; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028025 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028025
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:10782430..10783575
RNA-Seq ExpressionLag0028025
SyntenyLag0028025
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]2.5e-9444.05Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+CFR+P+GL KE++  MA+FWW  ++D R IHW+ WE LC+ K  GGLGFRD+E FNQALLAKQCWRIL+ P SL+  + R RY P   FLEA +G+ P
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH
        SF+WRSL WG+ELL +G RWR+G+G S  +Y   WLP   C ++ S P LP ++ V DLF+  G WN  +L+  F + + +AIL+IPL    G D LIWH
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH

Query:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVE
        +E++G +SV++GYRLA +   +    PS  +D    +W  +W L +PNK KFFLWR   D LP  + L  R I+ + +C  C+ + E  LH  W C   +
Subjt:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVE

Query:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPEGGIYGLSQTT
         +W  S + ++   + +  F E+  A++ +  G +  L     W +WN RNS  + G+ E  I  LS+ T
Subjt:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPEGGIYGLSQTT

ONI09819.1 hypothetical protein PRUPE_4G011200 [Prunus persica]4.5e-8347.97Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+CF++P+GL KE++  MA+FWW  ++D R IHW+ WE LC+ K  GGLGFRD+E FNQALLAKQCWRIL+ P SL+  + R RY P   FLEA +G+ P
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH
        SF+W SL WG+ELL +G RWR+G+G S  +Y   WLP   C ++ S P LP ++ V DLF+  G WN  +L+  F + + +AIL+IPL    G D LIWH
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH

Query:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNC
        +E++G +SV++GYRLA +   +    PS  +D    +W  +W L +PNK KFFLWR   D LP  + L  R I+ + +C  C+ + E  LH  W C
Subjt:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNC

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]5.2e-9243.89Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+CFR+P+GL KE++  MA+FWW  ++D R IHW+ WE LC+ K  GGLGFRD+E FNQALLAKQCWRIL+ P SL+  + R RY P   FLEA +G+ P
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH
        SF+WRSL WG+ELL +G RWR+GNG S  +Y   WLP     ++ S P LP +++V DLF+  G WN  +L+  F + + +A L+IPL    G D LIWH
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH

Query:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVE
        +E++G +SV++GYRLA +   +    PS  +D    +W  +W L +PNK KFFLWR   D LP  + L  R I+ + +C  C+ + E  LH  W C   +
Subjt:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVE

Query:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPE
         +W  S + ++   + +  F E+  A++ +  G +  L     W +WN RNS  + G+ E
Subjt:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPE

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]4.3e-10247.59Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+CFRLP+ LI+E H   A+FWW  S++ ++IHW++W SL  PKC GG+GFRD+ELFN+ALLAKQCWRIL  P+S++  VL+GRYF    F+EA +   P
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFS-VYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIW
        S++WRS+LWGR+LL +G RWRIGNG S  IYG NW+P +  L++ S P LP  S V+ L     GGW   V+R  F   + + IL IP+ +   EDRLIW
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFS-VYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIW

Query:  HFEKHGAFSVRTGYRLAYM-LAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVV
        ++EK G +SVR+GY++A +       PS S+ + +R WW+G W++++PNK K FLWRL  DRLPT  NL KRG+ +++ C  C    ED +HLFW C   
Subjt:  HFEKHGAFSVRTGYRLAYM-LAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVV

Query:  ECMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNS
        E +W+ SKF  L   F + R         ++L   DFE + +  W +WN RN+
Subjt:  ECMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNS

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]8.1e-8540.05Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+ F++P GL ++I + MA+FWW   +D + IHW  WE +   K  GG+GFRD+  FNQAL+AKQ WRI+Q PSSL+  VL+ RYF  +GF+ AGLGS+P
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH
        SFVWRS++WGR++L +G RWRIGNG++  +YG+NW+P+    +  S PS+   + V +L      W E ++  HF   D EAI++IPL +   ED+LIWH
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH

Query:  FEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVEC
        ++K G +SV++GY++A  +   + PS SN D  +  W  +W+L +P K K FLWR  HD LPT ENL K+ +    +C  C+  VE   H    C     
Subjt:  FEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVEC

Query:  MWLGSKFA-SLRGAF--SLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPEGGIYGLSQTTTSVPS
        +W  S  A  LRG +   +    +        + G +   V    W++W  RN   + G+ E  +  ++     V S
Subjt:  MWLGSKFA-SLRGAF--SLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPEGGIYGLSQTTTSVPS

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein1.2e-9444.05Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+CFR+P+GL KE++  MA+FWW  ++D R IHW+ WE LC+ K  GGLGFRD+E FNQALLAKQCWRIL+ P SL+  + R RY P   FLEA +G+ P
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH
        SF+WRSL WG+ELL +G RWR+G+G S  +Y   WLP   C ++ S P LP ++ V DLF+  G WN  +L+  F + + +AIL+IPL    G D LIWH
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH

Query:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVE
        +E++G +SV++GYRLA +   +    PS  +D    +W  +W L +PNK KFFLWR   D LP  + L  R I+ + +C  C+ + E  LH  W C   +
Subjt:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVE

Query:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPEGGIYGLSQTT
         +W  S + ++   + +  F E+  A++ +  G +  L     W +WN RNS  + G+ E  I  LS+ T
Subjt:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPEGGIYGLSQTT

A0A5E4FZN9 PREDICTED: retrotransposon2.5e-9243.89Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+CFR+P+GL KE++  MA+FWW  ++D R IHW+ WE LC+ K  GGLGFRD+E FNQALLAKQCWRIL+ P SL+  + R RY P   FLEA +G+ P
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH
        SF+WRSL WG+ELL +G RWR+GNG S  +Y   WLP     ++ S P LP +++V DLF+  G WN  +L+  F + + +A L+IPL    G D LIWH
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH

Query:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVE
        +E++G +SV++GYRLA +   +    PS  +D    +W  +W L +PNK KFFLWR   D LP  + L  R I+ + +C  C+ + E  LH  W C   +
Subjt:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVE

Query:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPE
         +W  S + ++   + +  F E+  A++ +  G +  L     W +WN RNS  + G+ E
Subjt:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPE

A0A6J1DAR4 uncharacterized protein LOC1110189542.1e-10247.59Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+CFRLP+ LI+E H   A+FWW  S++ ++IHW++W SL  PKC GG+GFRD+ELFN+ALLAKQCWRIL  P+S++  VL+GRYF    F+EA +   P
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFS-VYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIW
        S++WRS+LWGR+LL +G RWRIGNG S  IYG NW+P +  L++ S P LP  S V+ L     GGW   V+R  F   + + IL IP+ +   EDRLIW
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFS-VYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIW

Query:  HFEKHGAFSVRTGYRLAYM-LAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVV
        ++EK G +SVR+GY++A +       PS S+ + +R WW+G W++++PNK K FLWRL  DRLPT  NL KRG+ +++ C  C    ED +HLFW C   
Subjt:  HFEKHGAFSVRTGYRLAYM-LAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVV

Query:  ECMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNS
        E +W+ SKF  L   F + R         ++L   DFE + +  W +WN RN+
Subjt:  ECMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNS

A0A803Q1K6 Uncharacterized protein2.1e-8641.94Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+CF+LP+  I  +HR  ++FWW  S+  ++IHW  W  LCRPK  GGLGFRD+ +FNQALLAKQ WR L+ P  L   VL+  YFP+ G LEAG G+  
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH
        SFV RSL+WG++L+++G RWR+GNG S  +    WLP+ V  +V   PSLPA   V DL    G W+E  +R+ FN +D + IL IP      ED+++WH
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH

Query:  FEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRL-HLFWNCPVVE
        + K+G +SV++GYR+A  L  +     SN   +  WW  LWRLN P K K F+W++ H+ LP   NL KRGI+ S +C+ C+  VE+ + H  W C   +
Subjt:  FEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRL-HLFWNCPVVE

Query:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPD---FELVVIFWWSVWNLRNSLSWGG
          W   + + L     L   E+ +  +       D    E  ++  W++WN+RN++  GG
Subjt:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPD---FELVVIFWWSVWNLRNSLSWGG

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)1.2e-9444.05Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+CFR+P+GL KE++  MA+FWW  ++D R IHW+ WE LC+ K  GGLGFRD+E FNQALLAKQCWRIL+ P SL+  + R RY P   FLEA +G+ P
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH
        SF+WRSL WG+ELL +G RWR+G+G S  +Y   WLP   C ++ S P LP ++ V DLF+  G WN  +L+  F + + +AIL+IPL    G D LIWH
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWH

Query:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVE
        +E++G +SV++GYRLA +   +    PS  +D    +W  +W L +PNK KFFLWR   D LP  + L  R I+ + +C  C+ + E  LH  W C   +
Subjt:  FEKHGAFSVRTGYRLAYMLAVQDRPSPS-NLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVE

Query:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPEGGIYGLSQTT
         +W  S + ++   + +  F E+  A++ +  G +  L     W +WN RNS  + G+ E  I  LS+ T
Subjt:  CMWLGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFELVVIFWWSVWNLRNSLSWGGRPEGGIYGLSQTT

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.8e-4028.3Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M+   LP+ ++  + +    F W  + + ++ H + W  +C PK  GGLG R  +  N+AL++K  WR+LQE +SL   VL+ +Y    G +       P
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  ----SFVWRSLLWG-RELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQS--FPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRG
            S  WRS+  G R+++  G  W  G+G+    +   W+  +  L++ +   P+   T +  DL+    GW+ A +  +   +    +  + L    G
Subjt:  ----SFVWRSLLWG-RELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQS--FPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRG

Query:  -EDRLIWHFEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLF
          DRL W F + G FSVR+ Y    ML V + P P+    M ++++ LW++ VP + K FLW + +  + T+E   +R +S S++C +C   VE  LH+ 
Subjt:  -EDRLIWHFEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLF

Query:  WNCPVVECMWLG-SKFASLRGAFSLFRFEEIVGAMKD-----NLPGPDFELVVIFWWSVWNLRN
         +CP    +W+        +G FS   FE +   + D     ++P      V+I+W   W   N
Subjt:  WNCPVVECMWLG-SKFASLRGAFSLFRFEEIVGAMKD-----NLPGPDFELVVIFWWSVWNLRN

P93295 Uncharacterized mitochondrial protein AtMg003104.2e-3647.55Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPK-CMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSR
        M+CFRL + L K++   M +FWW+  E+ R+I W++W+ LC+ K   GGLGFRD+  FNQALLAKQ +RI+ +P +L+  +LR RYFP S  +E  +G+R
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPK-CMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSR

Query:  PSFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCL
        PS+ WRS++ GRELL RG    IG+G  T ++   W+  E  L
Subjt:  PSFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCL

Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.6e-1424.23Show/hide
Query:  LMCSVLRGRYFPQSGFLEAGLGSRPSFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHF
        L+ S L   +  Q  F      +  S++WR L   RE+        +G+G +   +  NW               P   +V  L     G          
Subjt:  LMCSVLRGRYFPQSGFLEAGLGSRPSFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHF

Query:  NESDCEAILRIPLQQDRGEDRLIWHFEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVS
             +A+  I  Q D   D  IW  + H   ++ +  + +  L  Q+   P        W+  +W  N   KH F  W +  +RL T++ L   G+S+ 
Subjt:  NESDCEAILRIPLQQDRGEDRLIWHFEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVS

Query:  SLCTLCNDQVEDRLHLFWNCPVVECMW
        ++C LCN   E R HLF+ CP    +W
Subjt:  SLCTLCNDQVEDRLHLFWNCPVVECMW

AT3G09510.1 Ribonuclease H-like superfamily protein3.7e-2727.78Show/hide
Query:  LRGRYFPQSGFLEAGLGSRPSFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATS-------MVNDLFSVYGG---WNEAV
        ++ RYF     L+A +  + S+ W SLL G  LL +G R  IG+G++  I   N         V S P  P  +        +N+LF   G    W+++ 
Subjt:  LRGRYFPQSGFLEAGLGSRPSFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATS-------MVNDLFSVYGG---WNEAV

Query:  LRAHFNESDCEAILRIPLQQDRGEDRLIWHFEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKR
        +    ++SD   I RI L + +  D++IW++   G ++VR+GY L       + P+ +         + +W L +  K K FLWR     L T E L  R
Subjt:  LRAHFNESDCEAILRIPLQQDRGEDRLIWHFEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKR

Query:  GISVSSLCTLCNDQVEDRLHLFWNCPVVECMWLGSKFASLRGAFSLFRFEE----IVGAMKDNLPGPDFELVVIFW--WSVWNLRNSL
        G+ +   C  C+ + E   H  + CP     W  S  + +R       FEE    I+  ++D     DF  ++  W  W +W  RN++
Subjt:  GISVSSLCTLCNDQVEDRLHLFWNCPVVECMWLGSKFASLRGAFSLFRFEE----IVGAMKDNLPGPDFELVVIFW--WSVWNLRNSL

