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Lag0028101 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028101
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr8:13055172..13055480
RNA-Seq ExpressionLag0028101
SyntenyLag0028101
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039557.1 uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa]9.0e-1552.63Show/hide
Query:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS
        QKKL +EG+VIP+SR GLGYKSP+P+RITRKGK KVVDS HI V+E+D  +E    S+  SA  FDRI   V  +  F+RL     E +     S
Subjt:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS

KAA0054152.1 uncharacterized protein E6C27_scaffold131G00760 [Cucumis melo var. makuwa]3.1e-1556.32Show/hide
Query:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVE
        QKKL +EG+ IP+SR GLGYKSP+P+RITRKGK KVVDS HI V+E+D  +E+   S+  SA  FDRI   V  +  F+RL  I  E
Subjt:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVE

KAA0055957.1 uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]4.0e-1558.02Show/hide
Query:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRL
        QKKL +EG+VIP+SR GLGYKSP+P+RITRKGK KVVD+ HI V+E+D  +E  K  +N    TFDRI   V  +  F+RL
Subjt:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRL

KAA0062018.1 uncharacterized protein E6C27_scaffold89G003490 [Cucumis melo var. makuwa]1.5e-1450.53Show/hide
Query:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS
        QKKL +EG+ IP+SR GLGYK P+P+RITRKGK K+VDS HI+V+E+D  +E+   S+  SA  FDRI   V  +  F+RL  I  E +     S
Subjt:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS

TYK28162.1 uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]8.1e-1652.63Show/hide
Query:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS
        QKKL +EG+VIP+SR GLGYKSP+P+RITRKGK KVVDS HI V+E+D  +E  K  +N    TFDRI   V  +  F+RL     E +     S
Subjt:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS

TrEMBL top hitse value%identityAlignment
A0A5A7UEC9 Uncharacterized protein1.5e-1556.32Show/hide
Query:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVE
        QKKL +EG+ IP+SR GLGYKSP+P+RITRKGK KVVDS HI V+E+D  +E+   S+  SA  FDRI   V  +  F+RL  I  E
Subjt:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVE

A0A5A7UMY2 Reverse transcriptase domain-containing protein2.0e-1558.02Show/hide
Query:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRL
        QKKL +EG+VIP+SR GLGYKSP+P+RITRKGK KVVD+ HI V+E+D  +E  K  +N    TFDRI   V  +  F+RL
Subjt:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRL

A0A5A7V356 Uncharacterized protein7.4e-1550.53Show/hide
Query:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS
        QKKL +EG+ IP+SR GLGYK P+P+RITRKGK K+VDS HI+V+E+D  +E+   S+  SA  FDRI   V  +  F+RL  I  E +     S
Subjt:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS

A0A5D3BSG5 Uncharacterized protein4.4e-1552.63Show/hide
Query:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS
        QKKL +EG+VIP+SR GLGYKSP+P+RITRKGK KVVDS HI V+E+D  +E    S+  SA  FDRI   V  +  F+RL     E +     S
Subjt:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS

A0A5D3DXC7 Reverse transcriptase domain-containing protein3.9e-1652.63Show/hide
Query:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS
        QKKL +EG+VIP+SR GLGYKSP+P+RITRKGK KVVDS HI V+E+D  +E  K  +N    TFDRI   V  +  F+RL     E +     S
Subjt:  QKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAGAAACTTAAAAAAGAAGGTTATGTTATACCCATCTCAAGGGTTGGACTTGGATATAAGTCTCCTGATCCAGTTCGAATCACAAGAAAAGGGAAAACAAAAGT
TGTAGATTCGCTTCACATTATGGTGGAAGAAATTGATGATCCCGACGAAGAAGGTAAAGGAAGTGAAAATCACTCGGCTTTTACTTTCGATCGAATTGAGTCATCTGTTA
CACATTCTTCGGGTTTTCAAAGGTTGTGTACAATTGCAGTAGAGGGTGAAAGTCAGCATCCAGCTTCTGGCTCCATGTTGCAATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAGAAACTTAAAAAAGAAGGTTATGTTATACCCATCTCAAGGGTTGGACTTGGATATAAGTCTCCTGATCCAGTTCGAATCACAAGAAAAGGGAAAACAAAAGT
TGTAGATTCGCTTCACATTATGGTGGAAGAAATTGATGATCCCGACGAAGAAGGTAAAGGAAGTGAAAATCACTCGGCTTTTACTTTCGATCGAATTGAGTCATCTGTTA
CACATTCTTCGGGTTTTCAAAGGTTGTGTACAATTGCAGTAGAGGGTGAAAGTCAGCATCCAGCTTCTGGCTCCATGTTGCAATTCTAA
Protein sequenceShow/hide protein sequence
MQKKLKKEGYVIPISRVGLGYKSPDPVRITRKGKTKVVDSLHIMVEEIDDPDEEGKGSENHSAFTFDRIESSVTHSSGFQRLCTIAVEGESQHPASGSMLQF