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Lag0028082 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028082
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:12542944..12543441
RNA-Seq ExpressionLag0028082
SyntenyLag0028082
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU21788.1 hypothetical protein TSUD_329120, partial [Trifolium subterraneum]2.6e-1933.72Show/hide
Query:  WKNEGRVTIKKAGENLLECQFNNLKALDL-----RW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFEREE
        W++   + I+   +NL   +F   +  DL      W     LL+   I G E+ S +     S  +   DLP    +    + LGNTVGTFE +D +   
Subjt:  WKNEGRVTIKKAGENLLECQFNNLKALDL-----RW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFEREE

Query:  --GNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSDKPQY
          G  LR+RV +D++KPL+RG+  ++  +GKE W++ ++E LPN+C+  GR+GH   +C+D E  + D+ QY
Subjt:  --GNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSDKPQY

MCH80348.1 hypothetical protein [Trifolium medium]1.4e-2034.3Show/hide
Query:  WKNEGRVTIKKAGENLLECQFNNLKALDLRW---------GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R
        W++   + I+   +NL   +F   +  DL +          LL+   I G E+ S +   + S  +   DLP    +    + LGNTVGTFE +DF+   
Subjt:  WKNEGRVTIKKAGENLLECQFNNLKALDLRW---------GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R

Query:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSDKPQY
          G  LR+RV +D++KPL+RGT  ++  +GKE W++ ++E LPN+C+  GR+GH   +C+D E  + D+ QY
Subjt:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSDKPQY

MCH84017.1 zinc CCHC-type-like protein [Trifolium medium]2.4e-1731.55Show/hide
Query:  WKNEGRVTIKKAGENLLECQFNNLKALDL-----RW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R
        W+    V I+   +NL   +F   K  +L      W     LL+   I G E+ S ++    S  +   DLP    +    + LGN +G FE +D +   
Subjt:  WKNEGRVTIKKAGENLLECQFNNLKALDL-----RW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R

Query:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSD
          G  LRIRV +D++KPL+RG+  ++  +GK+ W++ ++E LPN+C+  GR+GH   +C++ E  ++D
Subjt:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSD

PNX92709.1 cysteine desulfurase mitochondrial-like [Trifolium pratense]1.7e-1831.55Show/hide
Query:  WKNEGRVTIKKAGENLLECQFNNLKALDLRW---------GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R
        W+    V I+   +NL   +F   K  +L W          LL+   I G E+ S ++    S  +   DLP    +    + LGN +GTFE +D +   
Subjt:  WKNEGRVTIKKAGENLLECQFNNLKALDLRW---------GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R

Query:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSD
          G  LRIRV +D++KPL+RG+  ++  +GK+ W++ ++E LPN+C+  GR+GH   +C++ +  ++D
Subjt:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSD

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.1e-1734.76Show/hide
Query:  MIWKNEGRVTIKKAGENLL------ECQFNNLKALDLRW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE
        + WK E ++T++  G+NL       EC  N +      W     L++ ++    +  S ++F   +  IH  DLP   LN+     LGN +G F  VD  
Subjt:  MIWKNEGRVTIKKAGENLL------ECQFNNLKALDLRW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE

Query:  REE---GNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECD
         +    G SLRIRV ID+ KPLRRG  I I       WI +++E LP++CY  G +GH + +CD
Subjt:  REE---GNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECD

TrEMBL top hitse value%identityAlignment
A0A2K3MPT1 Cysteine desulfurase mitochondrial-like8.1e-1931.55Show/hide
Query:  WKNEGRVTIKKAGENLLECQFNNLKALDLRW---------GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R
        W+    V I+   +NL   +F   K  +L W          LL+   I G E+ S ++    S  +   DLP    +    + LGN +GTFE +D +   
Subjt:  WKNEGRVTIKKAGENLLECQFNNLKALDLRW---------GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R

Query:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSD
          G  LRIRV +D++KPL+RG+  ++  +GK+ W++ ++E LPN+C+  GR+GH   +C++ +  ++D
Subjt:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSD

A0A2Z6LV25 Uncharacterized protein (Fragment)1.2e-1933.72Show/hide
Query:  WKNEGRVTIKKAGENLLECQFNNLKALDL-----RW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFEREE
        W++   + I+   +NL   +F   +  DL      W     LL+   I G E+ S +     S  +   DLP    +    + LGNTVGTFE +D +   
Subjt:  WKNEGRVTIKKAGENLLECQFNNLKALDL-----RW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFEREE

Query:  --GNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSDKPQY
          G  LR+RV +D++KPL+RG+  ++  +GKE W++ ++E LPN+C+  GR+GH   +C+D E  + D+ QY
Subjt:  --GNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSDKPQY

A0A392M033 CCHC-type domain-containing protein (Fragment)6.6e-2134.3Show/hide
Query:  WKNEGRVTIKKAGENLLECQFNNLKALDLRW---------GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R
        W++   + I+   +NL   +F   +  DL +          LL+   I G E+ S +   + S  +   DLP    +    + LGNTVGTFE +DF+   
Subjt:  WKNEGRVTIKKAGENLLECQFNNLKALDLRW---------GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R

Query:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSDKPQY
          G  LR+RV +D++KPL+RGT  ++  +GKE W++ ++E LPN+C+  GR+GH   +C+D E  + D+ QY
Subjt:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSDKPQY

A0A392M948 Zinc CCHC-type-like protein (Fragment)1.2e-1731.55Show/hide
Query:  WKNEGRVTIKKAGENLLECQFNNLKALDL-----RW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R
        W+    V I+   +NL   +F   K  +L      W     LL+   I G E+ S ++    S  +   DLP    +    + LGN +G FE +D +   
Subjt:  WKNEGRVTIKKAGENLLECQFNNLKALDL-----RW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE--R

Query:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSD
          G  LRIRV +D++KPL+RG+  ++  +GK+ W++ ++E LPN+C+  GR+GH   +C++ E  ++D
Subjt:  EEGNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSD

A0A6J1DU55 uncharacterized protein LOC1110231352.0e-1734.76Show/hide
Query:  MIWKNEGRVTIKKAGENLL------ECQFNNLKALDLRW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE
        + WK E ++T++  G+NL       EC  N +      W     L++ ++    +  S ++F   +  IH  DLP   LN+     LGN +G F  VD  
Subjt:  MIWKNEGRVTIKKAGENLL------ECQFNNLKALDLRW----GLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFE

Query:  REE---GNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECD
         +    G SLRIRV ID+ KPLRRG  I I       WI +++E LP++CY  G +GH + +CD
Subjt:  REE---GNSLRIRVKIDVQKPLRRGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATGGAAAAATGAAGGAAGAGTGACTATTAAAAAGGCAGGAGAAAACCTACTTGAATGTCAATTCAACAACTTAAAGGCCTTGGATCTGCGATGGGGCCTTTTGCT
GTTTGAGGAAATAAAAGGAGGTGAAAGATATTCAAGAATGAAGTTCAGATATGCTTCCCTTCGGATCCATTTTCTGGATTTGCCAAGAGTGTGTTTAAACAGAAAATGGG
TCGAGGCTTTGGGCAACACAGTAGGAACCTTTGAACGGGTTGATTTTGAAAGGGAGGAAGGAAACTCTCTAAGAATCAGAGTCAAGATAGATGTTCAAAAACCGTTGAGA
AGGGGCACCATGATCAGAATAGGCTCGAGGGGAAAGGAAGAATGGATTGAAATGAGGTTTGAGAACCTACCAAATTATTGCTATGAGTATGGAAGATTAGGACATCTAGC
TACAGAATGCGATGACTCGGAATCGCTTAACAGTGACAAGCCTCAATATGGAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGATATGGAAAAATGAAGGAAGAGTGACTATTAAAAAGGCAGGAGAAAACCTACTTGAATGTCAATTCAACAACTTAAAGGCCTTGGATCTGCGATGGGGCCTTTTGCT
GTTTGAGGAAATAAAAGGAGGTGAAAGATATTCAAGAATGAAGTTCAGATATGCTTCCCTTCGGATCCATTTTCTGGATTTGCCAAGAGTGTGTTTAAACAGAAAATGGG
TCGAGGCTTTGGGCAACACAGTAGGAACCTTTGAACGGGTTGATTTTGAAAGGGAGGAAGGAAACTCTCTAAGAATCAGAGTCAAGATAGATGTTCAAAAACCGTTGAGA
AGGGGCACCATGATCAGAATAGGCTCGAGGGGAAAGGAAGAATGGATTGAAATGAGGTTTGAGAACCTACCAAATTATTGCTATGAGTATGGAAGATTAGGACATCTAGC
TACAGAATGCGATGACTCGGAATCGCTTAACAGTGACAAGCCTCAATATGGAATATGA
Protein sequenceShow/hide protein sequence
MIWKNEGRVTIKKAGENLLECQFNNLKALDLRWGLLLFEEIKGGERYSRMKFRYASLRIHFLDLPRVCLNRKWVEALGNTVGTFERVDFEREEGNSLRIRVKIDVQKPLR
RGTMIRIGSRGKEEWIEMRFENLPNYCYEYGRLGHLATECDDSESLNSDKPQYGI