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Lag0028103 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028103
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:13083525..13084034
RNA-Seq ExpressionLag0028103
SyntenyLag0028103
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER48294.1 zinc ion binding [Striga asiatica]1.7e-0528.8Show/hide
Query:  DLAKHLAELKVTPAEKSSVFQLPESEIDRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTI-IDNVGANMFRCKFKNARIKGRILDMGPWFM--
        D+A+ + E+K     +     +    I+R   +++  +L K+++SK I+  +FK  MP I N    + I++VG N+F  +F++ + + R L  GPW +  
Subjt:  DLAKHLAELKVTPAEKSSVFQLPESEIDRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTI-IDNVGANMFRCKFKNARIKGRILDMGPWFM--

Query:  -IVLYYFSR---NPKET--PAVRIW
         +VL+   R   NP+E    ++ IW
Subjt:  -IVLYYFSR---NPKET--PAVRIW

TXG72444.1 hypothetical protein EZV62_001023 [Acer yangbiense]1.1e-0426.05Show/hide
Query:  DRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTI-IDNVGANMFRCKFKNARIKGRILDMGPWFMIVLYYFSRNPKETPAVRIWSSDMCHYGLI
        DR EQ+L   ++ K+  SK ++   F+ +M +IW     + I+ V  N+F  +FKN   + RIL  GPW           P  T  +     +   + + 
Subjt:  DRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTI-IDNVGANMFRCKFKNARIKGRILDMGPWFMIVLYYFSRNPKETPAVRIWSSDMCHYGLI

Query:  FINYLMLAFPGLRRKLLEA
          N+    + G  R +L +
Subjt:  FINYLMLAFPGLRRKLLEA

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]2.2e-1342Show/hide
Query:  MADD-LAKHLAELKVTPAEKSSVFQLPESEIDRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGRILDMGPWF
        MAD+ L++ +  LK+T  EK  +F + E EI+  +++   S++CK+ T K I   +FK+MMP+IW   +  I++VG N+F CKFK  R K +IL+ GP F
Subjt:  MADD-LAKHLAELKVTPAEKSSVFQLPESEIDRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGRILDMGPWF

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]3.3e-1443.52Show/hide
Query:  MADDLAKHLAE-LKVTPAEKSSVFQLPESEI-DRSEQKLTN-------SILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGR
        MAD+L   L E LK+T  EK  +F + E EI D  E ++ +       S++CK+ T K I   +FK+MMP+IW   +  I++VG N+F CKFK  R K +
Subjt:  MADDLAKHLAE-LKVTPAEKSSVFQLPESEI-DRSEQKLTN-------SILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGR

Query:  ILDMGPWF
        IL+ GPWF
Subjt:  ILDMGPWF

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]3.3e-1443.52Show/hide
Query:  MADDLAKHLAE-LKVTPAEKSSVFQLPESEI-DRSEQKLTN-------SILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGR
        MAD+L   L E LK+T  EK  +F + E EI D  E ++ +       S++CK+ T K I   +FK+MMP+IW   +  I++VG N+F CKFK  R K +
Subjt:  MADDLAKHLAE-LKVTPAEKSSVFQLPESEI-DRSEQKLTN-------SILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGR

Query:  ILDMGPWF
        IL+ GPWF
Subjt:  ILDMGPWF

TrEMBL top hitse value%identityAlignment
A0A5A7QST0 Zinc ion binding8.0e-0628.8Show/hide
Query:  DLAKHLAELKVTPAEKSSVFQLPESEIDRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTI-IDNVGANMFRCKFKNARIKGRILDMGPWFM--
        D+A+ + E+K     +     +    I+R   +++  +L K+++SK I+  +FK  MP I N    + I++VG N+F  +F++ + + R L  GPW +  
Subjt:  DLAKHLAELKVTPAEKSSVFQLPESEIDRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTI-IDNVGANMFRCKFKNARIKGRILDMGPWFM--

Query:  -IVLYYFSR---NPKET--PAVRIW
         +VL+   R   NP+E    ++ IW
Subjt:  -IVLYYFSR---NPKET--PAVRIW

A0A5C7IUB2 DUF4283 domain-containing protein5.2e-0526.05Show/hide
Query:  DRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTI-IDNVGANMFRCKFKNARIKGRILDMGPWFMIVLYYFSRNPKETPAVRIWSSDMCHYGLI
        DR EQ+L   ++ K+  SK ++   F+ +M +IW     + I+ V  N+F  +FKN   + RIL  GPW           P  T  +     +   + + 
Subjt:  DRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTI-IDNVGANMFRCKFKNARIKGRILDMGPWFMIVLYYFSRNPKETPAVRIWSSDMCHYGLI

