; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027961 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027961
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:8721081..8722002
RNA-Seq ExpressionLag0027961
SyntenyLag0027961
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010673168.1 PREDICTED: uncharacterized protein LOC104889608 [Beta vulgaris subsp. vulgaris]4.3e-3837.32Show/hide
Query:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAIL------------------------------------
        I LIPK K P  VSE+  ISLCNV +KLV+KVL NR+K +L  ++S++QS F+ GR + DNA++                                    
Subjt:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAIL------------------------------------

Query:  -----------------VILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLRED---------SEARIVHDILRQYECASDQTV
                         V+ C+SSVR+SF VNG  CG V+PSRGLRQGD +SPY+F+L A   S ++R+           E  ++ DIL +YE AS Q +
Subjt:  -----------------VILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLRED---------SEARIVHDILRQYECASDQTV

Query:  NLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGAGK
        N++KS +SFS    S  + ++ + L ++    H +YLG+P+   R++      I D VW+++QGWK KL L  AGK
Subjt:  NLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGAGK

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]1.2e-3734Show/hide
Query:  MIVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI------------------------------------
        ++ LIPK K P ++S+Y  ISLCNV YKLVSK +V R+K  L+Q+IS++QS F+  R + DN +                                    
Subjt:  MIVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI------------------------------------

Query:  -----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLR--------------------------EDS--
                         L++ C+ SV +SF +NG   G V+PSRG+RQGD LSPY+FL+CA+GLS +L+                          +DS  
Subjt:  -----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLR--------------------------EDS--

Query:  -------EARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVG
                AR +H  L  Y  AS Q +N +K ++SFS NT  + Q+    +L + +  CH QYLGLPSF  +N+    G I D +W+ +  WK  LF  G
Subjt:  -------EARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVG

XP_030924930.1 uncharacterized protein LOC115951962 [Quercus lobata]5.0e-3938.75Show/hide
Query:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAIL------------------------------------
        I LI K K P++VS++  ISLCNV YKL++KVLVNR+K +L  ++S  QS F+ GR + DN ++                                    
Subjt:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAIL------------------------------------

Query:  -----------------VILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLR----EDSEARIVHDILRQYECASDQTVNLDKS
                         ++ CI SV +S  +NGV    + PSRGLRQGD LSPY+FLLCA GL  +L     E+SE +++ D+L  YE  S Q +N DK+
Subjt:  -----------------VILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLR----EDSEARIVHDILRQYECASDQTVNLDKS

Query:  IISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGAGK
         I FS NT  ++QV+I  +L V     + +YLGLP+F+ R +     +IK+ +W++IQGWK KL L  AGK
Subjt:  IISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGAGK

XP_030945935.1 uncharacterized protein LOC115970438 [Quercus lobata]8.6e-3939.26Show/hide
Query:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI-------------------------------------
        IVL+PK + P+RV+EY  ISLCNV YKL SK L NR+K +L  +IS  QS F+ GR + DN +                                     
Subjt:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI-------------------------------------

Query:  ----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLRE---DSEARIVHDILRQYECASDQTVNLDKSI
                        L++ CISSV ++  VNG   G ++PSRGLRQGD LSPY+FL+CA+GLS ++++   D     V  +LR YE AS Q +N  K+ 
Subjt:  ----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLRE---DSEARIVHDILRQYECASDQTVNLDKSI

Query:  ISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGAGK
        + FSPNT   IQ +I      QV   H +YLGLPS + RN+  T   +K  + +++ GWK KL L  AGK
Subjt:  ISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGAGK

XP_030963678.1 uncharacterized protein LOC115984820 [Quercus lobata]1.0e-3633.44Show/hide
Query:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI-------------------------------------
        IVLIPK K P +V++Y  ISLCNV YK+ SK + NRMK +L ++I ++QS F+ GR + DN +                                     
Subjt:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI-------------------------------------

Query:  ----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLRED------------------------------
                        LV+ C++SV++   VNG+ CG + P+RGLRQGD LSPY+FL+CA+GLS +L +                               
Subjt:  ----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLRED------------------------------

