; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028048 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028048
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:11635857..11637018
RNA-Seq ExpressionLag0028048
SyntenyLag0028048
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB77427.1 hypothetical protein L484_000483 [Morus notabilis]8.1e-0523.03Show/hide
Query:  LKRDFLFERGFGDDVPRFLQTGIANLGWSQFCAKPE------------------------PVNSNIVENFTQILTIRKSFS--------DQLNAAVQEVG
        ++R F++ RG     P F+ + IA   W  FC  P                         P  S  + +   +  +   F+        DQL+  + E+ 
Subjt:  LKRDFLFERGFGDDVPRFLQTGIANLGWSQFCAKPE------------------------PVNSNIVENFTQILTIRKSFS--------DQLNAAVQEVG

Query:  IEGVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL
        +EG +WR +      F    L+  +  W  F+R RL+P++H   V ++R  L
Subjt:  IEGVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL

EXB89644.1 hypothetical protein L484_018745 [Morus notabilis]3.6e-0527.7Show/hide
Query:  RFFNNLARAKYQEMLK-RDFLFERGFG---DDVPRFLQTGIANLGWSQFCAKPEPVNSNIVENF-------TQILTIRKSFSDQLNAAVQEVGIEG-VQW
        RF +  A  +Y+   K R  + ERGF    + +P  +   I +  W +FC++P   +  +V  F       T   T ++   D+   A+ E   +G  +W
Subjt:  RFFNNLARAKYQEMLK-RDFLFERGFG---DDVPRFLQTGIANLGWSQFCAKPEPVNSNIVENF-------TQILTIRKSFSDQLNAAVQEVGIEG-VQW

Query:  RLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFLPL
         +    +  F+A YL +  N W+ F+  RL+P+TH S V+ +R  + L
Subjt:  RLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFLPL

EXB93492.1 hypothetical protein L484_006967 [Morus notabilis]3.6e-0523.46Show/hide
Query:  KEGKGKG---IVEALGEVDEVEEERLPFIRFFNNLARAKYQEM-------LKRDFLFERGFGDDVPRFLQTGIANLGWSQFCAKPEPVNSNI-VENFTQI
        K  KGKG   I+++     E   E     +F +  A  ++          ++R F++ RG     P F+ + IA   W  FC  P      + + +   +
Subjt:  KEGKGKG---IVEALGEVDEVEEERLPFIRFFNNLARAKYQEM-------LKRDFLFERGFGDDVPRFLQTGIANLGWSQFCAKPEPVNSNI-VENFTQI

Query:  LTIRKSFS--------DQLNAAVQEVGIEGVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL
          +   F+        DQL+  + E+ +EG +W  +      F    L+     W  F+R RL+P++H   V ++R  L
Subjt:  LTIRKSFS--------DQLNAAVQEVGIEGVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL

KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]6.8e-0424Show/hide
Query:  VEEERLPFIRFFNNLARAKYQEMLKRDFLFERGF-------GDDVPRFLQTGIANLGWSQFCAKPEPVNSNIVENFTQILTIRKSFSDQLNAAVQEVGIE
        V  E   F +F N  A+A++Q    R   FE  F       G   P  +   +  L W +F   P  VN+++      +    ++ S   +  ++++  E
Subjt:  VEEERLPFIRFFNNLARAKYQEMLKRDFLFERGF-------GDDVPRFLQTGIANLGWSQFCAKPEPVNSNIVENFTQILTIRKSFSDQLNAAVQEVGIE

Query:  GVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL
         ++W   +  +       L+  A  W  F++ +L+PT+H++TVS  R+ L
Subjt:  GVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL

KAE8705556.1 Detected protein of unknown function [Hibiscus syriacus]1.6e-0525.85Show/hide
Query:  RFFNNLARAKYQEMLKRDFLFERGFGDDVPRFLQTGIANLG-----------WSQFCAKPEPVNS--NIVENFTQILTIRKSFSDQLNAAVQEVGIEGVQ
        RF + +A  ++Q +  R   FE GF      F    +A+LG           W++F   P+ +N+  NI +N T     +++ ++  +  ++ + +  +Q
Subjt:  RFFNNLARAKYQEMLKRDFLFERGFGDDVPRFLQTGIANLG-----------WSQFCAKPEPVNS--NIVENFTQILTIRKSFSDQLNAAVQEVGIEGVQ

Query:  WRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL
        W   +M  R      L+  A  W  F++ +LLP +H++TVS  R+ L
Subjt:  WRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL

TrEMBL top hitse value%identityAlignment
A0A6A2Y697 Reverse transcriptase domain-containing protein3.3e-0424Show/hide
Query:  VEEERLPFIRFFNNLARAKYQEMLKRDFLFERGF-------GDDVPRFLQTGIANLGWSQFCAKPEPVNSNIVENFTQILTIRKSFSDQLNAAVQEVGIE
        V  E   F +F N  A+A++Q    R   FE  F       G   P  +   +  L W +F   P  VN+++      +    ++ S   +  ++++  E
Subjt:  VEEERLPFIRFFNNLARAKYQEMLKRDFLFERGF-------GDDVPRFLQTGIANLGWSQFCAKPEPVNSNIVENFTQILTIRKSFSDQLNAAVQEVGIE

Query:  GVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL
         ++W   +  +       L+  A  W  F++ +L+PT+H++TVS  R+ L
Subjt:  GVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL

A0A6A3AN19 Uncharacterized protein7.9e-0625.85Show/hide
Query:  RFFNNLARAKYQEMLKRDFLFERGFGDDVPRFLQTGIANLG-----------WSQFCAKPEPVNS--NIVENFTQILTIRKSFSDQLNAAVQEVGIEGVQ
        RF + +A  ++Q +  R   FE GF      F    +A+LG           W++F   P+ +N+  NI +N T     +++ ++  +  ++ + +  +Q
Subjt:  RFFNNLARAKYQEMLKRDFLFERGFGDDVPRFLQTGIANLG-----------WSQFCAKPEPVNS--NIVENFTQILTIRKSFSDQLNAAVQEVGIEGVQ

Query:  WRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL
        W   +M  R      L+  A  W  F++ +LLP +H++TVS  R+ L
Subjt:  WRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL

W9S7D3 Uncharacterized protein1.8e-0523.46Show/hide
Query:  KEGKGKG---IVEALGEVDEVEEERLPFIRFFNNLARAKYQEM-------LKRDFLFERGFGDDVPRFLQTGIANLGWSQFCAKPEPVNSNI-VENFTQI
        K  KGKG   I+++     E   E     +F +  A  ++          ++R F++ RG     P F+ + IA   W  FC  P      + + +   +
Subjt:  KEGKGKG---IVEALGEVDEVEEERLPFIRFFNNLARAKYQEM-------LKRDFLFERGFGDDVPRFLQTGIANLGWSQFCAKPEPVNSNI-VENFTQI

