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Lag0027956 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027956
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr8:8693256..8694170
RNA-Seq ExpressionLag0027956
SyntenyLag0027956
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]3.8e-2248.72Show/hide
Query:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL
        E+QK +KVKG EE++  DYL ++ + +I+E+KGL LLALC+YG V++P+ +GYVD  V+KLFF +E GVNP IP+LAET R+LNY R   +      V L
Subjt:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL

Query:  EYLQWRNKRSKISVTTR
         Y+ W +   K     R
Subjt:  EYLQWRNKRSKISVTTR

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]1.4e-2157.47Show/hide
Query:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFR
        E+QK +K KG EE++  DYL ++ + +I+E+KGL LLALC+YG V++P+ +GYVD  V+KLFF +E GVNP IP+LAET R+LNY R
Subjt:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFR

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]2.6e-2349.57Show/hide
Query:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL
        E+QK +KVKG EE++  DYL ++ + +I+E+KGL LLALC+YG V++P+ +GYVDG V+KLFF +E GVNP IP+LA+T R+LNY R   +      V L
Subjt:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL

Query:  EYLQWRNKRSKISVTTR
         Y+ W     K S   R
Subjt:  EYLQWRNKRSKISVTTR

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]9.9e-2357.47Show/hide
Query:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFR
        E+QK +K+KG EE++  DYL ++ + +++E+KGL LLALC+YG V++P+ +GYVDG V+KLFF +E GVNP IP+LAET R+LNY R
Subjt:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFR

TYK07552.1 girdin-like [Cucumis melo var. makuwa]1.3e-2247.86Show/hide
Query:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL
        E+QK +KVK  EE++  DYL ++ + +I+E+KGL LLALC+YG V++P+ +GYVDG V+KLFF +E GVNP IP+LA+T R+LNY+R   +      V L
Subjt:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL

Query:  EYLQWRNKRSKISVTTR
         Y+ W +   K     R
Subjt:  EYLQWRNKRSKISVTTR

TrEMBL top hitse value%identityAlignment
A0A5A7T5S7 Girdin-like1.8e-2248.72Show/hide
Query:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL
        E+QK +KVKG EE++  DYL ++ + +I+E+KGL LLALC+YG V++P+ +GYVD  V+KLFF +E GVNP IP+LAET R+LNY R   +      V L
Subjt:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL

Query:  EYLQWRNKRSKISVTTR
         Y+ W +   K     R
Subjt:  EYLQWRNKRSKISVTTR

A0A5A7T6E2 Girdin-like6.9e-2257.47Show/hide
Query:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFR
        E+QK +K KG EE++  DYL ++ + +I+E+KGL LLALC+YG V++P+ +GYVD  V+KLFF +E GVNP IP+LAET R+LNY R
Subjt:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFR

A0A5A7UL51 Girdin-like1.3e-2349.57Show/hide
Query:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL
        E+QK +KVKG EE++  DYL ++ + +I+E+KGL LLALC+YG V++P+ +GYVDG V+KLFF +E GVNP IP+LA+T R+LNY R   +      V L
Subjt:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL

Query:  EYLQWRNKRSKISVTTR
         Y+ W     K S   R
Subjt:  EYLQWRNKRSKISVTTR

A0A5A7UWQ6 Uncharacterized protein4.8e-2357.47Show/hide
Query:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFR
        E+QK +K+KG EE++  DYL ++ + +++E+KGL LLALC+YG V++P+ +GYVDG V+KLFF +E GVNP IP+LAET R+LNY R
Subjt:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFR

A0A5D3C8D9 Girdin-like6.3e-2347.86Show/hide
Query:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL
        E+QK +KVK  EE++  DYL ++ + +I+E+KGL LLALC+YG V++P+ +GYVDG V+KLFF +E GVNP IP+LA+T R+LNY+R   +      V L
Subjt:  EVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVAL

Query:  EYLQWRNKRSKISVTTR
         Y+ W +   K     R
Subjt:  EYLQWRNKRSKISVTTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTGAGGGAAGTGCAGAAAAATGTGAAAGTAAAGGGGGTTGAAGAGTCTATATCTGTAGATTATCTAACAGAACTCGCTCGTAAACACATAAATGAAGAAAAGGG
TCTGGTTCTGTTAGCTCTGTGCGTCTACGGGATGGTCTTGTATCCCAGAGTAAAAGGATATGTGGATGGTAATGTCTTGAAGCTCTTCTTCAGCATTGAGGAAGGGGTGA
ATCCAGCCATACCTCTTCTGGCGGAAACAGTTCGGACACTCAATTATTTTAGAAGGCTAAATGATAACAATCATTTTGAGGGAGTTGCTCTAGAATACTTACAGTGGCGC
AACAAGAGGAGCAAGATCTCAGTTACAACTCGTGGTAATGTTGGAGAATCTTCGAAGAGAGCAGTAGACAAACCTGACCAGCTAGCGACAGAGCAGAAAGAGTTAGTGGG
ATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCTGAGGGAAGTGCAGAAAAATGTGAAAGTAAAGGGGGTTGAAGAGTCTATATCTGTAGATTATCTAACAGAACTCGCTCGTAAACACATAAATGAAGAAAAGGG
TCTGGTTCTGTTAGCTCTGTGCGTCTACGGGATGGTCTTGTATCCCAGAGTAAAAGGATATGTGGATGGTAATGTCTTGAAGCTCTTCTTCAGCATTGAGGAAGGGGTGA
ATCCAGCCATACCTCTTCTGGCGGAAACAGTTCGGACACTCAATTATTTTAGAAGGCTAAATGATAACAATCATTTTGAGGGAGTTGCTCTAGAATACTTACAGTGGCGC
AACAAGAGGAGCAAGATCTCAGTTACAACTCGTGGTAATGTTGGAGAATCTTCGAAGAGAGCAGTAGACAAACCTGACCAGCTAGCGACAGAGCAGAAAGAGTTAGTGGG
ATGA
Protein sequenceShow/hide protein sequence
MQLREVQKNVKVKGVEESISVDYLTELARKHINEEKGLVLLALCVYGMVLYPRVKGYVDGNVLKLFFSIEEGVNPAIPLLAETVRTLNYFRRLNDNNHFEGVALEYLQWR
NKRSKISVTTRGNVGESSKRAVDKPDQLATEQKELVG