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Lag0028136 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028136
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr8:14195979..14196944
RNA-Seq ExpressionLag0028136
SyntenyLag0028136
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]1.1e-0537.76Show/hide
Query:  GNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVE-------GHDSLQYNEEAGNQ--HWEHHP
        G+   +NP  + L++AL+ +   G +W    T+   L P DL  E +VWL FIK  +MPT HD+TIS+E         DS Q+NE +      W  HP
Subjt:  GNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVE-------GHDSLQYNEEAGNQ--HWEHHP

KAA0047856.1 hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa]1.1e-0540.48Show/hide
Query:  TLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVE
        T+  IY +K   +  G+   KNP  + L+EAL+     G +W +  T +  L P +L  E +VWL FIK  +MPT HDN IS+E
Subjt:  TLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVE

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]3.3e-0534.12Show/hide
Query:  SGLTLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTIS
        S   +  IY +K   +  GN  I +P+ +Q+++AL+V+ + G++W  S   V +L    L  E  +W++ +K RL+ TTHD T+S
Subjt:  SGLTLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTIS

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]6.7e-0632.94Show/hide
Query:  SGLTLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTIS
        S   +  +Y +K  L   GN  I +P    +++ L+V+ + G QW  S   +K+L    L PE  +W++ +K RL+PT+H+ T+S
Subjt:  SGLTLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTIS

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]3.9e-0631.76Show/hide
Query:  SGLTLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTIS
        S   +  +Y +K      GN  I +P  +++++AL+ + + G QW  S   +K+L    L PE  +W++ +K R++PT+HD T+S
Subjt:  SGLTLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTIS

TrEMBL top hitse value%identityAlignment
A0A2P5DXM3 Uncharacterized protein1.4e-0424.35Show/hide
Query:  NDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVEG----HDSLQYNEEAGNQHWEHHPRRDSLLWE
        ++ I+N +  +L   L+ +A  G +W  S     + +   L P   VW HF+K+RL+PTTH   +S +     H  L  N ++ N     H    +    
Subjt:  NDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVEG----HDSLQYNEEAGNQHWEHHPRRDSLLWE

Query:  KKSGEVILPTI------DLP-LIGKLQQYNAQRKDKASTFQATPSLGLTSASPPPHTPVSGPTPSSEALAFAFRQLDRIEDRL----------KTYWVYA
        +K+G +  P++      + P L+ + + +N    D  +  + T   G T ++  P +       SS       +QL  +E RL          + +W Y+
Subjt:  KKSGEVILPTI------DLP-LIGKLQQYNAQRKDKASTFQATPSLGLTSASPPPHTPVSGPTPSSEALAFAFRQLDRIEDRL----------KTYWVYA

Query:  KEHDEAIREFYLSISPSIAPVFLDFPPSLL
        KE D A+++   +      P F  FP  +L
Subjt:  KEHDEAIREFYLSISPSIAPVFLDFPPSLL

A0A5A7TZE0 Protein MNN4-like1.4e-0446.88Show/hide
Query:  KNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVE
        K PS   ++ AL+ +A  G++W  +  K   L P +LK   +VWL FIK  LMPT HDNTIS+E
Subjt:  KNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVE

A0A5A7U0U4 Uncharacterized protein5.5e-0640.48Show/hide
Query:  TLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVE
        T+  IY +K   +  G+   KNP  + L+EAL+     G +W +  T +  L P +L  E +VWL FIK  +MPT HDN IS+E
Subjt:  TLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVE

A0A5D3CW17 Uncharacterized protein5.5e-0637.76Show/hide
Query:  GNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVE-------GHDSLQYNEEAGNQ--HWEHHP
        G+   +NP  + L++AL+ +   G +W    T+   L P DL  E +VWL FIK  +MPT HD+TIS+E         DS Q+NE +      W  HP
Subjt:  GNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTISVE-------GHDSLQYNEEAGNQ--HWEHHP

