CuGenDBv2

Gene ID	Lag0028104
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Genome location	chr8:13084672..13087287
RNA-Seq Expression	Lag0028104
Synteny	Lag0028104
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TKR75000.1 hypothetical protein D5086_0000289720 [Populus alba]

1.3e-55

40.3

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN
        G+ KFDG NFGYWKMQ++DYL  KK+H   L  +P+ M  EDW+ LD + +  IR+ LS  +A  V  E +  KLME+L+  YEKPS NNKV+ +KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN

Query:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD
        +++ E+  V  ++N   T+ NQL SV+IEF DE+ A+ LL SLP SWE M+T VSNS G + LK+ ++ DL +AEE+RR+ S + S+ GSTL + T+G+ 
Subjt:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD

Query:  KVDEDNEPSSSRKKWK------NRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI--VEEVVLACVES----------------------DTKYRGHH
        + D  +    SR +++      +R +VEC+ C K GHF   C K  + +     A I  V++ ++  V+S                           G H
Subjt:  KVDEDNEPSSSRKKWK------NRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI--VEEVVLACVES----------------------DTKYRGHH

Query:  GLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
         +V + +G+  K  GIGDV +KT  G    LQ+VR
Subjt:  GLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

TKR89927.1 hypothetical protein D5086_0000238200 [Populus alba]

8.6e-55

40.41

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN
        G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M  E+W+ LD + +  IR+ LS  +A  V  E +  KLME+L+  YEKPSANNKV+ +KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN

Query:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-
        ++M E+  V  ++N   T+ NQL SV+IEF DE+ A+ LL SLP SWE M+TAVSNS G + LK+ ++ DL +AEE+RR+ S + S+ GS L + T+G+ 
Subjt:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-

Query:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY
         D+        S   S+ K+ +R +VEC+ C K GHF   C K      +KPEA+        V++ ++  V+S                          
Subjt:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY

Query:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
         G HG+V + +G      GIGDV +KT  G    LQ++R
Subjt:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

TKR90717.1 hypothetical protein D5086_0000230290 [Populus alba]

1.3e-55

41.02

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN
        G+ KFDG NFGYWKMQ++DYL  KK+H   L  +P+ M +E+W+ LD + +  IR+ LS  +A  V  E +  KLME+L+  YEKPSANNKV+ +KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN

Query:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-
        ++M E+A V  ++N   T+ NQL SV IEF+DE+ A+ LL SLP SWE M+TAVSNS G + LK+ ++ DL +AEE+RR+ S + S+ GS L + T+G+ 
Subjt:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-

Query:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI--VEEVVLACVES----------------------DTKYRGHHG
         D+        S   S+ K+ +R +VEC+ C K GHF   C K    +     A    V++ ++  V S                           G HG
Subjt:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI--VEEVVLACVES----------------------DTKYRGHHG

Query:  LVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
        +V + +G      GIGDV +KT  G    LQ+VR
Subjt:  LVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

TKS02608.1 hypothetical protein D5086_0000161380 [Populus alba]

2.3e-55

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN
        G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M  E+W+ LD + +  IR+ LS  +A  V  E +  KLME+L+  YEKPSANNKV+ +KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN

Query:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-
        ++M E+  V  ++N   T+ NQL SV+IEF DE+ A+ LL SLP SWE M+TAVSNS G + LK+ ++ DL +AEE+RR+ S + S+ GS L + T+G+ 
Subjt:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-

Query:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY
         D+        S   S+ K+ +R +VEC+ C K GHF   C K      +KPEA+        V++ ++  V+S                          
Subjt:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY

Query:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
         G HG+V + +G   K  GIGDV +KT  G    LQ+VR
Subjt:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

TKS09800.1 hypothetical protein D5086_0000089010 [Populus alba]

1.7e-55

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN
        G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M  E+W+ LD + +  IR+ LS  +A  V  E +  KLME+L+  YEKPSANNKV+ +KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN

Query:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-
        ++M E+  V  ++N   T+ NQL SV+IEF DE+ A+ LL SLP SWE M+TAVSNS G + LK+ ++ DL +AEE+RR+ S + S+ GS L + T+G+ 
Subjt:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-

Query:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY
         D+        S   S+ K+ +R +VEC+ C K GHF   C K      +KPEA+        V++ ++  V+S                          
Subjt:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY

Query:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
         G HG+V + +G   K  GIGDV +KT  G    LQ+VR
Subjt:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

TrEMBL top hits

e value

%identity

Alignment

A0A4U5MYD6 CCHC-type domain-containing protein

6.5e-56

40.3

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN
        G+ KFDG NFGYWKMQ++DYL  KK+H   L  +P+ M  EDW+ LD + +  IR+ LS  +A  V  E +  KLME+L+  YEKPS NNKV+ +KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN

Query:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD
        +++ E+  V  ++N   T+ NQL SV+IEF DE+ A+ LL SLP SWE M+T VSNS G + LK+ ++ DL +AEE+RR+ S + S+ GSTL + T+G+ 
Subjt:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGKD

