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Lag0028067 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028067
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr8:12303907..12305432
RNA-Seq ExpressionLag0028067
SyntenyLag0028067
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8712804.1 hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus]2.4e-0831.82Show/hide
Query:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAVE--AFKNREKDVSVSLSEEGSKYMDGVYQQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII
        ++E  +NI E     ++V G+ + ++P+AIN    ++    + R + V         K  +   + +LLPT+H++TVS +R++L  +I+  L+ID+GKII
Subjt:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAVE--AFKNREKDVSVSLSEEGSKYMDGVYQQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII

Query:  ASEISGCWKKKVGKLFFPNTITMLCKQAGVLE
          +   C K+    L FPN IT L ++  V E
Subjt:  ASEISGCWKKKVGKLFFPNTITMLCKQAGVLE

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.2e-1034.59Show/hide
Query:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL
        +RE  AN+ +     V VRGV+V WS  AINA+  +        E  +N  +   +++ E       E +    G Y                  +  LL
Subjt:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL

Query:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA
        PTTH  TVS++R+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A
Subjt:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.6e-1235.85Show/hide
Query:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL
        +RE  AN+ + E   V VRGV+V WS  AINA+  +        E  +N  +   +++ E       E +    G Y                  + RLL
Subjt:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL

Query:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA
        PTTH  TVS++R+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A
Subjt:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]2.2e-0931.17Show/hide
Query:  EAFKNREKDVSVSLSEEGSKYMDGVYQQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA-GVLEMKEMS
        E  +NR  +         +K      + RLLPTTH  TVS++R+LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A     + E  
Subjt:  EAFKNREKDVSVSLSEEGSKYMDGVYQQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA-GVLEMKEMS

Query:  YYLTRE----SSIRLTWHGFSVCKRHITVDLSMASTRFRTTCTVGQQARVAERQ
         ++T E    +  R+T  G +   +  +      ++  R    + QQ +  E++
Subjt:  YYLTRE----SSIRLTWHGFSVCKRHITVDLSMASTRFRTTCTVGQQARVAERQ

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.1e-1330.42Show/hide
Query:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL
        +RE  AN+ + E   + VRGV+V WS  AINA+  +        E  +N  +   +++ E       E +    G Y                  + RLL
Subjt:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL

Query:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQAGVLEMKEMSYYLTRESSI---RLTWHGFSVCKRHITVDLSM
        PTTH   VS++R+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  L  +E  +      +I   R+T  G +   +  +     
Subjt:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQAGVLEMKEMSYYLTRESSI---RLTWHGFSVCKRHITVDLSM

Query:  ASTRFRTTCTVGQQARVAE----------RQALTFWNYVK
        A++  RT   V QQ +  E          +Q   FW Y K
Subjt:  ASTRFRTTCTVGQQARVAE----------RQALTFWNYVK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)5.7e-1134.59Show/hide
Query:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL
        +RE  AN+ +     V VRGV+V WS  AINA+  +        E  +N  +   +++ E       E +    G Y                  +  LL
Subjt:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL

Query:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA
        PTTH  TVS++R+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A
Subjt:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA

A0A2P5BCG4 Uncharacterized protein (Fragment)1.8e-1235.85Show/hide
Query:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL
        +RE  AN+ + E   V VRGV+V WS  AINA+  +        E  +N  +   +++ E       E +    G Y                  + RLL
Subjt:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL

Query:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA
        PTTH  TVS++R+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A
Subjt:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA

A0A2P5CEY2 Uncharacterized protein1.1e-0931.17Show/hide
Query:  EAFKNREKDVSVSLSEEGSKYMDGVYQQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA-GVLEMKEMS
        E  +NR  +         +K      + RLLPTTH  TVS++R+LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A     + E  
Subjt:  EAFKNREKDVSVSLSEEGSKYMDGVYQQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQA-GVLEMKEMS

Query:  YYLTRE----SSIRLTWHGFSVCKRHITVDLSMASTRFRTTCTVGQQARVAERQ
         ++T E    +  R+T  G +   +  +      ++  R    + QQ +  E++
Subjt:  YYLTRE----SSIRLTWHGFSVCKRHITVDLSMASTRFRTTCTVGQQARVAERQ

A0A2P5DXM3 Uncharacterized protein5.5e-1430.42Show/hide
Query:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL
        +RE  AN+ + E   + VRGV+V WS  AINA+  +        E  +N  +   +++ E       E +    G Y                  + RLL
Subjt:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAV--------EAFKNREKDVSVSLSE-------EGSKYMDGVY------------------QQRLL

Query:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQAGVLEMKEMSYYLTRESSI---RLTWHGFSVCKRHITVDLSM
        PTTH   VS++R+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  L  +E  +      +I   R+T  G +   +  +     
Subjt:  PTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQAGVLEMKEMSYYLTRESSI---RLTWHGFSVCKRHITVDLSM

Query:  ASTRFRTTCTVGQQARVAE----------RQALTFWNYVK
        A++  RT   V QQ +  E          +Q   FW Y K
Subjt:  ASTRFRTTCTVGQQARVAE----------RQALTFWNYVK

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein1.2e-0831.82Show/hide
Query:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAVE--AFKNREKDVSVSLSEEGSKYMDGVYQQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII
        ++E  +NI E     ++V G+ + ++P+AIN    ++    + R + V         K  +   + +LLPT+H++TVS +R++L  +I+  L+ID+GKII
Subjt:  LREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAVE--AFKNREKDVSVSLSEEGSKYMDGVYQQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII

