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Lag0027962 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027962
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:8722419..8722793
RNA-Seq ExpressionLag0027962
SyntenyLag0027962
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]6.9e-1743Show/hide
Query:  TRVADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIFL
        T VA+L+   +QW   L+  HF P +   I+ IPL     ED++IWHY+K G +SVKSGY++   I   ++ S S+H   L  W+  WK+ IP K+KIFL
Subjt:  TRVADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIFL

XP_030479133.1 uncharacterized protein LOC115696372 [Cannabis sativa]1.2e-1648.45Show/hide
Query:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF
        VAD +T +R+WN+  L   FS  +V  IL IPL      DR IWHYE SG +SV SGY L   +  E++LSS S H+  +WWK  WK+ +P+K+KIF
Subjt:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF

XP_030483481.1 uncharacterized protein LOC115700065 [Cannabis sativa]1.5e-1648.45Show/hide
Query:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF
        VA+L+T  RQWN  LL   FS  +V  ILTIPL    A D +IWHY  SG++ V SGY    + +LE    SS+ +S  +WWK  WK+ +P KIKIF
Subjt:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF

XP_030495196.1 uncharacterized protein LOC115710989 [Cannabis sativa]2.6e-1644.44Show/hide
Query:  TRVADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF
        T VA+L+T  RQW+V LL  +F P +V   LTIPL    + D ++WH+  +G+++V+SGY L   +A +   SSSS  S   WWK  W + +P KIKIF
Subjt:  TRVADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF

XP_030505314.1 uncharacterized protein LOC115720302 [Cannabis sativa]4.0e-1743.69Show/hide
Query:  PWRQTRVADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKI
        P     V+DL+TT R WN+  L  HF   ++  IL +PL    +ED++IWH+  SG++SVKSGY L    +L +  S S   S  SWW   WK+ +P KI
Subjt:  PWRQTRVADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKI

Query:  KIF
        KIF
Subjt:  KIF

TrEMBL top hitse value%identityAlignment
A0A803P9P5 Uncharacterized protein7.4e-1743.27Show/hide
Query:  PWRQTRVADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKI
        P    +V++L+T  RQWN  LL   F   +V+ I +IPL      D++IW++E +G++SVKSGY L     LE++L ++S ++ L WWK  W +T+P+KI
Subjt:  PWRQTRVADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKI

Query:  KIFL
        KIFL
Subjt:  KIFL

A0A803PIB5 Uncharacterized protein3.3e-1747.42Show/hide
Query:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF
        VA+L+T  RQWN+ LL  +F   ++  ILTIPL      D++IWHY+ S +F+V+S Y L  ++A ++ LSSSS  S L+WWK  W + IP K+KIF
Subjt:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF

A0A803QBU0 Uncharacterized protein3.3e-1747.42Show/hide
Query:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF
        VA+L+T  RQWNV LL  +FSP +V  ILT+PL    + D++IWH   SG F+V+S Y L    +LE+E  SS+  S ++WWK  W + +P K+KIF
Subjt:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF

A0A803QEG9 Uncharacterized protein4.3e-1746.39Show/hide
Query:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF
        VA+L+T  RQWN+ LL  +F P ++  ILT+PL      D++IWH+  SG F+V+S Y L    +LE E  SSS  S + WWK  W + IP K+KIF
Subjt:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF

A0A803QGT2 Uncharacterized protein5.7e-1748.45Show/hide
Query:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF
        VAD +T +R+WN+  L   FS  +V  IL IPL      DR IWHYE SG +SV SGY L   +  E++LSS S H+  +WWK  WK+ +P+K+KIF
Subjt:  VADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKGCWKMTIPNKIKIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATACGGAACCAACTGGATATCGGATGATCTTTGTCTCAAGGTTCGCTCGCCGGTTACCTTGGCGGCAGACGCGGGTAGCCGATCTTGTTACAACCTCTAGGCAGTG
GAATGTGGGCCTTTTGTGGCATCACTTCAGCCCTCATGAGGTGAGTCTTATTCTTACTATTCCTTTACGAAATGGGTTGGCAGAGGATAGAATGATCTGGCATTATGAGA
AATCTGGACTATTTTCGGTTAAAAGTGGTTATCGGTTAGGCCAAATGATTGCACTTGAGCAAGAATTGTCCTCCTCCTCGCATCATTCTATCCTTAGTTGGTGGAAGGGG
TGTTGGAAAATGACGATCCCTAACAAAATCAAAATTTTCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATACGGAACCAACTGGATATCGGATGATCTTTGTCTCAAGGTTCGCTCGCCGGTTACCTTGGCGGCAGACGCGGGTAGCCGATCTTGTTACAACCTCTAGGCAGTG
GAATGTGGGCCTTTTGTGGCATCACTTCAGCCCTCATGAGGTGAGTCTTATTCTTACTATTCCTTTACGAAATGGGTTGGCAGAGGATAGAATGATCTGGCATTATGAGA
AATCTGGACTATTTTCGGTTAAAAGTGGTTATCGGTTAGGCCAAATGATTGCACTTGAGCAAGAATTGTCCTCCTCCTCGCATCATTCTATCCTTAGTTGGTGGAAGGGG
TGTTGGAAAATGACGATCCCTAACAAAATCAAAATTTTCCTATGA
Protein sequenceShow/hide protein sequence
MYTEPTGYRMIFVSRFARRLPWRQTRVADLVTTSRQWNVGLLWHHFSPHEVSLILTIPLRNGLAEDRMIWHYEKSGLFSVKSGYRLGQMIALEQELSSSSHHSILSWWKG
CWKMTIPNKIKIFL