; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028041 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028041
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:11335963..11337163
RNA-Seq ExpressionLag0028041
SyntenyLag0028041
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO61345.1 reverse transcriptase [Corchorus capsularis]1.3e-1531.82Show/hide
Query:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLFN
        E L + WE FNLT +EE  EV VDP   + T       LIGKLLS R  + EVMR     VW +  GL V ++G NLF+F   S+ E+ RV +Q PW FN
Subjt:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLFN

Query:  K--FSAGAFQAYSYGE-----GTSY---------GVQTEGKQKVLGSTGIEVRLDDPLGS--CWS-------------------------------LIRY
        K      ++ AY   E     G S+         G   E   +V+G +   V   D  G    W                                  RY
Subjt:  K--FSAGAFQAYSYGE-----GTSY---------GVQTEGKQKVLGSTGIEVRLDDPLGS--CWS-------------------------------LIRY

Query:  EKLPELCSFCGIIGHTTHNC-NSFYMDSGSPSQQHQYGMWLQ
        EKLP+ C  CG + H  + C  +  M         +YG WL+
Subjt:  EKLPELCSFCGIIGHTTHNC-NSFYMDSGSPSQQHQYGMWLQ

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.0e-2028.46Show/hide
Query:  MALEDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIP-TGLTVEKLGVNLFLFSLNSEEEQIRVLKQEP
        MA  +L E W+ F LT +E++  VD+D +A E T K L  +LI KLLS R  S  V++   K  W +     +V+ +G N+FLF+ N   ++ R+L+  P
Subjt:  MALEDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIP-TGLTVEKLGVNLFLFSLNSEEEQIRVLKQEP

Query:  WLFNKF---------------------------------------------SAGAFQ-----AYSYGEGTSYGVQTEGKQKVLGSTGIEVRLDDPLGSCW
        W F++                                              + G F+     A ++  G+   V+           GI++ LD P+G CW
Subjt:  WLFNKF---------------------------------------------SAGAFQ-----AYSYGEGTSYGVQTEGKQKVLGSTGIEVRLDDPLGSCW

Query:  SLIRYEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQQHQYGMWLQYIGHSTT
          I+YE+LP+    CG + H   +C+   +D  S S+  QYG WL++ GH  +
Subjt:  SLIRYEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQQHQYGMWLQYIGHSTT

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.3e-2831.3Show/hide
Query:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLFN
        E+L  +W+KF LT +E+E  +DVD  A ++  + L Y+L+GKLL+ R+ S +V+ +     W +   LTVE +G NLFLF    E +  RV+K  PW F+
Subjt:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLFN

Query:  K------------------FSAGAF---------------QAYSYGEGTSYGVQTEGKQKVLG-----------------STGIEVRLDDPLGSCWSLIR
        K                  F+  AF                A   G      V  +  +K                      GI++ +D P+G CW  I+
Subjt:  K------------------FSAGAF---------------QAYSYGEGTSYGVQTEGKQKVLG-----------------STGIEVRLDDPLGSCWSLIR

Query:  YEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQ-QHQYGMWLQYIG
        YE+LP+ C FCG+IGH++H+C++ Y+ +   S+   +YG WL+++G
Subjt:  YEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQ-QHQYGMWLQYIG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.9e-1525.06Show/hide
Query:  MALEDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIP-TGLTVEKLGVNLFLFSLNSEEEQIRVLKQEP
        MA  DL E W+ F LT +EEET +DVD +A   T   L   L+GKL   R  +  VM+   ++ W +      V+ LG NLFLFS     ++ ++ K  P
Subjt:  MALEDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIP-TGLTVEKLGVNLFLFSLNSEEEQIRVLKQEP

Query:  WLFNKF---------------------------------------------SAGAFQAYSYGE-----GTSYGVQTEGKQKVLGSTGIEVRLDDPLGSCW
        W F++                                              + G F+     +     G++  V+           GI++ LD P+G  W
Subjt:  WLFNKF---------------------------------------------SAGAFQAYSYGE-----GTSYGVQTEGKQKVLGSTGIEVRLDDPLGSCW

Query:  SLIRYEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQQHQYGMWLQYIGHSTTFFRSPSTSPMGQNKIMVDIQD-DGNRSKETDADKIPSFLRSGSGEVD
          I+YE+LP+ C  CG+                S  ++HQYG WL+Y G        P+   M Q +   D+ D  GN S  +    +      G+G   
Subjt:  SLIRYEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQQHQYGMWLQYIGHSTTFFRSPSTSPMGQNKIMVDIQD-DGNRSKETDADKIPSFLRSGSGEVD