Query:  ASEISGCWKKKVGKLFFPNTITMLCKQAGVLE
          +   C K+    L FPN IT L ++  V E
Subjt:  ASEISGCWKKKVGKLFFPNTITMLCKQAGVLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAAACGAGAGCAAGAAAAGAGAGGGATAATGAGGAAGAAGAGGTACATGTTACCCCCGAGACTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCACCTGAAGA
AGGTAATGAGCCAATGCAGGAGGCTCGAGTAGAGGTGATCATGCCGGAAGTACCCAAACGTCGCCGCATTAAGCGAAAAGCGGGTCGCGTCAAGGTAATCCGCACTGATA
CTCCTCGCCTCCAACCATTGATTCTAAAAGAGAAAATGCAGAGAGAGAGGAACAAGAGAAAAAGAGTCGAGGCAAACAAAGGAGGAAGCAGAGAAAAAGGCGGAAGAAGA
AAGTTGCTCAAGCGAAGAGCAAAAAGGGCAAGAGTGTTGCTGCAACATCGAAGGAACCTGACGAACCAGAAGAGCCACAGTTACCTGCGGGAAGTTTGTGCAAATATTGA
CGAGGAGGAAGGTTTCCAAGTTATCGTTCGAGGTGTCGAAGTCGACTGGAGTCCTAGTGCTATCAACGCCCTGGGCGCAGTGGAGGCTTTCAAAAACCGAGAAAAGGACG
TTTCAGTCAGCCTATCTGAAGAGGGAAGCAAATACATGGATGGGGTTTATCAGCAGAGATTGCTTCCAACGACTCACGACTCGACGGTTTCTAGGGAACGGGTTCTGTTG
GCTTTCGCGATTTTAAGGTCTCTCAGTATTGATGTAGGGAAGATCATTGCTAGTGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGTTGTTTTTCCCGAATACAAT
CACAATGCTTTGCAAGCAAGCAGGGGTTCTGGAGATGAAGGAGATGTCATATTATTTGACAAGGGAATCATCGATACGCCTAACTTGGCACGGCTTCAGCGTATGCAAGA
GGCACATCACAGTGGACTTGTCTATGGCATCAACACGTTTTAGAACAACTTGCACTGTCGGCCAGCAGGCAAGAGTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTAT
GTTAAAATCGTGATGCCAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAAACGAGAGCAAGAAAAGAGAGGGATAATGAGGAAGAAGAGGTACATGTTACCCCCGAGACTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCACCTGAAGA
AGGTAATGAGCCAATGCAGGAGGCTCGAGTAGAGGTGATCATGCCGGAAGTACCCAAACGTCGCCGCATTAAGCGAAAAGCGGGTCGCGTCAAGGTAATCCGCACTGATA
CTCCTCGCCTCCAACCATTGATTCTAAAAGAGAAAATGCAGAGAGAGAGGAACAAGAGAAAAAGAGTCGAGGCAAACAAAGGAGGAAGCAGAGAAAAAGGCGGAAGAAGA
AAGTTGCTCAAGCGAAGAGCAAAAAGGGCAAGAGTGTTGCTGCAACATCGAAGGAACCTGACGAACCAGAAGAGCCACAGTTACCTGCGGGAAGTTTGTGCAAATATTGA
CGAGGAGGAAGGTTTCCAAGTTATCGTTCGAGGTGTCGAAGTCGACTGGAGTCCTAGTGCTATCAACGCCCTGGGCGCAGTGGAGGCTTTCAAAAACCGAGAAAAGGACG
TTTCAGTCAGCCTATCTGAAGAGGGAAGCAAATACATGGATGGGGTTTATCAGCAGAGATTGCTTCCAACGACTCACGACTCGACGGTTTCTAGGGAACGGGTTCTGTTG
GCTTTCGCGATTTTAAGGTCTCTCAGTATTGATGTAGGGAAGATCATTGCTAGTGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGTTGTTTTTCCCGAATACAAT
CACAATGCTTTGCAAGCAAGCAGGGGTTCTGGAGATGAAGGAGATGTCATATTATTTGACAAGGGAATCATCGATACGCCTAACTTGGCACGGCTTCAGCGTATGCAAGA
GGCACATCACAGTGGACTTGTCTATGGCATCAACACGTTTTAGAACAACTTGCACTGTCGGCCAGCAGGCAAGAGTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTAT
GTTAAAATCGTGATGCCAATCTGA
Protein sequenceShow/hide protein sequence
MVKTRARKERDNEEEEVHVTPETEDVQEEQAEVAPEEGNEPMQEARVEVIMPEVPKRRRIKRKAGRVKVIRTDTPRLQPLILKEKMQRERNKRKRVEANKGGSREKGGRR
KLLKRRAKRARVLLQHRRNLTNQKSHSYLREVCANIDEEEGFQVIVRGVEVDWSPSAINALGAVEAFKNREKDVSVSLSEEGSKYMDGVYQQRLLPTTHDSTVSRERVLL
AFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKQAGVLEMKEMSYYLTRESSIRLTWHGFSVCKRHITVDLSMASTRFRTTCTVGQQARVAERQALTFWNY
VKIVMPI