Query:  FINYLMLAFPGLRRKLLEA
          N+    + G  R +L +
Subjt:  FINYLMLAFPGLRRKLLEA

A0A6J1CQJ5 uncharacterized protein LOC1110134131.0e-1342Show/hide
Query:  MADD-LAKHLAELKVTPAEKSSVFQLPESEIDRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGRILDMGPWF
        MAD+ L++ +  LK+T  EK  +F + E EI+  +++   S++CK+ T K I   +FK+MMP+IW   +  I++VG N+F CKFK  R K +IL+ GP F
Subjt:  MADD-LAKHLAELKVTPAEKSSVFQLPESEIDRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGRILDMGPWF

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X11.6e-1443.52Show/hide
Query:  MADDLAKHLAE-LKVTPAEKSSVFQLPESEI-DRSEQKLTN-------SILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGR
        MAD+L   L E LK+T  EK  +F + E EI D  E ++ +       S++CK+ T K I   +FK+MMP+IW   +  I++VG N+F CKFK  R K +
Subjt:  MADDLAKHLAE-LKVTPAEKSSVFQLPESEI-DRSEQKLTN-------SILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGR

Query:  ILDMGPWF
        IL+ GPWF
Subjt:  ILDMGPWF

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X21.6e-1443.52Show/hide
Query:  MADDLAKHLAE-LKVTPAEKSSVFQLPESEI-DRSEQKLTN-------SILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGR
        MAD+L   L E LK+T  EK  +F + E EI D  E ++ +       S++CK+ T K I   +FK+MMP+IW   +  I++VG N+F CKFK  R K +
Subjt:  MADDLAKHLAE-LKVTPAEKSSVFQLPESEI-DRSEQKLTN-------SILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGR

Query:  ILDMGPWF
        IL+ GPWF
Subjt:  ILDMGPWF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACGATCTTGCAAAACATCTTGCTGAGCTCAAAGTCACACCTGCAGAAAAATCTAGCGTTTTTCAGCTACCGGAGAGTGAGATTGATCGCTCAGAGCAAAAACT
GACCAACTCAATACTGTGCAAAATTTATACGAGCAAGAAAATCAGTGCTGGTATTTTCAAGTCTATGATGCCCAAGATATGGAATCAAGAACACACGATTATTGACAATG
TGGGCGCTAATATGTTCCGATGCAAATTTAAAAATGCAAGGATAAAGGGAAGGATCCTGGACATGGGGCCATGGTTTATGATCGTGCTCTACTACTTTTCGAGGAACCCA
AAGGAGACACCTGCTGTGAGGATATGGAGTTCAGATATGTGTCACTATGGACTCATTTTCATAAACTACCTTATGCTTGCTTTTCCAGGTCTTCGGCGGAAATTATTGGA
AGCCTACTCAGAAAGGTGGAGAAGGTGGATATCCCGGACGAATCAGATCCTTCGTGGAGCAAATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACGATCTTGCAAAACATCTTGCTGAGCTCAAAGTCACACCTGCAGAAAAATCTAGCGTTTTTCAGCTACCGGAGAGTGAGATTGATCGCTCAGAGCAAAAACT
GACCAACTCAATACTGTGCAAAATTTATACGAGCAAGAAAATCAGTGCTGGTATTTTCAAGTCTATGATGCCCAAGATATGGAATCAAGAACACACGATTATTGACAATG
TGGGCGCTAATATGTTCCGATGCAAATTTAAAAATGCAAGGATAAAGGGAAGGATCCTGGACATGGGGCCATGGTTTATGATCGTGCTCTACTACTTTTCGAGGAACCCA
AAGGAGACACCTGCTGTGAGGATATGGAGTTCAGATATGTGTCACTATGGACTCATTTTCATAAACTACCTTATGCTTGCTTTTCCAGGTCTTCGGCGGAAATTATTGGA
AGCCTACTCAGAAAGGTGGAGAAGGTGGATATCCCGGACGAATCAGATCCTTCGTGGAGCAAATCCTTGA
Protein sequenceShow/hide protein sequence
MADDLAKHLAELKVTPAEKSSVFQLPESEIDRSEQKLTNSILCKIYTSKKISAGIFKSMMPKIWNQEHTIIDNVGANMFRCKFKNARIKGRILDMGPWFMIVLYYFSRNP
KETPAVRIWSSDMCHYGLIFINYLMLAFPGLRRKLLEAYSERWRRWISRTNQILRGANP