Query:  PQTHDSGNK---PMEISPVIEEAVTVPVQSTHPSGQVINGCVTSDLSRAKKKLDFADVT-LSPLIKPVSIVQPPGVFPSMAHEEPKP
         Q+  +      PME SPV E     P +   PS Q   G     +   +++++  +++ L+P +K  +    P    S+   +  P
Subjt:  PQTHDSGNK---PMEISPVIEEAVTVPVQSTHPSGQVINGCVTSDLSRAKKKLDFADVT-LSPLIKPVSIVQPPGVFPSMAHEEPKP

XP_030923276.1 uncharacterized protein LOC115950175 [Quercus lobata]2.4e-1426.28Show/hide
Query:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLFN
        +D+    EK  LT +EEE  +++     +   +S   +LIGK L+ R F+ +      K  W +  GL + ++G NLF     +E E  RV K  PW F+
Subjt:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLFN

Query:  ------------------KFSAGAFQAYSYGE-------------GTSYG--VQTEGKQKVLG-STGIEVRLDDPLG---------------SCWSLIRY
                          +F + A     +G              G+  G  V+ E KQ+V G S  + V++  P+                S W   +Y
Subjt:  ------------------KFSAGAFQAYSYGE-------------GTSYG--VQTEGKQKVLG-STGIEVRLDDPLG---------------SCWSLIRY

Query:  EKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQQH-QYGMWLQYIGHSTTFFRSPSTSPMGQNKIMVDIQDDGNRSKETDADKIPSFLRSGSGE
        E+LP  C FCG++GH   +C  ++  + +  +   QYG WL+ +G+ T   RSPS     + ++ V++    +R KE      P+ +   S E
Subjt:  EKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQQH-QYGMWLQYIGHSTTFFRSPSTSPMGQNKIMVDIQDDGNRSKETDADKIPSFLRSGSGE

TrEMBL top hitse value%identityAlignment
A0A2N9ERX7 CCHC-type domain-containing protein7.4e-1729.58Show/hide
Query:  MALEDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPW
        MA +DL E+W KF+LT + E   + V   A  V+       L+GKL++ + F+  VM +    +W    G  V  +G NLF+F  +++ E+ RVL+  PW
Subjt:  MALEDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPW

Query:  LFN-------KFSAGAFQAYSYGEGTSYGVQTEG----------KQKVLGSTGIEVRLDDPLGSCWSLIRYEKLPELCSFCGIIGHTTHNCNSFYMDSG-
        L++       +F             + + VQ  G          +++V G+ G+  R+D      W   +YE+LP +C  CGI+GH    C +       
Subjt:  LFN-------KFSAGAFQAYSYGEGTSYGVQTEG----------KQKVLGSTGIEVRLDDPLGSCWSLIRYEKLPELCSFCGIIGHTTHNCNSFYMDSG-

Query:  SPSQQHQYGMWLQ
          S   QYG WL+
Subjt:  SPSQQHQYGMWLQ

A0A2N9F7A6 Uncharacterized protein4.8e-1627.87Show/hide
Query:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYN-LIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLF
        E L E W KF+LT DE    V  D    +   KSLG N L+G+L++ + F+   ++ +   +W +  G+T++++G NLF+F   +E E+ RV+   PWLF
Subjt:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYN-LIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLF

Query:  N------------------KFSAGAFQAYSYGEGTSYGVQTEGKQKVLGSTG---------------------IEVRLDDP-----------LGSCWSLI
                           +F+   F    +G    +  +T G ++V G+ G                     I + +  P           LG  W   
Subjt:  N------------------KFSAGAFQAYSYGEGTSYGVQTEGKQKVLGSTG---------------------IEVRLDDP-----------LGSCWSLI

Query:  RYEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQ-QHQYGMWLQ
        +YE+LP LC  CG+IGHT  +C +         +   QYG WL+
Subjt:  RYEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQ-QHQYGMWLQ

A0A2N9GWE9 Uncharacterized protein3.7e-1629.63Show/hide
Query:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVW-NIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLF
        ++L E W KF+LT + E   V +   A EV+R    + L+GKL + + F+ E ++     +W  +  G+T   +G NLF+F    + E+ RV+   PWLF
Subjt:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVW-NIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLF

