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Lag0028127 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028127
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHistone domain-containing protein
Genome locationchr8:13809452..13812701
RNA-Seq ExpressionLag0028127
SyntenyLag0028127
Gene Ontology termsGO:0000786 - nucleosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4937788.1 hypothetical protein JHK86_043929 [Glycine max]1.6e-0983.72Show/hide
Query:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
        P NTA+NFH TVLSKEQLFSKSQKV SWN  LTKD CGSGGSS
Subjt:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
KAG4937806.1 hypothetical protein JHK86_043947 [Glycine max]1.6e-0983.72Show/hide
Query:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
        P NTA+NFH TVLSKEQLFSKSQKV SWN  LTKD CGSGGSS
Subjt:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
PPD70745.1 hypothetical protein GOBAR_DD32371 [Gossypium barbadense]1.2e-0985.71Show/hide
Query:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGS
        P NTAYNFH TVLSKEQLFSKSQKV SWN  LTKD CGSGGS
Subjt:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGS
PPD70746.1 hypothetical protein GOBAR_DD32372 [Gossypium barbadense]1.2e-0985.71Show/hide
Query:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGS
        P NTAYNFH TVLSKEQLFSKSQKV SWN  LTKD CGSGGS
Subjt:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGS
RYR42385.1 hypothetical protein Ahy_A08g038857 [Arachis hypogaea]4.2e-1086.05Show/hide
Query:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
        P NTAYNFH TVLSKEQLFSKSQKV SWN  LTKD CGSGGSS
Subjt:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
TrEMBL top hitse value%identityAlignment
A0A445B9B0 Uncharacterized protein6.8e-0685.29Show/hide
Query:  AYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCG
        AYNFH TVLSKEQLFSKSQKV SWN  LTKD CG
Subjt:  AYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCG
A0A445BUI9 Uncharacterized protein2.1e-1086.05Show/hide
Query:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
        P NTAYNFH TVLSKEQLFSKSQKV SWN  LTKD CGSGGSS
Subjt:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
A0A445BZM7 Uncharacterized protein1.4e-0668.89Show/hide
Query:  RFPLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
        + PL+T YNFH T+LSKEQLFSKSQKV SW+  LTK+  GS GSS
Subjt:  RFPLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
A0A6A5LC74 Uncharacterized protein5.1e-0981.4Show/hide
Query:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
        P NTAYNFH TVLSKE+LFSKSQKV SWN  LTKD CGS GSS
Subjt:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
A0A6D2L8U9 Histone domain-containing protein1.9e-0879.07Show/hide
Query:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
        P NTAYNFH TVLSKEQLFSKSQK  SWN   TKD CGS GSS
Subjt:  PLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLCGSGGSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAAAAGGATTACAATAACAGGAAACCGGCTACACCAGTACGAGAACCGACAGAAAAAAAAACTGATAAAGCGTCGGAGTTGACGCTGCTGCATGCAACATTAAC
GCACTTCTTGCAGCAACCCTGTGGGAGGCTATCATCATTATCATCACAGTTCAACAGTCGTGTACAGTTTCATAACGACTTGATGCGCTTTCTAGTTGTGCAGACTCAGT
GTCGTGATGCTGTCGCGTTGCGTGCCCTAATAATTCCGGAAAGTCTCGCAGCGTCCTGGCGCTGCCTCAAAAATGTGCGTTCTGACTTATGGGGCAACGTTGAGACGCTG
TCTATGGGGCGTCTCAACGCTACCCTTTTGAATAGGGGCCTTGAACCTAGTCTTCTTTGCTTATTTCTTCACTCGATTTATTCTTTAGCTCCCAAATCATCGCTTTATTC
AAGCAACGATAGTCCATGCACACACTTCATCCTTGCCAAAGCCCATGTAACCAAGTATGACATCAAGATCGAGGTGGTTTACTGGTGCTTAGAGAACTACCTGAGATTCC
CTTTGAACACTGCTTACAACTTTCATGGTACTGTGCTCTCCAAAGAGCAACTCTTCTCAAAATCTCAAAAGGTACCGAGTTGGAATGCCACTCTAACTAAGGATTTGTGT
GGTTCTGGAGGATCCAGCAAAGCGTTCAGACTCATGTGCCTTCCAGAACCAGGGATCTTCGAGTCTGTTGCGTATAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAAAAGGATTACAATAACAGGAAACCGGCTACACCAGTACGAGAACCGACAGAAAAAAAAACTGATAAAGCGTCGGAGTTGACGCTGCTGCATGCAACATTAAC
GCACTTCTTGCAGCAACCCTGTGGGAGGCTATCATCATTATCATCACAGTTCAACAGTCGTGTACAGTTTCATAACGACTTGATGCGCTTTCTAGTTGTGCAGACTCAGT
GTCGTGATGCTGTCGCGTTGCGTGCCCTAATAATTCCGGAAAGTCTCGCAGCGTCCTGGCGCTGCCTCAAAAATGTGCGTTCTGACTTATGGGGCAACGTTGAGACGCTG
TCTATGGGGCGTCTCAACGCTACCCTTTTGAATAGGGGCCTTGAACCTAGTCTTCTTTGCTTATTTCTTCACTCGATTTATTCTTTAGCTCCCAAATCATCGCTTTATTC
AAGCAACGATAGTCCATGCACACACTTCATCCTTGCCAAAGCCCATGTAACCAAGTATGACATCAAGATCGAGGTGGTTTACTGGTGCTTAGAGAACTACCTGAGATTCC
CTTTGAACACTGCTTACAACTTTCATGGTACTGTGCTCTCCAAAGAGCAACTCTTCTCAAAATCTCAAAAGGTACCGAGTTGGAATGCCACTCTAACTAAGGATTTGTGT
GGTTCTGGAGGATCCAGCAAAGCGTTCAGACTCATGTGCCTTCCAGAACCAGGGATCTTCGAGTCTGTTGCGTATAATTAG
Protein sequenceShow/hide protein sequence
MREKDYNNRKPATPVREPTEKKTDKASELTLLHATLTHFLQQPCGRLSSLSSQFNSRVQFHNDLMRFLVVQTQCRDAVALRALIIPESLAASWRCLKNVRSDLWGNVETL
SMGRLNATLLNRGLEPSLLCLFLHSIYSLAPKSSLYSSNDSPCTHFILAKAHVTKYDIKIEVVYWCLENYLRFPLNTAYNFHGTVLSKEQLFSKSQKVPSWNATLTKDLC
GSGGSSKAFRLMCLPEPGIFESVAYN