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Lag0028019 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028019
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationchr8:10655873..10660606
RNA-Seq ExpressionLag0028019
SyntenyLag0028019
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OAY83290.1 hypothetical protein ACMD2_22834, partial [Ananas comosus]2.5e-0433.33Show/hide
Query:  KNDLVSDGSND---SSIDMNLLLYLDHGECESAYASSLNLNSPCSSGEDKEVC--NYPVFRYEIDMEVITFRVGMKLSTKEVLKEAIKEYAMKGSFNVKM
        +++ + DG  D    S D +  L++++   ++ Y  S  L+S   S ED  V    YP FR E DM+   F +GM  ++ +  ++AI+EY++K  +N+K+
Subjt:  KNDLVSDGSND---SSIDMNLLLYLDHGECESAYASSLNLNSPCSSGEDKEVC--NYPVFRYEIDMEVITFRVGMKLSTKEVLKEAIKEYAMKGSFNVKM

Query:  VKNDK
        VKN+K
Subjt:  VKNDK

XP_028066223.1 acidic leucine-rich nuclear phosphoprotein 32 family member B-like [Camellia sinensis]4.2e-0427.27Show/hide
Query:  SHDEDISSMVSLICGDNTLHIYAEHNP-----NEEVMHPGL-------------------------NPAHTSSHSSLEFEKNDLVSDGSNDSSIDMNLLL
        ++D+DI  M SL+   NTL ++ +H+      N ++ H  L                         N     +   L+ + +D   D  +D   D++ ++
Subjt:  SHDEDISSMVSLICGDNTLHIYAEHNP-----NEEVMHPGL-------------------------NPAHTSSHSSLEFEKNDLVSDGSNDSSIDMNLLL

Query:  Y------------LDHG-ECE--SAYASSLNLNSPCSSGEDKEVCN---YPVFRYEIDMEVITFRVGMKLSTKEVLKEAIKEYAMKGSFNVKMVKNDK
        +            L  G ECE   A +S   L +P  S +DK+  N   YP FR + D++ I F++GM  ST    K+A+KEY  KG ++VK  K++K
Subjt:  Y------------LDHG-ECE--SAYASSLNLNSPCSSGEDKEVCN---YPVFRYEIDMEVITFRVGMKLSTKEVLKEAIKEYAMKGSFNVKMVKNDK

TrEMBL top hitse value%identityAlignment
A0A199W315 DBD_Tnp_Mut domain-containing protein (Fragment)1.2e-0433.33Show/hide
Query:  KNDLVSDGSND---SSIDMNLLLYLDHGECESAYASSLNLNSPCSSGEDKEVC--NYPVFRYEIDMEVITFRVGMKLSTKEVLKEAIKEYAMKGSFNVKM
        +++ + DG  D    S D +  L++++   ++ Y  S  L+S   S ED  V    YP FR E DM+   F +GM  ++ +  ++AI+EY++K  +N+K+
Subjt:  KNDLVSDGSND---SSIDMNLLLYLDHGECESAYASSLNLNSPCSSGEDKEVC--NYPVFRYEIDMEVITFRVGMKLSTKEVLKEAIKEYAMKGSFNVKM