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220072.7e-0538.81Show/hide
Query:  RGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTI
        RGN+ + +PS +Q++EA +++ R    W  S     SL P+D+  + TVW++ +KNRL+PT++D++I
Subjt:  RGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGGGGTTCTCTAATCGAGTTAGTGCTTTGCCCGAGTTTGTGTCCAAAGTCATTTCGCAGTACAAGTGGCAGGAGTTCTGGGCTCACCCTCAAGAGGATTTATTG
GGTCAAAGCTCCTTTGCACCAGAGAGGAAATGATGCTATAAAGAATCCATCGGTCAAGCAACTGAAGGAAGCACTCAAAGTAATGGCCAGGAAGGGAGTTCAATGGAAAG
AATCTCAAACTAAAGTGAAGTCTTTAGTGCCAATCGATCTGAAGCCTGAACCGACAGTTTGGCTTCATTTTATCAAGAATAGGTTGATGCCCACCACTCATGACAACACG
ATTTCAGTAGAGGGTCATGATTCTCTACAGTATAATGAAGAGGCTGGAAATCAACATTGGGAGCATCATCCGAGAAGAGATTCTCTCCTGTGGGAGAAAAAGAGCGGGGA
AGTTATTCTGCCTACGATTGACTTGCCTCTGATAGGGAAGCTGCAACAATACAATGCGCAAAGGAAAGATAAAGCTTCCACCTTCCAAGCTACTCCTTCGCTGGGATTGA
CATCTGCTTCACCACCACCACATACTCCTGTTTCAGGGCCTACCCCATCATCTGAGGCCCTTGCATTCGCTTTTCGCCAGCTAGATCGCATCGAGGATCGGTTAAAAACT
TATTGGGTCTACGCAAAGGAGCATGACGAAGCAATTAGGGAGTTTTATCTCTCTATCTCCCCGAGCATAGCTCCTGTTTTTCTTGATTTTCCTCCAAGCCTGCTGCCTCA
AGATCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGGGGTTCTCTAATCGAGTTAGTGCTTTGCCCGAGTTTGTGTCCAAAGTCATTTCGCAGTACAAGTGGCAGGAGTTCTGGGCTCACCCTCAAGAGGATTTATTG
GGTCAAAGCTCCTTTGCACCAGAGAGGAAATGATGCTATAAAGAATCCATCGGTCAAGCAACTGAAGGAAGCACTCAAAGTAATGGCCAGGAAGGGAGTTCAATGGAAAG
AATCTCAAACTAAAGTGAAGTCTTTAGTGCCAATCGATCTGAAGCCTGAACCGACAGTTTGGCTTCATTTTATCAAGAATAGGTTGATGCCCACCACTCATGACAACACG
ATTTCAGTAGAGGGTCATGATTCTCTACAGTATAATGAAGAGGCTGGAAATCAACATTGGGAGCATCATCCGAGAAGAGATTCTCTCCTGTGGGAGAAAAAGAGCGGGGA
AGTTATTCTGCCTACGATTGACTTGCCTCTGATAGGGAAGCTGCAACAATACAATGCGCAAAGGAAAGATAAAGCTTCCACCTTCCAAGCTACTCCTTCGCTGGGATTGA
CATCTGCTTCACCACCACCACATACTCCTGTTTCAGGGCCTACCCCATCATCTGAGGCCCTTGCATTCGCTTTTCGCCAGCTAGATCGCATCGAGGATCGGTTAAAAACT
TATTGGGTCTACGCAAAGGAGCATGACGAAGCAATTAGGGAGTTTTATCTCTCTATCTCCCCGAGCATAGCTCCTGTTTTTCTTGATTTTCCTCCAAGCCTGCTGCCTCA
AGATCAATAA
Protein sequenceShow/hide protein sequence
MRRGSLIELVLCPSLCPKSFRSTSGRSSGLTLKRIYWVKAPLHQRGNDAIKNPSVKQLKEALKVMARKGVQWKESQTKVKSLVPIDLKPEPTVWLHFIKNRLMPTTHDNT
ISVEGHDSLQYNEEAGNQHWEHHPRRDSLLWEKKSGEVILPTIDLPLIGKLQQYNAQRKDKASTFQATPSLGLTSASPPPHTPVSGPTPSSEALAFAFRQLDRIEDRLKT
YWVYAKEHDEAIREFYLSISPSIAPVFLDFPPSLLPQDQ