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Lag0027949 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027949
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr8:8452514..8453311
RNA-Seq ExpressionLag0027949
SyntenyLag0027949
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035989.1 protein Ycf2-like [Cucumis melo var. makuwa]3.6e-1240.5Show/hide
Query:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGM-RGFMYAILALAYE-----------------LEVV
        MA+LY LESFL+P+QE + +E DH+     +E+F+ YPWGRVAF LL N+M     S+   GI M  G  ++ L L  +                 LEV 
Subjt:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGM-RGFMYAILALAYE-----------------LEVV

Query:  PLEPTKVEMRMSYFQPFVEDE
        P+  T  E+ M YF PF+E E
Subjt:  PLEPTKVEMRMSYFQPFVEDE

KAA0040869.1 protein Ycf2-like [Cucumis melo var. makuwa]1.8e-1950.49Show/hide
Query:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV
        MA+LY LESFL+P+QE ++++ DH++    +E+F+ YPWGRVAF LL ++M  A  S+   GI M GF++ ILA AYELEV P+  T  E+ M +F PF+
Subjt:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV

Query:  EDE
        E E
Subjt:  EDE

KAA0045552.1 protein Ycf2-like [Cucumis melo var. makuwa]1.4e-1647.57Show/hide
Query:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV
        MA+LY LESFL+P+QE + +E DH++    +E+F+ YPWGRVAF LL ++M  A  S+    I M G ++ ILA AYE EV  +  T  E+ M YF PF+
Subjt:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV

Query:  EDE
        + E
Subjt:  EDE

KAA0064135.1 protein Ycf2-like [Cucumis melo var. makuwa]2.0e-1547.12Show/hide
Query:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSC-GIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPF
        MA+LY LESFL+P+QE + I+ DH++    +E+F+ YPWGRV+F LL ++M     S+    G    GF++ ILA AYELEV P+  T  E+ M +F PF
Subjt:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSC-GIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPF

Query:  VEDE
        +E E
Subjt:  VEDE

TYK28841.1 protein Ycf2-like [Cucumis melo var. makuwa]1.4e-1647.57Show/hide
Query:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV
        MA+LY LESFL+P+QE + +E DH++    +E+F+ YPWGRVAF LL ++M  A  S+    I M G ++ ILA AYE EV  +  T  E+ M YF PF+
Subjt:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV

Query:  EDE
        + E
Subjt:  EDE

TrEMBL top hitse value%identityAlignment
A0A5A7T3K3 Protein Ycf2-like1.7e-1240.5Show/hide
Query:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGM-RGFMYAILALAYE-----------------LEVV
        MA+LY LESFL+P+QE + +E DH+     +E+F+ YPWGRVAF LL N+M     S+   GI M  G  ++ L L  +                 LEV 
Subjt:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGM-RGFMYAILALAYE-----------------LEVV

Query:  PLEPTKVEMRMSYFQPFVEDE
        P+  T  E+ M YF PF+E E
Subjt:  PLEPTKVEMRMSYFQPFVEDE

A0A5A7THT9 Protein Ycf2-like8.7e-2050.49Show/hide
Query:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV
        MA+LY LESFL+P+QE ++++ DH++    +E+F+ YPWGRVAF LL ++M  A  S+   GI M GF++ ILA AYELEV P+  T  E+ M +F PF+
Subjt:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV

Query:  EDE
        E E
Subjt:  EDE

A0A5A7TQC0 Protein Ycf2-like6.9e-1747.57Show/hide
Query:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV
        MA+LY LESFL+P+QE + +E DH++    +E+F+ YPWGRVAF LL ++M  A  S+    I M G ++ ILA AYE EV  +  T  E+ M YF PF+
Subjt:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV

Query:  EDE
        + E
Subjt:  EDE

A0A5A7VE08 Protein Ycf2-like9.9e-1647.12Show/hide
Query:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSC-GIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPF
        MA+LY LESFL+P+QE + I+ DH++    +E+F+ YPWGRV+F LL ++M     S+    G    GF++ ILA AYELEV P+  T  E+ M +F PF
Subjt:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSC-GIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPF

Query:  VEDE
        +E E
Subjt:  VEDE

A0A5D3DZ94 Protein Ycf2-like6.9e-1747.57Show/hide
Query:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV
        MA+LY LESFL+P+QE + +E DH++    +E+F+ YPWGRVAF LL ++M  A  S+    I M G ++ ILA AYE EV  +  T  E+ M YF PF+
Subjt:  MAQLYCLESFLLPRQEKVHIEEDHLL----EELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFV

Query:  EDE
        + E
Subjt:  EDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAATTATATTGTCTGGAAAGCTTCCTACTCCCCCGGCAAGAGAAGGTCCACATCGAAGAAGATCACCTACTAGAGGAGTTGTTCAACGCCTACCCATGG
GGACGTGTCGCCTTCACATTGTTAGCAAACTACATGCAAGAGGCGTGGCTTAGCCGCGACAGTTGTGGAATAGGAATGAGGGGATTTATGTATGCCATCCTAGCA
TTGGCATATGAACTGGAGGTCGTGCCATTGGAACCAACCAAAGTGGAAATGCGCATGTCGTACTTCCAGCCGTTCGTGGAAGATGAGATGGCATCCCGCAGATTA
GGCGGTAGCAAAGCAGTAGCTGAAGGCGATGATACAATCCCCCCAACTTTTGTATTGGGACGGCCACAACCGACCAACTGGGGGGAGTTAGTTGACATATTGAGG
ATAATTCAATATGACGACAACGACAACGACCCTACTGGGGGCAGCATCAGCAACGGGGGGTTGTCTCTGGTACTACAGCAACAATTCCTACTGGAACTGCTGGAA
CCGAGGGAACAGGGAAAACGATCGTTGAAGAAGGCAACAAGGTACGATTCCCATGACGTTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAATTATATTGTCTGGAAAGCTTCCTACTCCCCCGGCAAGAGAAGGTCCACATCGAAGAAGATCACCTACTAGAGGAGTTGTTCAACGCCTACCCATGG
GGACGTGTCGCCTTCACATTGTTAGCAAACTACATGCAAGAGGCGTGGCTTAGCCGCGACAGTTGTGGAATAGGAATGAGGGGATTTATGTATGCCATCCTAGCA
TTGGCATATGAACTGGAGGTCGTGCCATTGGAACCAACCAAAGTGGAAATGCGCATGTCGTACTTCCAGCCGTTCGTGGAAGATGAGATGGCATCCCGCAGATTA
GGCGGTAGCAAAGCAGTAGCTGAAGGCGATGATACAATCCCCCCAACTTTTGTATTGGGACGGCCACAACCGACCAACTGGGGGGAGTTAGTTGACATATTGAGG
ATAATTCAATATGACGACAACGACAACGACCCTACTGGGGGCAGCATCAGCAACGGGGGGTTGTCTCTGGTACTACAGCAACAATTCCTACTGGAACTGCTGGAA
CCGAGGGAACAGGGAAAACGATCGTTGAAGAAGGCAACAAGGTACGATTCCCATGACGTTTCATGA
Protein sequenceShow/hide protein sequence
MAQLYCLESFLLPRQEKVHIEEDHLLEELFNAYPWGRVAFTLLANYMQEAWLSRDSCGIGMRGFMYAILALAYELEVVPLEPTKVEMRMSYFQPFVEDEMASRRL
GGSKAVAEGDDTIPPTFVLGRPQPTNWGELVDILRIIQYDDNDNDPTGGSISNGGLSLVLQQQFLLELLEPREQGKRSLKKATRYDSHDVS