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Lag0028065 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028065
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr8:12156402..12164269
RNA-Seq ExpressionLag0028065
SyntenyLag0028065
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]5.2e-3254.2Show/hide
Query:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW
        MVYF E   S  ++LVIL D++QP + GL+L+VE+P +G  +D WP L++ + LP LS E  LS+ +  W+LQSSIH +A N    LTLG+R+I+GQ RW
Subjt:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW

Query:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL
         +V KVPG+F FT  YWEWLELVVGRN + L
Subjt:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]2.6e-3152.67Show/hide
Query:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW
        MVYF E   S  ++LVIL D++QP + GL+L++E+P +G  +D WP L++ + LP LS E  LS+ +  W+LQSSIH +A N    LTLG+R+I+GQ RW
Subjt:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW

Query:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL
         ++ KVPG+F FT  YWEWLELVVGRN + L
Subjt:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL

KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.2e-3254.2Show/hide
Query:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW
        MVYF E   S  ++LVIL D++QP + GL+L+VE+P +G  +D WP L++ + LP LS E  LS+ +  W+LQSSIH +A N    LTLG+R+I+GQ RW
Subjt:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW

Query:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL
         +V KVPG+F FT  YWEWLELVVGRN + L
Subjt:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL

KAA0058006.1 uncharacterized protein E6C27_scaffold274G003110 [Cucumis melo var. makuwa]1.2e-3151.06Show/hide
Query:  RKLGVTLIRIMVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLG
        R+LG    R MVYF E   S  ++L+IL +K+QP + GL+L+VE+P +   +D WP L++ + LP LS E  LS+ +  W+LQSSIH +A N    LTLG
Subjt:  RKLGVTLIRIMVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLG

Query:  RRMIDGQARWNSVMKVPGDFSFTSLYWEWLELVVGRNEQKL
        +R+I+GQ RW ++ KVPG+F FT  YWEWLELVVGRN + L
Subjt:  RRMIDGQARWNSVMKVPGDFSFTSLYWEWLELVVGRNEQKL

TYK00336.1 hypothetical protein E5676_scaffold1923G00140 [Cucumis melo var. makuwa]3.4e-3153.44Show/hide
Query:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW
        MVYF E   S  ++LVIL D++QP + GL+L+VE+P +G   D WP L + + LP LS E  L + +  W+LQSSIH +A+N    LTLG+R+I+GQ RW
Subjt:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW

Query:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL
          V KVPG+F FT  YWEWLELVVGRN + L
Subjt:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL

TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein2.5e-3254.2Show/hide
Query:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW
        MVYF E   S  ++LVIL D++QP + GL+L+VE+P +G  +D WP L++ + LP LS E  LS+ +  W+LQSSIH +A N    LTLG+R+I+GQ RW
Subjt:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW

Query:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL
         +V KVPG+F FT  YWEWLELVVGRN + L
Subjt:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL

A0A5A7U8L3 PMD domain-containing protein1.2e-3152.67Show/hide
Query:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW
        MVYF E   S  ++LVIL D++QP + GL+L++E+P +G  +D WP L++ + LP LS E  LS+ +  W+LQSSIH +A N    LTLG+R+I+GQ RW
Subjt:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW

Query:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL
         ++ KVPG+F FT  YWEWLELVVGRN + L
Subjt:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL

A0A5A7UET3 Putative mitochondrial protein2.5e-3254.2Show/hide
Query:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW
        MVYF E   S  ++LVIL D++QP + GL+L+VE+P +G  +D WP L++ + LP LS E  LS+ +  W+LQSSIH +A N    LTLG+R+I+GQ RW
Subjt:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW

Query:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL
         +V KVPG+F FT  YWEWLELVVGRN + L
Subjt:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL

A0A5A7UV18 Uncharacterized protein5.6e-3251.06Show/hide
Query:  RKLGVTLIRIMVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLG
        R+LG    R MVYF E   S  ++L+IL +K+QP + GL+L+VE+P +   +D WP L++ + LP LS E  LS+ +  W+LQSSIH +A N    LTLG
Subjt:  RKLGVTLIRIMVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLG

Query:  RRMIDGQARWNSVMKVPGDFSFTSLYWEWLELVVGRNEQKL
        +R+I+GQ RW ++ KVPG+F FT  YWEWLELVVGRN + L
Subjt:  RRMIDGQARWNSVMKVPGDFSFTSLYWEWLELVVGRNEQKL

A0A5D3BQ12 PMD domain-containing protein1.6e-3153.44Show/hide
Query:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW
        MVYF E   S  ++LVIL D++QP + GL+L+VE+P +G   D WP L + + LP LS E  L + +  W+LQSSIH +A+N    LTLG+R+I+GQ RW
Subjt:  MVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPNLNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARW

Query:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL
          V KVPG+F FT  YWEWLELVVGRN + L
Subjt:  NSVMKVPGDFSFTSLYWEWLELVVGRNEQKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCAACAGGGTACCGTTAGGAAAAGACAACTGTTGGTGACTGACCTAAGAAACCCTATCCATTCCTGGAGTTTGCGGCATTCTGAATCCTATGATCAGGCCCTCCG
AAGGGATGGTCGCTTCCAGGGCGACGCGCAGGCGGATCATAGGAATCTCACTGTGCAACCTAGAGTTGGAGACCGTAGCTTTGATCTACAAAGTCTTCAAGAAACTTTAA
TCTTCGGAGTCTTGAAGGAAAATCTGGATTTTGGTCTTCAAAGTCTTGTGGGAGGATTGGAGCTTCAATCTTCAGGATCTTGCAGAGAGCTTCAATCTTCTAAATCTTCA
GAGTCTTGCAGCAGGATCTGGACTTCAATCTTCAAGATTCTTGCAGGAGGAATGGAGCTTCAATCTTCAAGTCTTGTAGAAGGAATGGAGCTTCAGTCTTCAAATCTTGT
AGGAGGATCAGAGCTTCAGTCTTCAGAGTCTTCTGAGAGCTTCAATCTTCTGCCGCCCCTTCCAAATGAGCCAAGGACTCCTATTTATAGAGTTCCCAACGCTTTAATGG
GCTTGGGCTTGAATTGGGCTTGGGCCCATCTATGGGCCTGGATGAGTTTTTTGGATTTCAGGCCCAATTATCTTAATAACATTGGGCCGCTGCTTGCGGAAACACGGCAC
GACGAGTCCCTCTGTGGCGGCGACGACGAGAGGGAGAAGAGCGACTTAGCTTCCAGCCTTGAAACTGAAACCAAGCGAAAGTTGGGGGTGACACTTATAAGGGCTTTGAT
CCTCAGTGTTCATCCTCAGCTAGCTTCCAGCCTTGAAACTGAAACCAAGCGAAAGTTGGGGGTGACACTTATAAGGATCATGGTATACTTCGCTGAGCATATCTCCTCCG
AGAAGAAATATCTTGTCATTCTCAAGGACAAAGATCAGCCTATTAAATACGGGCTTAATCTCCTGGTCGAGGAACCAAAGTCTGGCCCTCTTTCAGACCTATGGCCAAAT
TTAAATGATGTCGCCTTTTTACCCGAACTATCGACGGAAAAGGTTTTAAGCCAAGAAGAACGGGTGTGGCTTTTGCAATCCTCAATCCATCCTAAAGCTTACAACCGAGA
TCCAGAGTTGACTCTAGGACGTCGAATGATAGATGGCCAAGCCCGTTGGAATTCTGTGATGAAGGTTCCTGGAGACTTCTCCTTCACTTCACTTTATTGGGAATGGTTGG
