; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028013 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028013
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationchr8:10436530..10437732
RNA-Seq ExpressionLag0028013
SyntenyLag0028013
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8734433.1 Eukaryotic translation initiation factor 3 subunit I [Hibiscus syriacus]8.6e-0725Show/hide
Query:  ISVKRSQARIAVWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRFSSGHLSLNFVRGIASKKDK-ASTSQVTPPSGL
        ++ ++ Q R  +W HF+  +L+ T+H++T+S +R+  L+S++ G  I+I  II E++  C +R     +   + L        +KD+  S + VTP +  
Subjt:  ISVKRSQARIAVWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRFSSGHLSLNFVRGIASKKDK-ASTSQVTPPSGL

Query:  NPASPPQHTPFSGPSPSPKALAIAYQQLDQIRDNLRTYWAYAKERDKAIREFYISI
                   + P    + +    +Q++Q+ D + TY++Y K RD+ +   ++ I
Subjt:  NPASPPQHTPFSGPSPSPKALAIAYQQLDQIRDNLRTYWAYAKERDKAIREFYISI

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.5e-0629.14Show/hide
Query:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRF-------------------------SSGHLSLNFVRGIASKKD
        VW HFL  RL+ T H  T+S +R++LL+S++ G  IN+G +I  EI AC  RK G                           ++G +    V  IA +  
Subjt:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRF-------------------------SSGHLSLNFVRGIASKKD

Query:  KASTSQVTPPSGLNPASPPQHTPFSGPSPSPKALAIAYQQ-----------LDQIRDNLRTYWAYAKERDKAIRE
          ST Q   PS   PA+   +          KAL     Q           L       + +WAY+KERD A+++
Subjt:  KASTSQVTPPSGLNPASPPQHTPFSGPSPSPKALAIAYQQ-----------LDQIRDNLRTYWAYAKERDKAIRE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]3.3e-0650.91Show/hide
Query:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQG
        VW HFL  RL+ T H  T+S +R++LLYS++ G  IN+G +I  EI AC  RK G
Subjt:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQG

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]3.3e-0654.55Show/hide
Query:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQG
        VW HFL  RL+ T H  T+S ERV+LLYS++ G  IN+G II  EI A   RK G
Subjt:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQG

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.7e-0728.3Show/hide
Query:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRFSSGHLSLNFVR--------------------GIASKKDKASTS
        VW HFL  RL+ T H   +S +R++LL+S++ G  IN+G +I  EI AC  +K G      L     R                     +A    +  T 
Subjt:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRFSSGHLSLNFVR--------------------GIASKKDKASTS

Query:  QVTPPSGLNPASPPQHTPFSGPSPSPKALAIAYQQLDQIRDNLRTYWAYAKERDKAIRE
            PS   PA+              KAL     Q +      + +WAY+KERD A+++
Subjt:  QVTPPSGLNPASPPQHTPFSGPSPSPKALAIAYQQLDQIRDNLRTYWAYAKERDKAIRE

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)7.1e-0729.14Show/hide
Query:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRF-------------------------SSGHLSLNFVRGIASKKD
        VW HFL  RL+ T H  T+S +R++LL+S++ G  IN+G +I  EI AC  RK G                           ++G +    V  IA +  
Subjt:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRF-------------------------SSGHLSLNFVRGIASKKD

Query:  KASTSQVTPPSGLNPASPPQHTPFSGPSPSPKALAIAYQQ-----------LDQIRDNLRTYWAYAKERDKAIRE
          ST Q   PS   PA+   +          KAL     Q           L       + +WAY+KERD A+++
Subjt:  KASTSQVTPPSGLNPASPPQHTPFSGPSPSPKALAIAYQQ-----------LDQIRDNLRTYWAYAKERDKAIRE

A0A2P5CEY2 Uncharacterized protein1.6e-0650.91Show/hide
Query:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQG
        VW HFL  RL+ T H  T+S +R++LLYS++ G  IN+G +I  EI AC  RK G
Subjt:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQG

A0A2P5CPE8 Uncharacterized protein1.6e-0654.55Show/hide
Query:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQG
        VW HFL  RL+ T H  T+S ERV+LLYS++ G  IN+G II  EI A   RK G
Subjt:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQG

A0A2P5DXM3 Uncharacterized protein8.4e-0828.3Show/hide
Query:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRFSSGHLSLNFVR--------------------GIASKKDKASTS
        VW HFL  RL+ T H   +S +R++LL+S++ G  IN+G +I  EI AC  +K G      L     R                     +A    +  T 
Subjt:  VWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRFSSGHLSLNFVR--------------------GIASKKDKASTS

Query:  QVTPPSGLNPASPPQHTPFSGPSPSPKALAIAYQQLDQIRDNLRTYWAYAKERDKAIRE
            PS   PA+              KAL     Q +      + +WAY+KERD A+++
Subjt:  QVTPPSGLNPASPPQHTPFSGPSPSPKALAIAYQQLDQIRDNLRTYWAYAKERDKAIRE

