTTAGTGTTGCTTCAGTTGAATTTATTGATCC
AAGAGAGCTTGTGGCAGTTAGGTATTGTTATTCCTTTGATCAAGCATTTGACTGAGAATGGAGCTAAAGTTTTGCAAGAAGTATTAAAATGCAATGGAATACCTGAAAAT
CTATTTGGCAAGGTTTGCATCATCTTAGACAAGGTTAAGAAAATTCCATTGGATGAGATGAAGAAGGAACTGAAGGTCGTGGGTGTACCAGAGGAGGCTATTGAGGAGCT
GCTAAAAGTTCTTTTAGTAAAGTTTTTGACAAAGTTAGAAGAAATACTTGGAGGTGGTGGCGAAGCGTTGTCTGATCTAAAACAACTATTTTCTCTTGCTGAAAAGTTTG
GGTATGTTGATTGGGTCCAATTTGATGCAATCATTGTCTGTGGCCTTGCTTATTAA
Protein sequenceShow/hide protein sequence
MGFSLVHRFFAVVLSLTAAVRECFSPPFMGVILPLMKLTRRCWISSALDRVLEAKSLMRCYGALVLLQLNLLIQESLWQLGIVIPLIKHLTENGAKVLQEVLKCNGIPEN
LFGKVCIILDKVKKIPLDEMKKELKVVGVPEEAIEELLKVLLVKFLTKLEEILGGGGEALSDLKQLFSLAEKFGYVDWVQFDAIIVCGLAY