AGTTGGTAGTTGGTCGCAATGAGCAAAAGCTTATGAGACTCGCTTATTTAATGCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACCAACAGGGTACCGTTAGGAAAAGACAACTGTTGGTGACTGACCTAAGAAACCCTATCCATTCCTGGAGTTTGCGGCATTCTGAATCCTATGATCAGGCCCTCCG
AAGGGATGGTCGCTTCCAGGGCGACGCGCAGGCGGATCATAGGAATCTCACTGTGCAACCTAGAGTTGGAGACCGTAGCTTTGATCTACAAAGTCTTCAAGAAACTTTAA
TCTTCGGAGTCTTGAAGGAAAATCTGGATTTTGGTCTTCAAAGTCTTGTGGGAGGATTGGAGCTTCAATCTTCAGGATCTTGCAGAGAGCTTCAATCTTCTAAATCTTCA
GAGTCTTGCAGCAGGATCTGGACTTCAATCTTCAAGATTCTTGCAGGAGGAATGGAGCTTCAATCTTCAAGTCTTGTAGAAGGAATGGAGCTTCAGTCTTCAAATCTTGT
AGGAGGATCAGAGCTTCAGTCTTCAGAGTCTTCTGAGAGCTTCAATCTTCTGCCGCCCCTTCCAAATGAGCCAAGGACTCCTATTTATAGAGTTCCCAACGCTTTAATGG
GCTTGGGCTTGAATTGGGCTTGGGCCCATCTATGGGCCTGGATGAGTTTTTTGGATTTCAGGCCCAATTATCTTAATAACATTGGGCCGCTGCTTGCGGAAACACGGCAC
GACGAGTCCCTCTGTGGCGGCGACGACGAGAGGGAGAAGAGCGACTTAGCTTCCAGCCTTGAAACTGAAACCAAGCGAAAGTTGGGGGTGACACTTATAAGGGCTTTGAT
CCTCAGTGTTCATCCTCAGCTAGCTTCCAGCCTTGAAACTGAAACCAAGCGAAAGTTGGGGGTGACACTTATAAGGATCATGGTATACTTCGCTGAGCATATCTCCTCCG
AGAAGAAATATCTTGTCATTCTCAAGGACAAAGATCAGCCTATTAAATACGGGCTTAATCTCCTGGTCGAGGAACCAAAGTCTGGCCCTCTTTCAGACCTATGGCCAAAT
TTAAATGATGTCGCCTTTTTACCCGAACTATCGACGGAAAAGGTTTTAAGCCAAGAAGAACGGGTGTGGCTTTTGCAATCCTCAATCCATCCTAAAGCTTACAACCGAGA
TCCAGAGTTGACTCTAGGACGTCGAATGATAGATGGCCAAGCCCGTTGGAATTCTGTGATGAAGGTTCCTGGAGACTTCTCCTTCACTTCACTTTATTGGGAATGGTTGG
AGTTGGTAGTTGGTCGCAATGAGCAAAAGCTTATGAGACTCGCTTATTTAATGCGGTGA
Protein sequenceShow/hide protein sequence
MHQQGTVRKRQLLVTDLRNPIHSWSLRHSESYDQALRRDGRFQGDAQADHRNLTVQPRVGDRSFDLQSLQETLIFGVLKENLDFGLQSLVGGLELQSSGSCRELQSSKSS
ESCSRIWTSIFKILAGGMELQSSSLVEGMELQSSNLVGGSELQSSESSESFNLLPPLPNEPRTPIYRVPNALMGLGLNWAWAHLWAWMSFLDFRPNYLNNIGPLLAETRH
DESLCGGDDEREKSDLASSLETETKRKLGVTLIRALILSVHPQLASSLETETKRKLGVTLIRIMVYFAEHISSEKKYLVILKDKDQPIKYGLNLLVEEPKSGPLSDLWPN
LNDVAFLPELSTEKVLSQEERVWLLQSSIHPKAYNRDPELTLGRRMIDGQARWNSVMKVPGDFSFTSLYWEWLELVVGRNEQKLMRLAYLMR