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Lag0028036 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028036
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr8:11090258..11091339
RNA-Seq ExpressionLag0028036
SyntenyLag0028036
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021738280.1 uncharacterized protein LOC110704778 [Chenopodium quinoa]1.2e-0550.91Show/hide
Query:  NLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK
        N + F    PFPSRL+ + K  ++E+EK  LD+F+K EVNIPLL+AI+Q+P+  K
Subjt:  NLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK

XP_021775751.1 uncharacterized protein LOC110739607 [Chenopodium quinoa]2.0e-0550.91Show/hide
Query:  NLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK
        N + F    PFPSRL+ + K  ++E+EK  LD+F+K EVNIPLL+AI+Q+P+  K
Subjt:  NLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK

XP_037494808.1 uncharacterized protein LOC119370546 [Jatropha curcas]3.1e-0653.09Show/hide
Query:  KKPENGKKDESNFPKKRGVHFDPPLN-LNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK
        KK + G KD S+ P+   V  +  LN  N+FV   PFPSRLA   K  KEE+EK  L++F+K EVNIPL+DAIKQIP+  K
Subjt:  KKPENGKKDESNFPKKRGVHFDPPLN-LNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK

XP_038877406.1 uncharacterized protein LOC120069694 [Benincasa hispida]2.0e-0546.59Show/hide
Query:  IEEDKERK--KPENGKKDESNFP--KKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPK
        +E  KE K   PE    D++ FP   K+GV   P   L+++VPKA FPS+LA   KP   +  +  L++F++ E+NIPLLDAIKQIPK
Subjt:  IEEDKERK--KPENGKKDESNFP--KKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPK

XP_038902388.1 uncharacterized protein LOC120089029 [Benincasa hispida]1.6e-0756.45Show/hide
Query:  VHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK
        V  D  L LN++VPKAPFPSRLA +PK    +++K  L++F++ E+NIPLL+AIKQIPK  K
Subjt:  VHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK

TrEMBL top hitse value%identityAlignment
A0A5D3DCG3 Retrotransposon gag protein1.3e-0539.13Show/hide
Query:  EEDKERKKPENGKKDESNFPKKRGVHFDPPLN-LNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLKEQSQQ
        E+ +    P N K D+S            PLN    ++PK PFPSRLAL+ K + EEEE   L++F+K ++N+ LLDAI+Q+P+ L ++ ++
Subjt:  EEDKERKKPENGKKDESNFPKKRGVHFDPPLN-LNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLKEQSQQ

A0A6P6S510 uncharacterized protein LOC1136874732.2e-0542.53Show/hide
Query:  IEEDKERKKPENGKKDESNFPKKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK
        I +DK+ ++ E   ++E    K   V  DP + + +  P  PFPSRL    KP K+++EK  L++F+K E+NIPLLDAIKQ+P+  K
Subjt:  IEEDKERKKPENGKKDESNFPKKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK

A0A6P6WXU6 uncharacterized protein LOC1137371331.3e-0542.53Show/hide
Query:  IEEDKERKKPENGKKDESNFPKKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK
        I +DK+ ++ E   ++ES   K   V  DP + + +  P  PFP+RL    KP K+++EK  L++F+K E+NIPLLDAIKQ+P+  K
Subjt:  IEEDKERKKPENGKKDESNFPKKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK

A0A6P6WZD1 uncharacterized protein LOC1137377042.2e-0544.83Show/hide
Query:  IEEDKERKKPENGKKDESNFPKKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK
        I +DK+  + E   ++E    K   V  DP + + S  P  PFPSRL    KP K+++EK  L++F+K E+NIPLLDAIKQ+PK  K
Subjt:  IEEDKERKKPENGKKDESNFPKKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK

A0A6P6X091 uncharacterized protein LOC1137373062.2e-0544.83Show/hide
Query:  IEEDKERKKPENGKKDESNFPKKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK
        I +DK+ +K EN  + E++      V  DP + + +  P  PFPSRL    KP K+++EK  L++F+K E+NIPLLDAIKQ+PK  K
Subjt:  IEEDKERKKPENGKKDESNFPKKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAIKQIPKGLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTCGGGAGAAGGAGGGGGGAATGGAGAAGAAGGGGGAAAGAATAGGAGGTTGGGAGGATGAGGGGGATGGAGAACGTGGGAAGAGAATTGAAGAAGATAAAGA
AAGGAAGAAGCCTGAAAATGGGAAGAAAGACGAGTCCAACTTTCCTAAGAAGCGAGGGGTACATTTCGATCCACCCTTAAATTTAAATTCTTTTGTTCCTAAAGCTCCGT
TTCCTAGCAGGTTAGCGTTGCAGCCTAAGCCTTCCAAGGAAGAGGAGGAGAAGAACAAGCTTGATCTATTCAAGAAGACGGAGGTCAACATCCCGCTTTTGGACGCCATT
AAGCAGATTCCTAAGGGACTAAAAGAGCAATCTCAACAATTGGAACACCACCATTTTGCCTTCCCCACTATAAATCTGAGATTAAGAACTTGGTTGTGGGACCAATCGGT
TCTTTATCTTGAATTTTGGGATGAACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTCGGGAGAAGGAGGGGGGAATGGAGAAGAAGGGGGAAAGAATAGGAGGTTGGGAGGATGAGGGGGATGGAGAACGTGGGAAGAGAATTGAAGAAGATAAAGA
AAGGAAGAAGCCTGAAAATGGGAAGAAAGACGAGTCCAACTTTCCTAAGAAGCGAGGGGTACATTTCGATCCACCCTTAAATTTAAATTCTTTTGTTCCTAAAGCTCCGT
TTCCTAGCAGGTTAGCGTTGCAGCCTAAGCCTTCCAAGGAAGAGGAGGAGAAGAACAAGCTTGATCTATTCAAGAAGACGGAGGTCAACATCCCGCTTTTGGACGCCATT
AAGCAGATTCCTAAGGGACTAAAAGAGCAATCTCAACAATTGGAACACCACCATTTTGCCTTCCCCACTATAAATCTGAGATTAAGAACTTGGTTGTGGGACCAATCGGT
TCTTTATCTTGAATTTTGGGATGAACAGTAG
Protein sequenceShow/hide protein sequence
MEGREKEGGMEKKGERIGGWEDEGDGERGKRIEEDKERKKPENGKKDESNFPKKRGVHFDPPLNLNSFVPKAPFPSRLALQPKPSKEEEEKNKLDLFKKTEVNIPLLDAI
KQIPKGLKEQSQQLEHHHFAFPTINLRLRTWLWDQSVLYLEFWDEQ