; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028144 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028144
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr8:14392752..14402433
RNA-Seq ExpressionLag0028144
SyntenyLag0028144
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR005162 - Retrotransposon gag domain
IPR021109 - Aspartic peptidase domain superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]0.0e+0053.5Show/hide
Query:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE
        EIGR +RA PSDP+K YGIERLKKLGAT+F+GSTDPADAE WLN+LEKCFDVM+CPEERKV+LATFLLQKEAEGWWKSI+ RRSDAR LDWQTFRGIFE+
Subjt:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE

Query:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF
        KYYP+TYCEAKRDEFL LKQG                           L + ++ R    L     V+     +R  RFERGLRFEIRT VTAIAKWTNF
Subjt:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF

Query:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------
        SQLVETAL VEQSI EEK A+                                                                               
Subjt:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------

Query:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------
                                                     DQGV S T+EQ +      EGTSGA                              
Subjt:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------

Query:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD
                                         RMLEPLSE L I TPVGDVLLV EVLR+CEV+VEG+ +LVDLLPLELQ LDVILG+DFLF HYASMD
Subjt:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD

Query:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS
        CH K++ F+KPG  E VFRG RK +  SLIS LKAEKLLRKGCT FL H+V VQ EKLKPEDVPVV E+LDVFP DLSGLPPDRE+EFTIELLPGT PIS
Subjt:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS

Query:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------
        QAPYRMAPSELK+LK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI                                      
Subjt:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------

Query:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV
                                                    QFVIVFIDDILVYS+DR++HEEHLRIVLQTLR+KQLYAKFSKCEFWL QVVFLGHV
Subjt:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV

Query:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA
        VSA  VS+DPQKVEAVVNWERP  ATE                                           SFQELKKRLVT+PIL LPVTGK+YVIYCDA
Subjt:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA

Query:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN
        SR GLG VLMQ+  VIAYASRQLK+HECNY  HDLE+  VVLALKIWRHYLF                                            GKAN
Subjt:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN

Query:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN
        VVA ALSRKSRL KSALCGIR +L                            L+ EIVRRQ EDSN QK   KSKKG E EFELR DGAIVK+GRLCVPN
Subjt:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN

Query:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG
        ISELK AILEE HSSAYAMHP STKMYRTLKKTYWWSGMK++IAEYVDRCLICQQVKPVRQRPGG LNPLPVPEWKWEHITM+FLFG
Subjt:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG

KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]0.0e+0052.54Show/hide
Query:  VEIELPVPDTLPTSAESFISSSSSTLQ---EGQRVSL----------------------EEDDVHWLHAIFRAKLAGGCCSPPSD-YRKRTGCHKSHVTT
        VEIELPVPD LPTSAES  S+SS+ L+   E   V +                        DDV WLHAIFRAK AGG     +  Y+ +  CH      
Subjt:  VEIELPVPDTLPTSAESFISSSSSTLQ---EGQRVSL----------------------EEDDVHWLHAIFRAKLAGGCCSPPSD-YRKRTGCHKSHVTT

Query:  YQQTTQAESGQDAEIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDAR
          +     S    EIGRPE+AGPSD +KMYGIERLKKLGAT+F+GSTDPADAEVWLN+LEKCFDVMSCP+ERKVKLATFLL KEAEGWWKSII RR+DAR
Subjt:  YQQTTQAESGQDAEIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDAR

Query:  TLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEI
        TLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQ                  W         L + K+ R    L     ++     +R  RFERGLRFEI
Subjt:  TLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEI

Query:  RTLVTAIAKWTNFSQLVETALHVEQSIIEEKMAL------------------------------------------------------------------
        RT VTAIAKW NFSQLVETAL V+QSI+EEK A+                                                                  
Subjt:  RTLVTAIAKWTNFSQLVETALHVEQSIIEEKMAL------------------------------------------------------------------