A0A6A3CYH7 Eukaryotic translation initiation factor 3 subunit I4.2e-0725Show/hide
Query:  ISVKRSQARIAVWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRFSSGHLSLNFVRGIASKKDK-ASTSQVTPPSGL
        ++ ++ Q R  +W HF+  +L+ T+H++T+S +R+  L+S++ G  I+I  II E++  C +R     +   + L        +KD+  S + VTP +  
Subjt:  ISVKRSQARIAVWLHFLNKRLMLTAHDSTISIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRFSSGHLSLNFVRGIASKKDK-ASTSQVTPPSGL

Query:  NPASPPQHTPFSGPSPSPKALAIAYQQLDQIRDNLRTYWAYAKERDKAIREFYISI
                   + P    + +    +Q++Q+ D + TY++Y K RD+ +   ++ I
Subjt:  NPASPPQHTPFSGPSPSPKALAIAYQQLDQIRDNLRTYWAYAKERDKAIREFYISI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCTCTCCTGCAGCTCCTCCAACCGTCTCACCTGCCAAGCCGAAAGCCAAATCACCTAAGAGCTGGGACACTGCCAGAGTTCGTAACAAGAGTTATCTCACAGT
ACAAGTCGCAGGAGTTCTGCCCTCACCCTCAGGAGGCAGTGGTGCCTTTAGCTTGAGAATTTTACGTCGAGCTGAGGGAGGAAAGCATGAGTATGGCAGAGTGGAAAGAG
TCCCAAACGAAGGTGAAGACATTAGTGTCAAGCGATCACAAGCCAGAATCGCAGTGTGGCTTCACTTTCTCAATAAAAGGTTGATGCTAACGGCCCATGATAGCACTATA
TCCATAGAGAGAGTTATGCTCCTCTACAGTCTTATGAAGGGTTTGGAAATCAACATAGGGAGCATAATCAGAGAGGAAATCCTTGCCTGTGGAGAAAGAAAGCAAGGAAG
ATTTTCTTCGGGTCACTTATCACTCAACTTTGTCAGAGGAATAGCATCCAAAAAAGACAAAGCTTCCACATCTCAAGTCACTCCACCATCAGGGCTGAATCCGGCTTCTC
CACCTCAACACACTCCTTTTTCAGGGCCCTCACCGTCACCTAAAGCCCTAGCAATTGCCTACCAACAACTGGATCAAATCAGGGACAATCTGAGAACTTATTGGGCATAT
GCCAAGGAGAGAGATAAAGCCATTAGAGAGTTCTACATCTCTATCGCCCGAGTATTCCTCCTGTCTTTCCTGATTTCCCTCAGTCGTTGCAGCCTCAAGAAGAAAAGGAT
TTTGATGATGATGAAGAAGATGAAAATGAAGATGAAGAAAGAGAGAGTTCCTCAGATGAGGATTAGGGGAGTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCTCTCCTGCAGCTCCTCCAACCGTCTCACCTGCCAAGCCGAAAGCCAAATCACCTAAGAGCTGGGACACTGCCAGAGTTCGTAACAAGAGTTATCTCACAGT
ACAAGTCGCAGGAGTTCTGCCCTCACCCTCAGGAGGCAGTGGTGCCTTTAGCTTGAGAATTTTACGTCGAGCTGAGGGAGGAAAGCATGAGTATGGCAGAGTGGAAAGAG
TCCCAAACGAAGGTGAAGACATTAGTGTCAAGCGATCACAAGCCAGAATCGCAGTGTGGCTTCACTTTCTCAATAAAAGGTTGATGCTAACGGCCCATGATAGCACTATA
TCCATAGAGAGAGTTATGCTCCTCTACAGTCTTATGAAGGGTTTGGAAATCAACATAGGGAGCATAATCAGAGAGGAAATCCTTGCCTGTGGAGAAAGAAAGCAAGGAAG
ATTTTCTTCGGGTCACTTATCACTCAACTTTGTCAGAGGAATAGCATCCAAAAAAGACAAAGCTTCCACATCTCAAGTCACTCCACCATCAGGGCTGAATCCGGCTTCTC
CACCTCAACACACTCCTTTTTCAGGGCCCTCACCGTCACCTAAAGCCCTAGCAATTGCCTACCAACAACTGGATCAAATCAGGGACAATCTGAGAACTTATTGGGCATAT
GCCAAGGAGAGAGATAAAGCCATTAGAGAGTTCTACATCTCTATCGCCCGAGTATTCCTCCTGTCTTTCCTGATTTCCCTCAGTCGTTGCAGCCTCAAGAAGAAAAGGAT
TTTGATGATGATGAAGAAGATGAAAATGAAGATGAAGAAAGAGAGAGTTCCTCAGATGAGGATTAGGGGAGTTTTCTAA
Protein sequenceShow/hide protein sequence
MDASPAAPPTVSPAKPKAKSPKSWDTARVRNKSYLTVQVAGVLPSPSGGSGAFSLRILRRAEGGKHEYGRVERVPNEGEDISVKRSQARIAVWLHFLNKRLMLTAHDSTI
SIERVMLLYSLMKGLEINIGSIIREEILACGERKQGRFSSGHLSLNFVRGIASKKDKASTSQVTPPSGLNPASPPQHTPFSGPSPSPKALAIAYQQLDQIRDNLRTYWAY
AKERDKAIREFYISIARVFLLSFLISLSRCSLKKKRILMMMKKMKMKMKKERVPQMRIRGVF