AT4G29090.1 Ribonuclease H-like superfamily protein1.3e-5332.17Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP
        M CF LP+ + K+I   +A FWW   ++A+ +HW +W+ L   K  GG+GF+D+E FN ALL KQ WR+L  P SLM  V + RYF +S  L A LGSRP
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRP

Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWL---PKEVCLQVQSFP-----SLPATSMVNDLFSVYG-GWNEAVLRAHFNESDCEAILRIPLQQD
        SFVW+S+   +E+L +G R  +GNG    I+   WL   P    L++Q  P     S+ +   V+DL    G  W + V+   F E + + I  +     
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWL---PKEVCLQVQSFP-----SLPATSMVNDLFSVYG-GWNEAVLRAHFNESDCEAILRIPLQQD

Query:  RGEDRLIWHFEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDR--MRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRL
        R  D   W +   G ++V++GY +   + +  R SP  +    +   +  +W+     K + FLW+   + LP    L  R +S  S C  C    E   
Subjt:  RGEDRLIWHFEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDR--MRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRL

Query:  HLFWNCPVVECMW-LGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFE----LVVIFWWSVWNLRNSLSWGGR
        HL + C      W + S    L G ++   +  +          P +E    LV    W +W  RN L + GR
Subjt:  HLFWNCPVVECMW-LGSKFASLRGAFSLFRFEEIVGAMKDNLPGPDFE----LVVIFWWSVWNLRNSLSWGGR

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-1124.76Show/hide
Query:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQS-----FPSLPATSMVNDLFSVYGGW------NEAVLRAHFNESDCEAILRIPLQ
        S++W+S+   R +       ++G+G +   +  NW      + +          LP  + V D       W         +++   N     ++  + LQ
Subjt:  SFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQS-----FPSLPATSMVNDLFSVYGGW------NEAVLRAHFNESDCEAILRIPLQ

Query:  QDRGEDRLIWHFEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRL
         D  +D  +W   K G      G+  A    +   P    +D    W   +W      KH F  W     RLPT++ LL  G+ V SLC LCN   E R 
Subjt:  QDRGEDRLIWHFEKHGAFSVRTGYRLAYMLAVQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRL

Query:  HLFWNC
        HLF++C
Subjt:  HLFWNC

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.0e-3747.55Show/hide
Query:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPK-CMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSR
        M+CFRL + L K++   M +FWW+  E+ R+I W++W+ LC+ K   GGLGFRD+  FNQALLAKQ +RI+ +P +L+  +LR RYFP S  +E  +G+R
Subjt:  MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPK-CMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSR

Query:  PSFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCL
        PS+ WRS++ GRELL RG    IG+G  T ++   W+  E  L
Subjt:  PSFVWRSLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPKEVCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGCTTCCGGTTGCCCAGGGGACTGATCAAAGAAATCCACAGGACTATGGCTAAGTTTTGGTGGAATGGGTCGGAGGATGCAAGACGAATCCATTGGATGAGCTG
GGAGTCGTTGTGCCGTCCCAAGTGCATGGGTGGGTTGGGGTTTCGAGACATGGAACTTTTTAACCAAGCTCTGTTGGCCAAGCAGTGTTGGCGGATACTTCAGGAGCCTT
CTTCTCTTATGTGTTCTGTGCTCAGGGGCCGCTATTTTCCCCAGTCAGGTTTCCTAGAGGCAGGTCTTGGATCGAGACCGTCGTTTGTATGGCGTAGTTTGTTATGGGGG
CGGGAGCTTTTGGTTCGAGGTTGTCGTTGGAGGATAGGTAATGGACGATCTACGCCTATTTATGGTTCAAACTGGCTGCCGAAGGAGGTCTGCCTTCAGGTACAGTCGTT
CCCATCACTTCCTGCTACTAGTATGGTTAATGATCTTTTTTCTGTTTATGGGGGCTGGAACGAGGCTGTGCTTAGAGCCCATTTTAACGAGTCGGACTGTGAAGCCATTT
TGAGAATCCCGCTGCAGCAGGATCGGGGGGAGGATCGTTTAATTTGGCATTTTGAGAAGCATGGAGCCTTTTCTGTGAGGACTGGGTATCGGCTTGCTTATATGTTGGCT
GTGCAGGACCGACCTTCACCTTCGAACCTGGACAGGATGCGTGCGTGGTGGTCTGGCCTTTGGAGGCTGAATGTGCCTAATAAGCACAAGTTCTTCTTATGGCGACTGTT
CCATGATCGGTTGCCTACTAAGGAAAACCTTCTCAAGCGGGGCATCAGTGTCTCTAGCCTGTGTACTTTGTGTAATGATCAAGTTGAGGACCGTCTGCATCTGTTTTGGA
ATTGCCCTGTGGTTGAGTGTATGTGGTTGGGCTCCAAGTTTGCCTCGTTGCGTGGGGCTTTTTCGCTATTCAGGTTCGAGGAAATTGTTGGGGCGATGAAGGATAATCTT
CCCGGGCCGGATTTTGAGCTGGTGGTCATTTTTTGGTGGTCAGTATGGAACCTCCGAAACAGTCTGAGTTGGGGTGGTCGGCCAGAGGGCGGGATCTATGGGCTTTCTCA
AACGACTACCTCAGTGCCTTCCATGGGGGTGGGAGGCGTTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGCTTCCGGTTGCCCAGGGGACTGATCAAAGAAATCCACAGGACTATGGCTAAGTTTTGGTGGAATGGGTCGGAGGATGCAAGACGAATCCATTGGATGAGCTG
GGAGTCGTTGTGCCGTCCCAAGTGCATGGGTGGGTTGGGGTTTCGAGACATGGAACTTTTTAACCAAGCTCTGTTGGCCAAGCAGTGTTGGCGGATACTTCAGGAGCCTT
CTTCTCTTATGTGTTCTGTGCTCAGGGGCCGCTATTTTCCCCAGTCAGGTTTCCTAGAGGCAGGTCTTGGATCGAGACCGTCGTTTGTATGGCGTAGTTTGTTATGGGGG
CGGGAGCTTTTGGTTCGAGGTTGTCGTTGGAGGATAGGTAATGGACGATCTACGCCTATTTATGGTTCAAACTGGCTGCCGAAGGAGGTCTGCCTTCAGGTACAGTCGTT
CCCATCACTTCCTGCTACTAGTATGGTTAATGATCTTTTTTCTGTTTATGGGGGCTGGAACGAGGCTGTGCTTAGAGCCCATTTTAACGAGTCGGACTGTGAAGCCATTT
TGAGAATCCCGCTGCAGCAGGATCGGGGGGAGGATCGTTTAATTTGGCATTTTGAGAAGCATGGAGCCTTTTCTGTGAGGACTGGGTATCGGCTTGCTTATATGTTGGCT
GTGCAGGACCGACCTTCACCTTCGAACCTGGACAGGATGCGTGCGTGGTGGTCTGGCCTTTGGAGGCTGAATGTGCCTAATAAGCACAAGTTCTTCTTATGGCGACTGTT
CCATGATCGGTTGCCTACTAAGGAAAACCTTCTCAAGCGGGGCATCAGTGTCTCTAGCCTGTGTACTTTGTGTAATGATCAAGTTGAGGACCGTCTGCATCTGTTTTGGA
ATTGCCCTGTGGTTGAGTGTATGTGGTTGGGCTCCAAGTTTGCCTCGTTGCGTGGGGCTTTTTCGCTATTCAGGTTCGAGGAAATTGTTGGGGCGATGAAGGATAATCTT
CCCGGGCCGGATTTTGAGCTGGTGGTCATTTTTTGGTGGTCAGTATGGAACCTCCGAAACAGTCTGAGTTGGGGTGGTCGGCCAGAGGGCGGGATCTATGGGCTTTCTCA
AACGACTACCTCAGTGCCTTCCATGGGGGTGGGAGGCGTTGTCTAA
Protein sequenceShow/hide protein sequence
MNCFRLPRGLIKEIHRTMAKFWWNGSEDARRIHWMSWESLCRPKCMGGLGFRDMELFNQALLAKQCWRILQEPSSLMCSVLRGRYFPQSGFLEAGLGSRPSFVWRSLLWG
RELLVRGCRWRIGNGRSTPIYGSNWLPKEVCLQVQSFPSLPATSMVNDLFSVYGGWNEAVLRAHFNESDCEAILRIPLQQDRGEDRLIWHFEKHGAFSVRTGYRLAYMLA
VQDRPSPSNLDRMRAWWSGLWRLNVPNKHKFFLWRLFHDRLPTKENLLKRGISVSSLCTLCNDQVEDRLHLFWNCPVVECMWLGSKFASLRGAFSLFRFEEIVGAMKDNL
PGPDFELVVIFWWSVWNLRNSLSWGGRPEGGIYGLSQTTTSVPSMGVGGVV