Query:  KVDEDNEPSSSRKKWK------NRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI--VEEVVLACVES----------------------DTKYRGHH
        + D  +    SR +++      +R +VEC+ C K GHF   C K  + +     A I  V++ ++  V+S                           G H
Subjt:  KVDEDNEPSSSRKKWK------NRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI--VEEVVLACVES----------------------DTKYRGHH

Query:  GLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
         +V + +G+  K  GIGDV +KT  G    LQ+VR
Subjt:  GLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

A0A4U5P1P0 CCHC-type domain-containing protein

4.2e-55

40.41

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN
        G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M  E+W+ LD + +  IR+ LS  +A  V  E +  KLME+L+  YEKPSANNKV+ +KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN

Query:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-
        ++M E+  V  ++N   T+ NQL SV+IEF DE+ A+ LL SLP SWE M+TAVSNS G + LK+ ++ DL +AEE+RR+ S + S+ GS L + T+G+ 
Subjt:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-

Query:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY
         D+        S   S+ K+ +R +VEC+ C K GHF   C K      +KPEA+        V++ ++  V+S                          
Subjt:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY

Query:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
         G HG+V + +G      GIGDV +KT  G    LQ++R
Subjt:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

A0A4U5P397 CCHC-type domain-containing protein

6.5e-56

41.02

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN
        G+ KFDG NFGYWKMQ++DYL  KK+H   L  +P+ M +E+W+ LD + +  IR+ LS  +A  V  E +  KLME+L+  YEKPSANNKV+ +KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN

Query:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-
        ++M E+A V  ++N   T+ NQL SV IEF+DE+ A+ LL SLP SWE M+TAVSNS G + LK+ ++ DL +AEE+RR+ S + S+ GS L + T+G+ 
Subjt:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-

Query:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI--VEEVVLACVES----------------------DTKYRGHHG
         D+        S   S+ K+ +R +VEC+ C K GHF   C K    +     A    V++ ++  V S                           G HG
Subjt:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI--VEEVVLACVES----------------------DTKYRGHHG

Query:  LVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
        +V + +G      GIGDV +KT  G    LQ+VR
Subjt:  LVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

A0A4U5PY83 CCHC-type domain-containing protein

1.1e-55

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN
        G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M  E+W+ LD + +  IR+ LS  +A  V  E +  KLME+L+  YEKPSANNKV+ +KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN

Query:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-
        ++M E+  V  ++N   T+ NQL SV+IEF DE+ A+ LL SLP SWE M+TAVSNS G + LK+ ++ DL +AEE+RR+ S + S+ GS L + T+G+ 
Subjt:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-

Query:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY
         D+        S   S+ K+ +R +VEC+ C K GHF   C K      +KPEA+        V++ ++  V+S                          
Subjt:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY

Query:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
         G HG+V + +G   K  GIGDV +KT  G    LQ+VR
Subjt:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

A0A4U5QGR0 Uncharacterized protein

8.4e-56

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN
        G+ KFDG +FGYWKMQ++DYL  KK+H   L  +P+ M  E+W+ LD + +  IR+ LS  +A  V  E +  KLME+L+  YEKPSANNKV+ +KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFN

Query:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-
        ++M E+  V  ++N   T+ NQL SV+IEF DE+ A+ LL SLP SWE M+TAVSNS G + LK+ ++ DL +AEE+RR+ S + S+ GS L + T+G+ 
Subjt:  MQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTL-VMTKGK-

Query:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY
         D+        S   S+ K+ +R +VEC+ C K GHF   C K      +KPEA+        V++ ++  V+S                          
Subjt:  -DKVDEDNEPSS---SRKKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANI-------VEEVVLACVES----------------------DTKY

Query:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
         G HG+V + +G   K  GIGDV +KT  G    LQ+VR
Subjt:  RGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

SwissProt top hits

e value

%identity

Alignment

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

6.7e-26

30.51

Show/hide

Query:  VMKFDGKN-FGYWKMQVKDYLTCKKVHKAL---KERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKF
        V KF+G N F  W+ +++D L  + +HK L    ++P  M  EDW  LDE A + IR+ LS D+ + +  E TA  +   L + Y   +  NK+Y  K+ 
Subjt:  VMKFDGKN-FGYWKMQVKDYLTCKKVHKAL---KERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKF

Query:  FNMQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCD-LAIAEEIRRQGSNKESTVGSTLVMTKG
        + + M E     S++N    LI QL ++ ++  +E  AI LL SLP S++ + T + +  G  T++  +V   L + E++R++  N+    G  L+ T+G
Subjt:  FNMQMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCD-LAIAEEIRRQGSNKESTVGSTLVMTKG

Query:  K----DKVDEDNEPSSSRKKWKNRNEV---ECYYCHKKGHFKYQC----RKFNEDQKRKPEANIV------EEVVLACVESD------------------
        +     +   +   S +R K KNR++     CY C++ GHFK  C    +   E   +K + N        + VVL   E +                  
Subjt:  K----DKVDEDNEPSSSRKKWKNRNEV---ECYYCHKKGHFKYQC----RKFNEDQKRKPEANIV------EEVVLACVESD------------------

