; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028028 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028028
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionchromatin-remodeling protein 11
Genome locationchr8:10818065..10824966
RNA-Seq ExpressionLag0028028
SyntenyLag0028028
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0031491 - nucleosome binding (molecular function)
GO:0070615 - nucleosome-dependent ATPase activity (molecular function)
InterPro domainsIPR000330 - SNF2, N-terminal
IPR038718 - SNF2-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD6344230.1 unnamed protein product, partial [Miscanthus lutarioriparius]7.2e-1479.63Show/hide
Query:  LSMGYERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVSK
        + M  E NLHELW+LLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHK+ K
Subjt:  LSMGYERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVSK

GFZ14038.1 chromatin remodeling factor17 [Actinidia rufa]1.2e-1391.49Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        E NLHELWSLLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

KAE9591401.1 putative calcium/calmodulin-dependent protein kinase chromatin remodeling SNF2 family [Lupinus albus]1.6e-1385.71Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVSK
        + NLHELWSLLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKV +
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVSK

KAG5554959.1 hypothetical protein RHGRI_012488 [Rhododendron griersonianum]1.4e-1481.13Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVSKFSYN
        + NLHELWSLLNFLL EIFSS+ETFDEWFQIS ENDQQEVVQQLHKV+  ++N
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVSKFSYN

PSR92641.1 ISWI chromatin-remodeling complex ATPase like [Actinidia chinensis var. chinensis]9.4e-1489.58Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVS
        + NLHELWSLLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKVS
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVS

TrEMBL top hitse value%identityAlignment
A0A2G5F0S7 Uncharacterized protein1.0e-1389.36Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        + NLHELWSLLNFLL EIFSS+ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

A0A2R6PJX4 ISWI chromatin-remodeling complex ATPase like4.6e-1489.58Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVS
        + NLHELWSLLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKVS
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVS

A0A6A1VMK6 Putative chromatin-remodeling complex ATPase chain1.0e-1389.36Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        + NLHELWSLLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

A0A6A4NR13 Putative calcium/calmodulin-dependent protein kinase chromatin remodeling SNF2 family7.8e-1485.71Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVSK
        + NLHELWSLLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKV +
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVSK

A0A7J0GTD2 Chromatin remodeling factor175.9e-1491.49Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        E NLHELWSLLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

SwissProt top hitse value%identityAlignment
F4JY24 ISWI chromatin-remodeling complex ATPase CHR171.0e-1585.11Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        + NLHELW+LLNFLL E+FSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

P38144 ISWI chromatin-remodeling complex ATPase ISW14.7e-0858.33Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQI-SRENDQQEVVQQLHKV
        + NLHELW+LLNFLL +IFS  + FD+WF   S E DQ ++V+QLH V
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQI-SRENDQQEVVQQLHKV

Q08773 ISWI chromatin-remodeling complex ATPase ISW27.2e-0962.5Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWF-QISRENDQQEVVQQLHKV
        + NLHELW+LLNFLL +IF  +E FDEWF Q + E DQ+ V+QQLH V
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWF-QISRENDQQEVVQQLHKV

Q7G8Y3 Probable chromatin-remodeling complex ATPase chain3.6e-1689.36Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        + NLHELWSLLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

Q8RWY3 ISWI chromatin-remodeling complex ATPase CHR118.0e-1687.23Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        + NLHELW+LLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

Arabidopsis top hitse value%identityAlignment
AT3G06400.1 chromatin-remodeling protein 115.7e-1787.23Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        + NLHELW+LLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

AT3G06400.2 chromatin-remodeling protein 115.7e-1787.23Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        + NLHELW+LLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

AT3G06400.3 chromatin-remodeling protein 115.7e-1787.23Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        + NLHELW+LLNFLL EIFSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

AT5G18620.1 chromatin remodeling factor177.4e-1785.11Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        + NLHELW+LLNFLL E+FSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV

AT5G18620.2 chromatin remodeling factor177.4e-1785.11Show/hide
Query:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV
        + NLHELW+LLNFLL E+FSS ETFDEWFQIS ENDQQEVVQQLHKV
Subjt:  ERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGTTTGTCGATGATGCTCCCTTGTTGCCATTTGGTTTTTGTGTCATACCATTGGAGCCCAAACCAGTTTGTGATTGTACTTGCACACTATGATTTCATTGGAAA
ATTTGCACTTTCTATGGGATATGAACGAAATCTTCATGAATTATGGTCTCTCCTCAATTTCCTTTTGTCTGAAATATTTAGTTCAACAGAGACTTTTGATGAATGGTTTC
AAATTTCTAGGGAAAATGATCAACAGGAGGTTGTTCAACAACTTCACAAGGTTTCAAAGTTCTCCTACAATAATCCATTGCAAATATTTTACAAGCTCCAAGATTACCTT
TTTGATGACACAAATGATAAAAGGGATATTCTTGAAAAGAAGCTCGAAGATGAACTTGGGAAAGAGCATTTTAGTCCTCGTGGGATCGATACCCTTGTAATACTTCTAAG
CTTACCACGCACCAGTCACCAGGATAAGGTTGGCGATTGGCAGCTTCGGTTCAACTTTAAAGATTGGCAGTTGACAGCTTCGCTTCATCTTCATAGGTCTGTGGTTGGCG
GCTCCGCTTTGACTTCAACTTCAGAGGTTGACGGTTCACAACTTCGCTTCAACTTTAGAGCGTCGAGACGCTTAGCAAGGCAGCGTCGCGACGCTGCCCTTTCTTGTTGC
CCAAGCCGCGTGCGCAGCAGCGTCGCGACGCTTAGCAAGGCAGCGTCGCAACGCTACCCCTATTCCAGGCCTATAAATAGGCGCCCTTGGTGCCTCATTTCTGATCAATC
CATCAACCAAGCCATCAATCCTTTCTTTCCTTTCTTAAGGCTCCTTTTTTGGAGCCCCTCTCAAGGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGTTTGTCGATGATGCTCCCTTGTTGCCATTTGGTTTTTGTGTCATACCATTGGAGCCCAAACCAGTTTGTGATTGTACTTGCACACTATGATTTCATTGGAAA
ATTTGCACTTTCTATGGGATATGAACGAAATCTTCATGAATTATGGTCTCTCCTCAATTTCCTTTTGTCTGAAATATTTAGTTCAACAGAGACTTTTGATGAATGGTTTC
AAATTTCTAGGGAAAATGATCAACAGGAGGTTGTTCAACAACTTCACAAGGTTTCAAAGTTCTCCTACAATAATCCATTGCAAATATTTTACAAGCTCCAAGATTACCTT
TTTGATGACACAAATGATAAAAGGGATATTCTTGAAAAGAAGCTCGAAGATGAACTTGGGAAAGAGCATTTTAGTCCTCGTGGGATCGATACCCTTGTAATACTTCTAAG
CTTACCACGCACCAGTCACCAGGATAAGGTTGGCGATTGGCAGCTTCGGTTCAACTTTAAAGATTGGCAGTTGACAGCTTCGCTTCATCTTCATAGGTCTGTGGTTGGCG
GCTCCGCTTTGACTTCAACTTCAGAGGTTGACGGTTCACAACTTCGCTTCAACTTTAGAGCGTCGAGACGCTTAGCAAGGCAGCGTCGCGACGCTGCCCTTTCTTGTTGC
CCAAGCCGCGTGCGCAGCAGCGTCGCGACGCTTAGCAAGGCAGCGTCGCAACGCTACCCCTATTCCAGGCCTATAAATAGGCGCCCTTGGTGCCTCATTTCTGATCAATC
CATCAACCAAGCCATCAATCCTTTCTTTCCTTTCTTAAGGCTCCTTTTTTGGAGCCCCTCTCAAGGCTTTTGA
Protein sequenceShow/hide protein sequence
MNCLSMMLPCCHLVFVSYHWSPNQFVIVLAHYDFIGKFALSMGYERNLHELWSLLNFLLSEIFSSTETFDEWFQISRENDQQEVVQQLHKVSKFSYNNPLQIFYKLQDYL
FDDTNDKRDILEKKLEDELGKEHFSPRGIDTLVILLSLPRTSHQDKVGDWQLRFNFKDWQLTASLHLHRSVVGGSALTSTSEVDGSQLRFNFRASRRLARQRRDAALSCC
PSRVRSSVATLSKAASQRYPYSRPINRRPWCLISDQSINQAINPFFPFLRLLFWSPSQGF