Query:  -----SEARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGA
             SEA+ +  IL+ YE +S Q +N +K+ + FSPNT++  + ++  +   QV   H  YLGLPS + R+++ T   +K  V  ++ GWK KL L  A
Subjt:  -----SEARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGA

Query:  GK
        GK
Subjt:  GK

TrEMBL top hitse value%identityAlignment
A0A2N9F7A6 Uncharacterized protein7.8e-3834.44Show/hide
Query:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI-------------------------------------
        I L+PK   P +++++  I+LCNV YK++SKVL NR+K  L Q++S+ QS F+ GR + DN +                                     
Subjt:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI-------------------------------------

Query:  ----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLRE-DSEARI------------------------
                        L+++CI SV +S  +NG +CG    SRG+RQGD LSPY+FLLCA+GLS++LR+ ++E +I                        
Subjt:  ----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLRE-DSEARI------------------------

Query:  ----------VHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGA
                  V +IL+QYE AS Q +N  K+ I F+ NT   ++ QI  + QV     H +YLGLPSF+ R++S   G +K  VWQ++ GWK K FL  A
Subjt:  ----------VHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGA

Query:  GK
        G+
Subjt:  GK

A0A2N9GQ35 Reverse transcriptase domain-containing protein7.8e-3834.11Show/hide
Query:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI-------------------------------------
        I L+PK   P +++++  I+LCNV YK++SKVL NR+K +L Q++S+ QS F+ GR + DN +                                     
Subjt:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI-------------------------------------

Query:  ----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLRE-DSEARI------------------------
                        L+++CI SV +S  +NG +CG    SRG+RQGD LSPY+FLLCA+GLS++LR+ ++E +I                        
Subjt:  ----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLRE-DSEARI------------------------

Query:  ----------VHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGA
                  V +IL+QYE AS Q +N  K+ I F+ NT   ++ QI  + QV     H +YLGLPSF+ R++S   G +K  VW+++ GWK K FL  A
Subjt:  ----------VHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGA

Query:  GK
        G+
Subjt:  GK

A0A803NL40 Uncharacterized protein5.4e-3933.99Show/hide
Query:  MIVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI------------------------------------
        +I LIPK + P R+SEY  ISLC+V YKLVSK +VNR K      ISQ+QS F+LGR + DN +                                    
Subjt:  MIVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI------------------------------------

Query:  -----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLREDSE---------------------------
                         LV+LC+SS   SFN+NGV  G V P RGL QGD +SPY+FL+C++GLS +LR+  E                           
Subjt:  -----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLREDSE---------------------------

Query:  --------ARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVG
                 + ++ +L  Y  AS Q +N +K+++SFSPNT + +Q + + +L + +   H +YLGLPS+  R++      IKDC+W+ +  W  KLF +G
Subjt:  --------ARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVG

Query:  AGK
          K
Subjt:  AGK

A0A803P3J1 Uncharacterized protein2.1e-3835.1Show/hide
Query:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI-------------------------------------
        +VLIPKKK P  + +   I+LCNV YK+++KV+ NRMK  ++Q++S+ QS FI GR + DN +                                     
Subjt:  IVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI-------------------------------------

Query:  ----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLR--------------------------EDS---
                        LV+ C+SS  +     G   G ++PSRG+RQGD LSPY+F+LCA+GLS +++                          +DS   
Subjt:  ----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLR--------------------------EDS---

Query:  ------EARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGA
              EA  + ++L Q+ECAS Q VNL KS I +S NTE+ ++  IN +LQ+        YLGLPS M RN+S  LGF+KD V +++QGW  K+ L  A
Subjt:  ------EARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGA

Query:  GK
        GK
Subjt:  GK

A0A803QFF3 Uncharacterized protein3.5e-3833.44Show/hide
Query:  MIVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI------------------------------------
        +I LIPK K P+ + +Y  ISLCNV YKL+SKVLV R K +L  +IS++QS F+L R + DN +                                    
Subjt:  MIVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAI------------------------------------

Query:  -----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLREDSE---------------------------
                         L++ C+SS  FSF +NG   G+V P+RGLRQGD LSPY+FL+C++GLS +L  + E                           
Subjt:  -----------------LVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLREDSE---------------------------

