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Lag0028084 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028084
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60s ribosomal protein l37a
Genome locationchr8:12570433..12571197
RNA-Seq ExpressionLag0028084
SyntenyLag0028084
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8038424.1 hypothetical protein FH972_010935 [Carpinus fangiana]7.4e-0464.71Show/hide
Query:  IARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        + +F+L R  V     +DYGKVKA GA YTLN ASVVTV STIRR REQTE
Subjt:  IARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
KAE8076531.1 hypothetical protein FH972_015174 [Carpinus fangiana]9.6e-0463.46Show/hide
Query:  FIARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        F  +F + R  V     +D GKVKAGGA YTLNIAS VTV STIRR REQTE
Subjt:  FIARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
TrEMBL top hitse value%identityAlignment
A0A1J6K6B9 60s ribosomal protein l37a6.1e-0482.86Show/hide
Query:  RDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        +DYGKVKAGGA YTLN AS VTV STIRR REQTE
Subjt:  RDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
A0A5N6RFJ4 Uncharacterized protein4.7e-0463.46Show/hide
Query:  FIARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        F  +F + R  V     +D GKVKAGGA YTLNIAS VTV STIRR REQTE
Subjt:  FIARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
A0A660KRJ7 Uncharacterized protein3.6e-0464.71Show/hide
Query:  IARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        + +F+L R  V     +DYGKVKA GA YTLN ASVVTV STIRR REQTE
Subjt:  IARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-18.2e-0659.62Show/hide
Query:  FIARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        F  +F + R  V     +D GKVKAGGA YT+N AS VTV STIRR REQTE
Subjt:  FIARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
P0DKK2 60S ribosomal protein L37a-28.2e-0659.62Show/hide
Query:  FIARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        F  +F + R  V     +D GKVKAGGA YT+N AS VTV STIRR REQTE
Subjt:  FIARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
Q9SRK6 Putative 60S ribosomal protein L37a-13.1e-0577.14Show/hide
Query:  RDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        +D GKVKAGGA YT+N AS VTV STIRR REQTE
Subjt:  RDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
Q9XHE4 60S ribosomal protein L37a1.2e-0484.38Show/hide
Query:  GKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        GKVKAGGA YTLN AS VTV STIRR REQTE
Subjt:  GKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
Q9ZRS8 60S ribosomal protein L37a1.8e-0559.62Show/hide
Query:  FIARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        F  +F + R  V     +D GKVKAGGA YTLN  S VTV STIRR REQTE
Subjt:  FIARFRLLRYGV----ARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein2.2e-0677.14Show/hide
Query:  RDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        +D GKVKAGGA YT+N AS VTV STIRR REQTE
Subjt:  RDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
AT3G60245.1 Zinc-binding ribosomal protein family protein1.1e-0561.22Show/hide
Query:  RYGVAR---------DYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE
        +YGV R         D GKVKAGGA YT+N AS VTV STIRR REQ E
Subjt:  RYGVAR---------DYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTAATAGTTTCAGAGACGCTCGTGCGCCTCCCTCCTCCTTGCTGCCGTGAACACCAACCAGACGCCTCCATCTTTCCCTTCCTCTCCGACCGCAGCAACACGCC
ACGACGCCGGCGCCAACCTCCTCCGGTGACGGGCGATACCCACGTCGGCGACAGCGGCTTCATTGCTCGGTTTAGGCTGTTGAGATATGGAGTTGCTAGAGACTATGGAA
AGGTGAAAGCCGGAGGTGCTTACTACACATTGAACATAGCAAGTGTTGTGACCGTTACGAGCACAATCCGAAGGTCGAGGGAACAGACTGAGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTAATAGTTTCAGAGACGCTCGTGCGCCTCCCTCCTCCTTGCTGCCGTGAACACCAACCAGACGCCTCCATCTTTCCCTTCCTCTCCGACCGCAGCAACACGCC
ACGACGCCGGCGCCAACCTCCTCCGGTGACGGGCGATACCCACGTCGGCGACAGCGGCTTCATTGCTCGGTTTAGGCTGTTGAGATATGGAGTTGCTAGAGACTATGGAA
AGGTGAAAGCCGGAGGTGCTTACTACACATTGAACATAGCAAGTGTTGTGACCGTTACGAGCACAATCCGAAGGTCGAGGGAACAGACTGAGAGATAA
Protein sequenceShow/hide protein sequence
MSLIVSETLVRLPPPCCREHQPDASIFPFLSDRSNTPRRRRQPPPVTGDTHVGDSGFIARFRLLRYGVARDYGKVKAGGAYYTLNIASVVTVTSTIRRSREQTER