Query:  LTIRKSFS--------DQLNAAVQEVGIEGVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL
          +   F+        DQL+  + E+ +EG +W  +      F    L+     W  F+R RL+P++H   V ++R  L
Subjt:  LTIRKSFS--------DQLNAAVQEVGIEGVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGAGAGCAAACAGAGAGAGAGATAATGAGGAGGAAACAGTGCCAGAGGTACCGAAAGCGAAGACAAAGAAAAAGAGAACACCCGAAGAGAAGGAAGCCAA
GAGGCGAAGAAAACAACAGAAGGTTGAAGGTCAAGAAATTATCCAAGAGAAACCAGTGAATGTCCCAGATACGAAGGGAGTTCAAAATCTTGAAGAAGAACCGATAGCCC
CAGATACGGTTCAAGAAGAGAATGTTGAGAAGAATCAAGAAACAGAGTCTGTTGAAGTTCGAGACGGCCAGGTCGCGGTTGTGCCTGAAGAAGATAATGAACAGGAGCCG
GTGCAGGAGGCTCAGGTGGAGAAGGAAGGCAAGGGCAAAGGTATTGTTGAGGCATTGGGCGAGGTCGACGAGGTTGAGGAAGAAAGATTACCTTTTATTCGCTTCTTCAA
CAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTCCTGTTCGAACGAGGATTTGGCGATGATGTGCCACGGTTCTTGCAGACTGGAATAGCGAACCTTG
GCTGGAGCCAATTTTGTGCGAAACCAGAGCCTGTTAATTCTAACATTGTTGAGAATTTTACGCAAATCTTGACGATCAGGAAGAGTTTCAGCGACCAACTGAATGCGGCT
GTCCAAGAGGTTGGCATTGAAGGGGTCCAATGGAGGTTGTCGAAGATGGAGAAGCGCAAGTTTCAGGCTGTTTATTTGAAAAGCGAGGCCAACACTTGGATGGATTTCAT
TAGGCTACGCTTACTGCCGACAACTCACGACTCCACAGTATCTCGGGACCGAGTTTTCTTGCCTTTGCTATTCTTCGCTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGAGAGCAAACAGAGAGAGAGATAATGAGGAGGAAACAGTGCCAGAGGTACCGAAAGCGAAGACAAAGAAAAAGAGAACACCCGAAGAGAAGGAAGCCAA
GAGGCGAAGAAAACAACAGAAGGTTGAAGGTCAAGAAATTATCCAAGAGAAACCAGTGAATGTCCCAGATACGAAGGGAGTTCAAAATCTTGAAGAAGAACCGATAGCCC
CAGATACGGTTCAAGAAGAGAATGTTGAGAAGAATCAAGAAACAGAGTCTGTTGAAGTTCGAGACGGCCAGGTCGCGGTTGTGCCTGAAGAAGATAATGAACAGGAGCCG
GTGCAGGAGGCTCAGGTGGAGAAGGAAGGCAAGGGCAAAGGTATTGTTGAGGCATTGGGCGAGGTCGACGAGGTTGAGGAAGAAAGATTACCTTTTATTCGCTTCTTCAA
CAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTCCTGTTCGAACGAGGATTTGGCGATGATGTGCCACGGTTCTTGCAGACTGGAATAGCGAACCTTG
GCTGGAGCCAATTTTGTGCGAAACCAGAGCCTGTTAATTCTAACATTGTTGAGAATTTTACGCAAATCTTGACGATCAGGAAGAGTTTCAGCGACCAACTGAATGCGGCT
GTCCAAGAGGTTGGCATTGAAGGGGTCCAATGGAGGTTGTCGAAGATGGAGAAGCGCAAGTTTCAGGCTGTTTATTTGAAAAGCGAGGCCAACACTTGGATGGATTTCAT
TAGGCTACGCTTACTGCCGACAACTCACGACTCCACAGTATCTCGGGACCGAGTTTTCTTGCCTTTGCTATTCTTCGCTCGATGA
Protein sequenceShow/hide protein sequence
MAKTRANRERDNEEETVPEVPKAKTKKKRTPEEKEAKRRRKQQKVEGQEIIQEKPVNVPDTKGVQNLEEEPIAPDTVQEENVEKNQETESVEVRDGQVAVVPEEDNEQEP
VQEAQVEKEGKGKGIVEALGEVDEVEEERLPFIRFFNNLARAKYQEMLKRDFLFERGFGDDVPRFLQTGIANLGWSQFCAKPEPVNSNIVENFTQILTIRKSFSDQLNAA
VQEVGIEGVQWRLSKMEKRKFQAVYLKSEANTWMDFIRLRLLPTTHDSTVSRDRVFLPLLFFAR