Query:  --------ARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVG
                A  + ++L  Y  AS Q +N  KSI+SFSPNT +  Q   +Q L++ +  CH  YLGLP++   N+      +K+ +W+ +  W  KLF VG
Subjt:  --------ARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVG

Query:  AGKCF
         G  F
Subjt:  AGKCF

SwissProt top hitse value%identityAlignment
P92555 Uncharacterized mitochondrial protein AtMg012505.8e-0656.82Show/hide
Query:  FNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLREDSE
        F +NG   G V PSRGLRQGD LSPY+F+LC + LS + R   E
Subjt:  FNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLREDSE

Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)4.1e-0756.82Show/hide
Query:  FNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLREDSE
        F +NG   G V PSRGLRQGD LSPY+F+LC + LS + R   E
Subjt:  FNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAKGLSYMLREDSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATAGTATTAATCCCTAAGAAGAAGTGTCCCAGGCGTGTTTCAGAATACTGGTTGATATCATTGTGCAATGTGACTTATAAGCTAGTGTCAAAGGTACTGGTGAA
TCGTATGAAAGGTATGCTCAATCAACTGATATCCCAACACCAGAGTGTGTTTATCCTTGGGCGATGTGTGGTTGATAATGCTATCTTGGTTATTCTCTGTATTTCATCGG
TCCGGTTCTCCTTTAATGTGAATGGGGTGAGATGTGGGGATGTGGTTCCAAGTAGAGGGTTGAGGCAGGGGGATCTGTTGTCTCCATACGTATTCCTGCTGTGTGCTAAG
GGGCTTTCCTATATGCTTCGGGAGGATAGTGAGGCTCGTATTGTGCATGACATACTTCGCCAATACGAGTGTGCTTCAGACCAGACTGTCAACTTGGATAAGTCTATAAT
TTCTTTTAGTCCTAACACAGAATCGAACATTCAGGTGCAGATCAACCAGATGTTACAGGTTCAGGTTACGGCATGTCATCGCCAATATCTGGGGCTTCCATCTTTCATGC
CTCGAAACAGGTCGGGGACGCTTGGATTTATTAAGGATTGTGTTTGGCAGCAAATACAAGGCTGGAAGGGAAAGCTCTTTTTAGTAGGGGCAGGGAAGTGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATAGTATTAATCCCTAAGAAGAAGTGTCCCAGGCGTGTTTCAGAATACTGGTTGATATCATTGTGCAATGTGACTTATAAGCTAGTGTCAAAGGTACTGGTGAA
TCGTATGAAAGGTATGCTCAATCAACTGATATCCCAACACCAGAGTGTGTTTATCCTTGGGCGATGTGTGGTTGATAATGCTATCTTGGTTATTCTCTGTATTTCATCGG
TCCGGTTCTCCTTTAATGTGAATGGGGTGAGATGTGGGGATGTGGTTCCAAGTAGAGGGTTGAGGCAGGGGGATCTGTTGTCTCCATACGTATTCCTGCTGTGTGCTAAG
GGGCTTTCCTATATGCTTCGGGAGGATAGTGAGGCTCGTATTGTGCATGACATACTTCGCCAATACGAGTGTGCTTCAGACCAGACTGTCAACTTGGATAAGTCTATAAT
TTCTTTTAGTCCTAACACAGAATCGAACATTCAGGTGCAGATCAACCAGATGTTACAGGTTCAGGTTACGGCATGTCATCGCCAATATCTGGGGCTTCCATCTTTCATGC
CTCGAAACAGGTCGGGGACGCTTGGATTTATTAAGGATTGTGTTTGGCAGCAAATACAAGGCTGGAAGGGAAAGCTCTTTTTAGTAGGGGCAGGGAAGTGCTTCTGA
Protein sequenceShow/hide protein sequence
MMIVLIPKKKCPRRVSEYWLISLCNVTYKLVSKVLVNRMKGMLNQLISQHQSVFILGRCVVDNAILVILCISSVRFSFNVNGVRCGDVVPSRGLRQGDLLSPYVFLLCAK
GLSYMLREDSEARIVHDILRQYECASDQTVNLDKSIISFSPNTESNIQVQINQMLQVQVTACHRQYLGLPSFMPRNRSGTLGFIKDCVWQQIQGWKGKLFLVGAGKCF