CuGenDBv2

Gene ID	Lag0028006
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Photosystem II CP47 reaction center protein
Genome location	chr8:9961344..9964629
RNA-Seq Expression	Lag0028006
Synteny	Lag0028006
Gene Ontology terms	GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR000932 - Photosystem antenna protein-like IPR036001 - Photosystem antenna protein-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AHM88804.1 photosystem II CP47 chlorophyll apoprotein [Lagenaria siceraria]

2.8e-141

70.33

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHPVFRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

EXB38499.1 Photosystem II CP47 chlorophyll apoprotein [Morus notabilis]

6.5e-146

79.81

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQAIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFG
        MGLPWYRVHTVVLNDPGRL+S+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQAIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSG+ CFG
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQAIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFG

Query:  FGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIASHHIA-------------------------------------------AAFVV
        FGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIASHHI                                            AAFVV
Subjt:  FGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIASHHIA-------------------------------------------AAFVV

Query:  AGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSEAWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGR
        AGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAEN+SLSEAWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHP+FRDKEGR
Subjt:  AGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSEAWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGR

Query:  ELFVHRMLTFFE
        EL+V RM TFFE
Subjt:  ELFVHRMLTFFE

YP_009317412.1 photosystem II 47 kDa protein [Coccinia grandis]

2.8e-141

70.33

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHPVFRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

YP_009752269.1 photosystem II 47 kDa protein [Trichosanthes baviensis]

2.8e-141

70.33

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHPVFRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

YP_009752522.1 photosystem II 47 kDa protein [Trichosanthes tubiflora]

2.8e-141

70.33

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHPVFRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

TrEMBL top hits

e value

%identity

Alignment

A0A0S2IFN4 Photosystem II CP47 reaction center protein

1.4e-141

70.33

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHPVFRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

A0A1P8LE33 Photosystem II CP47 reaction center protein

1.4e-141

70.33

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHPVFRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

A0A2Z2CGC0 Photosystem II CP47 reaction center protein

1.4e-141

70.33

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHPVFRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

W9QJH4 Photosystem II CP47 chlorophyll apoprotein

3.1e-146

79.81

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQAIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFG
        MGLPWYRVHTVVLNDPGRL+S+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQAIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSG+ CFG
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQAIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFG

Query:  FGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIASHHIA-------------------------------------------AAFVV
        FGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIASHHI                                            AAFVV
Subjt:  FGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIASHHIA-------------------------------------------AAFVV

Query:  AGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSEAWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGR
        AGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAEN+SLSEAWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHP+FRDKEGR
Subjt:  AGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSEAWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGR

Query:  ELFVHRMLTFFE
        EL+V RM TFFE
Subjt:  ELFVHRMLTFFE

X2F2N4 Photosystem II CP47 reaction center protein

1.4e-141

70.33

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHPVFRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

SwissProt top hits

e value

%identity

Alignment

A7Y3H4 Photosystem II CP47 reaction center protein

2.0e-142

69.23

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSGL CFGFGAFHVTGLYGP IWVSDPYGLTG+VQ VNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHP+FRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

B1A961 Photosystem II CP47 reaction center protein

4.5e-142

68.96

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGP IWVSDPYGLTG+VQ VNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHP+FRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

B2XWP9 Photosystem II CP47 reaction center protein

4.5e-142

68.68

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRL+S+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGP IWVSDPYGLTG+VQ+VNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHP+FRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

Q2QD63 Photosystem II CP47 reaction center protein

1.6e-142

69.78

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE F DERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGP IWVSDPYGLTGRVQAVNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVS  LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHPVFRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

Q7FNS4 Photosystem II CP47 reaction center protein

4.5e-142

68.96

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLLS+HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGP IWVSDPYGLTG+VQ VNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHP+FRDKEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

Arabidopsis top hits

e value

%identity

Alignment

ATCG00280.1 photosystem II reaction center protein C

4.8e-06

38.46

Show/hide

Query:  GLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILD
        G  W+  +  ++N  G+LL  H+ H  L+V WAG+M L+E+A F P  P+ +
Subjt:  GLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILD

ATCG00680.1 photosystem II reaction center protein B

4.6e-142

68.41

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------
        MGLPWYRVHTVVLNDPGRLL++HIMHTALV GWAGSMALYELAVFDPSDP+LDPMWRQ                                          
Subjt:  MGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQ------------------------------------------

Query:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS
                  AIWHWVYWDLE FCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGP IWVSDPYGLTG+VQ VNPAWGV+GFDPFV GGIAS
Subjt:  ----------AIWHWVYWDLERFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIAS

Query:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE
        HHIA                                           AAFVVAGTMWYGS TTPIELFGPTRYQWDQGYFQQEIYRRVSA LAENQSLSE
Subjt:  HHIA-------------------------------------------AAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVSAELAENQSLSE

Query:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE
        AW+KIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGI VGWLGHPVFR+KEGRELFV RM TFFE
Subjt:  AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTGCATCAGAAGAAAGACTGAAGAAGACGGTGCCCCTACTGTCGGGATGGGGAACTACTGTAAGGGGTATTTCCATGGGGTTGCCTTGGTATCGTGTTCATACCGT
TGTATTGAATGATCCCGGTCGTTTGCTTTCTATTCATATAATGCATACAGCTCTAGTTGTTGGTTGGGCCGGTTCAATGGCCCTATACGAATTAGCAGTTTTTGATCCCT
CTGATCCTATTCTTGATCCAATGTGGAGACAAGCTATCTGGCATTGGGTGTATTGGGATCTAGAAAGATTTTGTGATGAACGTACAGGAAAACCCTCTTTGGATTTGCCG
AAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGGTTGCTTTGGTTTTGGCGCATTTCATGTAACAGGATTGTATGGTCCGAGAATATGGGTATCCGATCCTTATGG
ATTAACTGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCAAAGGGTTTGATCCTTTTGTTTCGGGCGGAATAGCCTCTCATCATATTGCAGCAGCTTTTGTTGTTG
CTGGAACTATGTGGTATGGTTCAACAACTACCCCGATTGAATTATTTGGGCCCACTCGTTATCAATGGGATCAGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGT
GCCGAGTTAGCCGAAAATCAAAGTTTATCAGAAGCTTGGTCTAAAATTCCTGAAAAATTCGCTTTTTATGATTACATCGGGAATAATCCCGCAAAAGGTGGATTATTCAG
AGCAGGTTCCATGGACAACGGGGATGGAATAGTTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACACCGTATGCTAACCTTTT
TTGAAAACGATATATCGTTTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MTASEERLKKTVPLLSGWGTTVRGISMGLPWYRVHTVVLNDPGRLLSIHIMHTALVVGWAGSMALYELAVFDPSDPILDPMWRQAIWHWVYWDLERFCDERTGKPSLDLP
KIFGIHLFLSGLGCFGFGAFHVTGLYGPRIWVSDPYGLTGRVQAVNPAWGVKGFDPFVSGGIASHHIAAAFVVAGTMWYGSTTTPIELFGPTRYQWDQGYFQQEIYRRVS
AELAENQSLSEAWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIVVGWLGHPVFRDKEGRELFVHRMLTFFENDISF

Lag0028006 (gene) of Sponge gourd (AG-4) v1 genome