Query:  ----TKYR--------GHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR
            T  R        G  G V+MGN   SK  GIGD+ +KT  G  LVL+DVR
Subjt:  ----TKYR--------GHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVR

Arabidopsis top hits

e value

%identity

Alignment

AT3G29785.1 unknown protein

1.1e-10

37.5

Show/hide

Query:  KFDGKNFGYWKMQVKDYLTCKKVHKALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKV
        K DG ++ + +M+++DYL  KK+H+ L ++ + MS +DW  L  + +  IR+ +S ++A  VA E +   LM+ L++ Y+KPS NN V
Subjt:  KFDGKNFGYWKMQVKDYLTCKKVHKALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTTTTGTAGAGCCAAAAAGTTTCGATGGAGTCATGAAGTTCGATGGGAAAAATTTTGGATATTGGAAGATGCAAGTCAAGGATTATTTAACTTGCAAGAAAGTGCA
TAAGGCATTGAAGGAAAGACCGAAAGATATGTCGGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAACCATTAGGATGTGTTTGTCGATGGATTTGGCAAGTC
TAGTAGCCCATGAGACAACTGCAGTCAAGTTGATGGAATCGCTTACAAACAGGTATGAAAAACCCTCTGCAAATAATAAGGTCTACCGAGTTAAGAAGTTTTTCAACATG
CAAATGTTTGAGGATGCTTTTGTGAATTCCTATATTAATGAGGTTACCACTTTGATTAATCAGTTAAAATCTGTTAAGATAGAATTTTCTGATGAGGTGAATGCTATTCA
GTTGTTAACGTCTTTACCTGATAGTTGGGAAACGATGAAGACAGCAGTGTCTAATTCGACTGGAAATAACACTTTAAAATTTTCAGAAGTTTGTGATTTAGCCATAGCTG
AGGAAATTCGTAGGCAGGGTAGTAATAAAGAGTCTACTGTAGGGTCAACTTTGGTTATGACTAAAGGTAAAGATAAGGTCGATGAAGATAATGAACCAAGTAGTAGTAGG
AAAAAGTGGAAAAACAGGAATGAGGTAGAATGTTATTACTGCCATAAGAAAGGTCACTTCAAGTATCAGTGTAGGAAATTTAATGAGGATCAGAAAAGAAAACCAGAGGC
AAATATAGTGGAGGAGGTTGTCTTAGCTTGTGTTGAGAGTGACACAAAGTATAGAGGGCATCATGGCCTTGTGAGGATGGGGAATGGTAGAACCTCCAAGACTAGAGGGA
TTGGAGATGTTAGTTTGAAGACAGAATGTGGAGGTAAATTGGTACTGCAAGATGTCAGATCCCAGGAAGTGGCAGTTGGTCACAGGAAATCTACACTGTACAGATGTCAG
TTGAATGTTGCCAAAGGTTCAGAGAGACAGTGGATGCCGGTTAAAGCTGCAGATGGTAGTTGTAGAGGTCCAGTTGAGCCAGCAGCAAGGATATCCAATTTCGATCAGTT
CGATCAAGATCCTTCAGTTCAGAAACAATTGGGAAGTCTAGGAGAGAAAGTTGATGGCTATCGTGAATCCCCAGTTGTCAAACGGTCGAATGAATTGAAGAAGTCGCTTA
GGCGAGTTGAGGCATCAAAGTTGAAGGCCAGGCAGTTGCTAAGGTCAAAGGAGCTTCCATACGGACCATGGCTACGAGAACCTGCAAGATTAAAATCAGTCGATGGAGGT
CAACTTGGAAGGAATATGCAGGGGAGAGGAAGAGGTCGTGGCTGGAATGGAAGCAATAGCCGGTGGGAGACAGAAAATTCCGACAACGAAGGGGAGGAGAGAAATGAAGC
AAGTGCTATACCTGTAGTGAAGGATTGGAATTCCATAATTCCGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGFVEPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVHKALKERPKDMSDEDWEALDEEAVATIRMCLSMDLASLVAHETTAVKLMESLTNRYEKPSANNKVYRVKKFFNM
QMFEDAFVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSTLVMTKGKDKVDEDNEPSSSR
KKWKNRNEVECYYCHKKGHFKYQCRKFNEDQKRKPEANIVEEVVLACVESDTKYRGHHGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLQDVRSQEVAVGHRKSTLYRCQ
LNVAKGSERQWMPVKAADGSCRGPVEPAARISNFDQFDQDPSVQKQLGSLGEKVDGYRESPVVKRSNELKKSLRRVEASKLKARQLLRSKELPYGPWLREPARLKSVDGG
QLGRNMQGRGRGRGWNGSNSRWETENSDNEGEERNEASAIPVVKDWNSIIP

Lag0028104 (gene) of Sponge gourd (AG-4) v1 genome