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Lag0028030 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028030
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPCI domain-containing protein
Genome locationchr8:10883500..10884894
RNA-Seq ExpressionLag0028030
SyntenyLag0028030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A6A4LCL8 PCI domain-containing protein (Fragment)9.6e-0458.14Show/hide
Query:  QDDDVANAKTLINKASFLVYYVRIIDMKRKFLEAIMIYLKLKR
        +DDD  NA+  INKASFLV Y RI+D+KRKFLEA + Y  + +
Subjt:  QDDDVANAKTLINKASFLVYYVRIIDMKRKFLEAIMIYLKLKR
SwissProt top hitse value%identityAlignment
Q8L5U0 COP9 signalosome complex subunit 47.1e-0450Show/hide
Query:  QDDDVANAKTLINKASFL--------------VYYVRIIDMKRKFLEAIMIY
        +DDD  NA+  INKASFL              V Y RI+DMKRKFLEA + Y
Subjt:  QDDDVANAKTLINKASFL--------------VYYVRIIDMKRKFLEAIMIY
Arabidopsis top hitse value%identityAlignment
AT5G42970.1 Proteasome component (PCI) domain protein5.0e-0550Show/hide
Query:  QDDDVANAKTLINKASFL--------------VYYVRIIDMKRKFLEAIMIY
        +DDD  NA+  INKASFL              V Y RI+DMKRKFLEA + Y
Subjt:  QDDDVANAKTLINKASFL--------------VYYVRIIDMKRKFLEAIMIY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAAGATGATGATGTTGCTAATGCTAAGACTCTTATCAATAAAGCTTCATTCTTGGTTTACTATGTTAGGATCATAGACATGAAAAGGAAGTTCTTGGAAGCAAT
TATGATATATCTCAAATTGAAAAGAGACAAATATGAGATAAACTCTCTCCCCCCCTCAGCTTCCTCTCGTCCACCGCCGCCTCCATCGCCGTCGCACTCCGCTGCGCTGC
CACCATCGCCGCAAGTCGTCCGTCGGTCTCTGCCCGCCAGCGTCGCTCTCAGCCCTCTCTCGCCACCGCTCCACCGTCGTCGCACGAATCTGTACGCTGCCACCATTCAG
ATCTGCTTGTTTCTGTCGTTTGAATCGATCGCCGCCGCCACCGCCTTAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAAGATGATGATGTTGCTAATGCTAAGACTCTTATCAATAAAGCTTCATTCTTGGTTTACTATGTTAGGATCATAGACATGAAAAGGAAGTTCTTGGAAGCAAT
TATGATATATCTCAAATTGAAAAGAGACAAATATGAGATAAACTCTCTCCCCCCCTCAGCTTCCTCTCGTCCACCGCCGCCTCCATCGCCGTCGCACTCCGCTGCGCTGC
CACCATCGCCGCAAGTCGTCCGTCGGTCTCTGCCCGCCAGCGTCGCTCTCAGCCCTCTCTCGCCACCGCTCCACCGTCGTCGCACGAATCTGTACGCTGCCACCATTCAG
ATCTGCTTGTTTCTGTCGTTTGAATCGATCGCCGCCGCCACCGCCTTAAGATAA
Protein sequenceShow/hide protein sequence
MRQDDDVANAKTLINKASFLVYYVRIIDMKRKFLEAIMIYLKLKRDKYEINSLPPSASSRPPPPPSPSHSAALPPSPQVVRRSLPASVALSPLSPPLHRRRTNLYAATIQ
ICLFLSFESIAAATALR