Query:  N------------------KFSAGAFQAYSYGEGTSYGVQTEGKQ--KVLG--------------STGIEVRL---------------DDPLGSCWSLIR
        +                  +FS   F    YG   SY  +  G+Q   V G               T + VR+                + LG  W   +
Subjt:  N------------------KFSAGAFQAYSYGEGTSYGVQTEGKQ--KVLG--------------STGIEVRL---------------DDPLGSCWSLIR

Query:  YEKLPELCSFCGIIGHTTHNCNS-FYMDSGSPSQQHQYGMWLQ
        YE+LP LC  CG+IGH   +C S    +S SP    QYG WL+
Subjt:  YEKLPELCSFCGIIGHTTHNCNS-FYMDSGSPSQQHQYGMWLQ

A0A6J1BSZ1 uncharacterized protein LOC1110054811.4e-2028.46Show/hide
Query:  MALEDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIP-TGLTVEKLGVNLFLFSLNSEEEQIRVLKQEP
        MA  +L E W+ F LT +E++  VD+D +A E T K L  +LI KLLS R  S  V++   K  W +     +V+ +G N+FLF+ N   ++ R+L+  P
Subjt:  MALEDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIP-TGLTVEKLGVNLFLFSLNSEEEQIRVLKQEP

Query:  WLFNKF---------------------------------------------SAGAFQ-----AYSYGEGTSYGVQTEGKQKVLGSTGIEVRLDDPLGSCW
        W F++                                              + G F+     A ++  G+   V+           GI++ LD P+G CW
Subjt:  WLFNKF---------------------------------------------SAGAFQ-----AYSYGEGTSYGVQTEGKQKVLGSTGIEVRLDDPLGSCW

Query:  SLIRYEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQQHQYGMWLQYIGHSTT
          I+YE+LP+    CG + H   +C+   +D  S S+  QYG WL++ GH  +
Subjt:  SLIRYEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQQHQYGMWLQYIGHSTT

A0A6J1DU55 uncharacterized protein LOC1110231356.4e-2931.3Show/hide
Query:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLFN
        E+L  +W+KF LT +E+E  +DVD  A ++  + L Y+L+GKLL+ R+ S +V+ +     W +   LTVE +G NLFLF    E +  RV+K  PW F+
Subjt:  EDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLFN

Query:  K------------------FSAGAF---------------QAYSYGEGTSYGVQTEGKQKVLG-----------------STGIEVRLDDPLGSCWSLIR
        K                  F+  AF                A   G      V  +  +K                      GI++ +D P+G CW  I+
Subjt:  K------------------FSAGAF---------------QAYSYGEGTSYGVQTEGKQKVLG-----------------STGIEVRLDDPLGSCWSLIR