Query:  VKNDK
        VKN+K
Subjt:  VKNDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGCTATCAGTGTTATTGACCAAATTGATGCAAGGGCAATATTCATATCTCCCATGCTGTCATACCAGGCAACTAATTTACGAGGTGCTTTCTGCCGACGTGTTGA
CTATCGCGTCGACAGAGAGCATTTCTGCCGACGCGGTGGTCAACGCGTCGGCAGAAAGCGATGGACTCGATTTTCTGCCTACGCGTTGACTTTATGTCGGGAGAAATGGC
CTCTCTTGACACGGAAGTCAACGCATCGACAAAAGCTTTTCGGAGCAATTTCTACCGACGCGTTGACTTGCGCGTTAGCAGAAATGCCCACTGCCGACACGTTGACGTAC
AATCAATTCACTCCGGGACATTCTGCTATTTTTTCGGTCAGAGCTAACTTAAGCATCAGAATGTGTGTGGTCTACACCACACCGGTGTGCAGCATTTGCTTGTCTTGCAG
TCATGATGAGGATATTTCAAGTATGGTAAGTCTCATTTGTGGGGATAACACTTTGCACATATATGCTGAACATAACCCAAATGAAGAAGTAATGCATCCAGGTTTAAATC
CTGCCCACACATCTAGTCATAGCTCTCTTGAGTTTGAAAAGAATGATCTAGTTTCTGATGGATCAAATGACTCATCTATTGATATGAATTTATTGTTGTATTTAGACCAT
GGAGAATGTGAGTCCGCTTATGCTTCATCTTTAAATCTAAATTCTCCATGTTCATCTGGTGAGGATAAAGAGGTTTGTAACTATCCAGTGTTTAGATATGAGATTGATAT
GGAGGTTATTACATTTCGAGTAGGAATGAAACTTAGCACTAAGGAGGTGTTAAAGGAAGCTATTAAGGAATATGCTATGAAGGGCTCATTTAATGTGAAAATGGTTAAGA
ATGATAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGCTATCAGTGTTATTGACCAAATTGATGCAAGGGCAATATTCATATCTCCCATGCTGTCATACCAGGCAACTAATTTACGAGGTGCTTTCTGCCGACGTGTTGA
CTATCGCGTCGACAGAGAGCATTTCTGCCGACGCGGTGGTCAACGCGTCGGCAGAAAGCGATGGACTCGATTTTCTGCCTACGCGTTGACTTTATGTCGGGAGAAATGGC
CTCTCTTGACACGGAAGTCAACGCATCGACAAAAGCTTTTCGGAGCAATTTCTACCGACGCGTTGACTTGCGCGTTAGCAGAAATGCCCACTGCCGACACGTTGACGTAC
AATCAATTCACTCCGGGACATTCTGCTATTTTTTCGGTCAGAGCTAACTTAAGCATCAGAATGTGTGTGGTCTACACCACACCGGTGTGCAGCATTTGCTTGTCTTGCAG
TCATGATGAGGATATTTCAAGTATGGTAAGTCTCATTTGTGGGGATAACACTTTGCACATATATGCTGAACATAACCCAAATGAAGAAGTAATGCATCCAGGTTTAAATC
CTGCCCACACATCTAGTCATAGCTCTCTTGAGTTTGAAAAGAATGATCTAGTTTCTGATGGATCAAATGACTCATCTATTGATATGAATTTATTGTTGTATTTAGACCAT
GGAGAATGTGAGTCCGCTTATGCTTCATCTTTAAATCTAAATTCTCCATGTTCATCTGGTGAGGATAAAGAGGTTTGTAACTATCCAGTGTTTAGATATGAGATTGATAT
GGAGGTTATTACATTTCGAGTAGGAATGAAACTTAGCACTAAGGAGGTGTTAAAGGAAGCTATTAAGGAATATGCTATGAAGGGCTCATTTAATGTGAAAATGGTTAAGA
ATGATAAAAGATGA
Protein sequenceShow/hide protein sequence
MLAISVIDQIDARAIFISPMLSYQATNLRGAFCRRVDYRVDREHFCRRGGQRVGRKRWTRFSAYALTLCREKWPLLTRKSTHRQKLFGAISTDALTCALAEMPTADTLTY
NQFTPGHSAIFSVRANLSIRMCVVYTTPVCSICLSCSHDEDISSMVSLICGDNTLHIYAEHNPNEEVMHPGLNPAHTSSHSSLEFEKNDLVSDGSNDSSIDMNLLLYLDH
GECESAYASSLNLNSPCSSGEDKEVCNYPVFRYEIDMEVITFRVGMKLSTKEVLKEAIKEYAMKGSFNVKMVKNDKR