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Lag0028001 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028001
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMuDRA-like transposase
Genome locationchr8:9807243..9807614
RNA-Seq ExpressionLag0028001
SyntenyLag0028001
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147770.1 uncharacterized protein LOC111016625 [Momordica charantia]3.6e-3458.82Show/hide
Query:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH
        +TCTC++FDY+EIPCSHAIA A  RN++V +LCS  Y  E++IL YAEP+YP+G   +W    ++    I PPK V  VGR +T RIPSAGE   ++QVH
Subjt:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH

Query:  KCGRCGNIGHNRKTCREPL
        KCGRCGN+GHNR+TCR+PL
Subjt:  KCGRCGNIGHNRKTCREPL

XP_022153143.1 uncharacterized protein LOC111020711 [Momordica charantia]2.7e-3459.84Show/hide
Query:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH
        RTC C+EFDY+++PCSHAIA A  RNVN  TLCSPA   E++I +Y EP+YP G   +W     F E ++ PPK V RVGR +TVRIPS GE    +QVH
Subjt:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH

Query:  KCGRCGNIGHNRKTCREPLSMT
        KC RCGN+GHNRKTCR+PL  T
Subjt:  KCGRCGNIGHNRKTCREPLSMT

XP_022154610.1 uncharacterized protein LOC111021833 [Momordica charantia]2.1e-3462.18Show/hide
Query:  TCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVHK
        TC+CREFDY++IPCSH IAAA  RN+N  +LC  AY T S IL+YAEPI+PVG +S W  S EF  + + PPK V RVGRR T RIPS GE   ++Q  K
Subjt:  TCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVHK

Query:  CGRCGNIGHNRKTCREPLS
        CGRCG  GHNRKTC EPL+
Subjt:  CGRCGNIGHNRKTCREPLS

XP_022156830.1 uncharacterized protein LOC111023664 [Momordica charantia]6.1e-3458.82Show/hide
Query:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH
        RTC C+EFDY++ PCSHAIAA    NVN  TLCSPAY  +++I +Y EP+YP+G   +W    +F +  + PP+ V+RVGRR+T+RIPSAGE    +QVH
Subjt:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH

Query:  KCGRCGNIGHNRKTCREPL
        KCG CGN+GHNRKTCR+PL
Subjt:  KCGRCGNIGHNRKTCREPL

XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]5.5e-3563.56Show/hide
Query:  CTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVHKC
        C+CREFDY++IPCSHAIAAA  RN+N  +LC  AY T S IL+YAEPI+PVG +S W  S EF  + + PPK V RVGRR+TVRIPS GE   ++Q  KC
Subjt:  CTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVHKC

Query:  GRCGNIGHNRKTCREPLS
        GRCG  GHNRKTC EPL+
Subjt:  GRCGNIGHNRKTCREPLS

TrEMBL top hitse value%identityAlignment
A0A6J1D127 uncharacterized protein LOC1110166251.7e-3458.82Show/hide
Query:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH
        +TCTC++FDY+EIPCSHAIA A  RN++V +LCS  Y  E++IL YAEP+YP+G   +W    ++    I PPK V  VGR +T RIPSAGE   ++QVH
Subjt:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH

Query:  KCGRCGNIGHNRKTCREPL
        KCGRCGN+GHNR+TCR+PL
Subjt:  KCGRCGNIGHNRKTCREPL

A0A6J1DGQ6 uncharacterized protein LOC1110207111.3e-3459.84Show/hide
Query:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH
        RTC C+EFDY+++PCSHAIA A  RNVN  TLCSPA   E++I +Y EP+YP G   +W     F E ++ PPK V RVGR +TVRIPS GE    +QVH
Subjt:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH

Query:  KCGRCGNIGHNRKTCREPLSMT
        KC RCGN+GHNRKTCR+PL  T
Subjt:  KCGRCGNIGHNRKTCREPLSMT

A0A6J1DK35 uncharacterized protein LOC1110218331.0e-3462.18Show/hide
Query:  TCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVHK
        TC+CREFDY++IPCSH IAAA  RN+N  +LC  AY T S IL+YAEPI+PVG +S W  S EF  + + PPK V RVGRR T RIPS GE   ++Q  K
Subjt:  TCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVHK

Query:  CGRCGNIGHNRKTCREPLS
        CGRCG  GHNRKTC EPL+
Subjt:  CGRCGNIGHNRKTCREPLS

A0A6J1DRF6 uncharacterized protein LOC1110236643.0e-3458.82Show/hide
Query:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH
        RTC C+EFDY++ PCSHAIAA    NVN  TLCSPAY  +++I +Y EP+YP+G   +W    +F +  + PP+ V+RVGRR+T+RIPSAGE    +QVH
Subjt:  RTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVH

Query:  KCGRCGNIGHNRKTCREPL
        KCG CGN+GHNRKTCR+PL
Subjt:  KCGRCGNIGHNRKTCREPL

A0A6J1DYC4 uncharacterized protein LOC1110256782.7e-3563.56Show/hide
Query:  CTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVHKC
        C+CREFDY++IPCSHAIAAA  RN+N  +LC  AY T S IL+YAEPI+PVG +S W  S EF  + + PPK V RVGRR+TVRIPS GE   ++Q  KC
Subjt:  CTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVHKC

Query:  GRCGNIGHNRKTCREPLS
        GRCG  GHNRKTC EPL+
Subjt:  GRCGNIGHNRKTCREPLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64255.1 MuDR family transposase4.1e-0430.56Show/hide
Query:  TCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPP
        +CTC +F  Y+ PC HA+A  +    N        Y  E +  +YA     V  MS W  ++      +LPP
Subjt:  TCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPP

AT1G64260.1 MuDR family transposase2.2e-0534.48Show/hide
Query:  TCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEW
        TCTCR+F  Y+ PC HA+A      +N        Y  E    +YA    PV  ++ W
Subjt:  TCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGACGTGCACTTGTCGAGAGTTTGATTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGCCACTCTTTGTTCCCCGGC
ATATCACACAGAATCCGTGATCCTATCATACGCAGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGATCCGCTGAATTTCAAGAGATGGAGATATTGCCGC
CAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAACTACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGT
CATAACCGCAAAACTTGTCGTGAACCGCTCTCAATGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGACGTGCACTTGTCGAGAGTTTGATTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGCCACTCTTTGTTCCCCGGC
ATATCACACAGAATCCGTGATCCTATCATACGCAGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGATCCGCTGAATTTCAAGAGATGGAGATATTGCCGC
CAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAACTACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGT
CATAACCGCAAAACTTGTCGTGAACCGCTCTCAATGACATGA
Protein sequenceShow/hide protein sequence
MRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYAEPIYPVGPMSEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQLQQVHKCGRCGNIG
HNRKTCREPLSMT