Query:  YEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQ-QHQYGMWLQYIG
        YE+LP+ C FCG+IGH++H+C++ Y+ +   S+   +YG WL+++G
Subjt:  YEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQ-QHQYGMWLQYIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTAGAAGACTTGTTCGAAAATTGGGAGAAGTTCAATCTGACAGTTGATGAGGAAGAAACAGAGGTGGATGTTGATCCCACTGCTGCTGAGGTTACTAGAAAGTC
CCTGGGATACAACCTCATTGGCAAACTGTTATCTCCTAGGGTCTTCTCAGGCGAAGTTATGAGAAAGAATTTTAAATCAGTATGGAACATTCCTACAGGACTGACAGTCG
AAAAGTTAGGGGTTAATTTATTTTTATTTTCCCTCAATTCGGAAGAAGAGCAAATTAGAGTCTTGAAACAAGAACCATGGCTATTCAACAAGTTTTCTGCTGGTGCTTTC
CAAGCCTATTCCTATGGTGAAGGCACAAGCTATGGAGTTCAAACTGAAGGAAAGCAAAAGGTTTTGGGTTCAACTGGTATCGAAGTTAGGCTCGATGACCCCTTAGGAAG
CTGCTGGTCTCTTATACGCTACGAAAAATTGCCAGAGCTGTGCTCTTTTTGCGGCATCATAGGGCATACGACACACAACTGCAACTCCTTCTATATGGACAGTGGCTCAC
CTTCTCAACAACATCAATACGGTATGTGGCTTCAATATATAGGTCATTCAACTACTTTCTTTCGATCTCCAAGCACGAGTCCAATGGGGCAAAATAAGATCATGGTTGAT
ATCCAAGATGATGGTAATCGATCTAAGGAGACAGACGCAGATAAAATCCCATCTTTTCTTCGTTCGGGCAGTGGCGAAGTAGACCCTCAAACACACGATTCCGGCAACAA
ACCAATGGAGATCTCACCGGTGATCGAGGAAGCGGTTACTGTTCCAGTTCAGTCAACTCACCCGTCTGGTCAAGTAATTAATGGTTGCGTAACTTCAGATTTATCGCGGG
CAAAGAAGAAACTTGATTTCGCGGACGTTACGCTTTCTCCATTGATTAAGCCAGTTTCTATCGTTCAACCTCCAGGCGTTTTTCCGTCCATGGCACATGAGGAGCCCAAG
CCGATTTCCGTTTCACCTGAGGCTGCGTTTTACTCCCTGTCAGGTTTTCAATTTAAGGAAGAAGGGAAATATAGGCTTTCAAACTTGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTAGAAGACTTGTTCGAAAATTGGGAGAAGTTCAATCTGACAGTTGATGAGGAAGAAACAGAGGTGGATGTTGATCCCACTGCTGCTGAGGTTACTAGAAAGTC
CCTGGGATACAACCTCATTGGCAAACTGTTATCTCCTAGGGTCTTCTCAGGCGAAGTTATGAGAAAGAATTTTAAATCAGTATGGAACATTCCTACAGGACTGACAGTCG
AAAAGTTAGGGGTTAATTTATTTTTATTTTCCCTCAATTCGGAAGAAGAGCAAATTAGAGTCTTGAAACAAGAACCATGGCTATTCAACAAGTTTTCTGCTGGTGCTTTC
CAAGCCTATTCCTATGGTGAAGGCACAAGCTATGGAGTTCAAACTGAAGGAAAGCAAAAGGTTTTGGGTTCAACTGGTATCGAAGTTAGGCTCGATGACCCCTTAGGAAG
CTGCTGGTCTCTTATACGCTACGAAAAATTGCCAGAGCTGTGCTCTTTTTGCGGCATCATAGGGCATACGACACACAACTGCAACTCCTTCTATATGGACAGTGGCTCAC
CTTCTCAACAACATCAATACGGTATGTGGCTTCAATATATAGGTCATTCAACTACTTTCTTTCGATCTCCAAGCACGAGTCCAATGGGGCAAAATAAGATCATGGTTGAT
ATCCAAGATGATGGTAATCGATCTAAGGAGACAGACGCAGATAAAATCCCATCTTTTCTTCGTTCGGGCAGTGGCGAAGTAGACCCTCAAACACACGATTCCGGCAACAA
ACCAATGGAGATCTCACCGGTGATCGAGGAAGCGGTTACTGTTCCAGTTCAGTCAACTCACCCGTCTGGTCAAGTAATTAATGGTTGCGTAACTTCAGATTTATCGCGGG
CAAAGAAGAAACTTGATTTCGCGGACGTTACGCTTTCTCCATTGATTAAGCCAGTTTCTATCGTTCAACCTCCAGGCGTTTTTCCGTCCATGGCACATGAGGAGCCCAAG
CCGATTTCCGTTTCACCTGAGGCTGCGTTTTACTCCCTGTCAGGTTTTCAATTTAAGGAAGAAGGGAAATATAGGCTTTCAAACTTGATATGA
Protein sequenceShow/hide protein sequence
MALEDLFENWEKFNLTVDEEETEVDVDPTAAEVTRKSLGYNLIGKLLSPRVFSGEVMRKNFKSVWNIPTGLTVEKLGVNLFLFSLNSEEEQIRVLKQEPWLFNKFSAGAF
QAYSYGEGTSYGVQTEGKQKVLGSTGIEVRLDDPLGSCWSLIRYEKLPELCSFCGIIGHTTHNCNSFYMDSGSPSQQHQYGMWLQYIGHSTTFFRSPSTSPMGQNKIMVD
IQDDGNRSKETDADKIPSFLRSGSGEVDPQTHDSGNKPMEISPVIEEAVTVPVQSTHPSGQVINGCVTSDLSRAKKKLDFADVTLSPLIKPVSIVQPPGVFPSMAHEEPK
PISVSPEAAFYSLSGFQFKEEGKYRLSNLI