Query:  ----------------------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA-----------------
                                                                  DQGVESHTVEQ +    AGE TSGA                 
Subjt:  ----------------------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA-----------------

Query:  ----------------------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVIL
                                                      RMLEPL EELVICTPVGDVLLV EVL DCEVVVEGL M VDLLPLELQ LDVIL
Subjt:  ----------------------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVIL

Query:  GIDFLFTHYASMDCHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVE
        G+DFLFTHYASM+CH K++TFKKPG TE +F+GER IIPTSLISALKAEKLLRKGCT FL HVVEVQEEKLKPEDVPVVNEYLDVFP DLSGL PDREVE
Subjt:  GIDFLFTHYASMDCHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVE

Query:  FTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH------------------------
        FTIELLPGT PISQAPYRMAPSELK+LKVQLQELVDKGYIRPSVS WGAPVLFVKKKDGTLRLCIDYRQLNKVTI                         
Subjt:  FTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH------------------------

Query:  ---------------------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKC
                                                                 QFVIVFIDDILVYS+D+KAHEEHLRIVLQ LRDKQLY KFSKC
Subjt:  ---------------------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKC

Query:  EFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTL
        EFWLNQVVFLGHVVSA  VS+DPQKVE VVNWERPA ATE                                           SFQELKKRLVT+PILTL
Subjt:  EFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTL

Query:  PVTGKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF-----------------------------------
        P++GKEYVIYCDASRQGLG VLMQE KVIAY SRQLKKHE NY  HDLE+  VVLALKIWRHYLF                                   
Subjt:  PVTGKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF-----------------------------------

Query:  ---------GKANVVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRAD
                 GKANVVA ALSRKSRL KSALCGIRASL                            L+AEIV RQPEDSN QKMLAK+K+GPE EFELR D
Subjt:  ---------GKANVVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRAD

Query:  GAIVKEGRLCVPNISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG
        GAIVK+GRLCVP IS LKGAIL E H+S YAMH  STKMYRTLKKTYWW                     P+RQRPGGLLNPLPVPEWKWEHIT +FLFG
Subjt:  GAIVKEGRLCVPNISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]0.0e+0051Show/hide
Query:  DKTVEIELPVPDTLPTSAES------------FISSSSSTLQEGQRVSLEEDDVHWLHAIFRAKLAGGCCSPPSDYRKRTGCHKSHVTTYQQTTQAESG-
        D  VEI+ PVPD LP                   SSS  + ++ +++ ++++ V  LHAIFR+K+AG    PP   R+R           Q  +  ES  
Subjt:  DKTVEIELPVPDTLPTSAES------------FISSSSSTLQEGQRVSLEEDDVHWLHAIFRAKLAGGCCSPPSDYRKRTGCHKSHVTTYQQTTQAESG-

Query:  --------------QDAEIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRR
                         EIGR +RA PSDP+K YGIERLKKLGAT+F+GSTDPADAE WLN+LEKCFDVM+CPEERKV+LATFLLQKEAEGWWKSI+ RR
Subjt:  --------------QDAEIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRR

Query:  SDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGL
        SDAR LDWQTFRGIFE+KYYP+TYCEAKRDEFL LKQG                           L + ++ R    L     V+     +R  RFERGL
Subjt:  SDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGL

Query:  RFEIRTLVTAIAKWTNFSQLVETALHVEQSIIEEKMAL--------------------------------------------------------------
        RFEIRT VTAIAKWTNFSQLVETAL VEQSI EEK A+                                                              
Subjt:  RFEIRTLVTAIAKWTNFSQLVETALHVEQSIIEEKMAL--------------------------------------------------------------

Query:  --------------------------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA-------------
                                                                      DQGV S T+EQ +      EGTSGA             
Subjt:  --------------------------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA-------------

Query:  --------------------------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQAL
                                                          RMLEPLSE L I TPVGDVLLV EVLR+CEV+VEG+ +LVDLLPLELQ L
Subjt:  --------------------------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQAL

Query:  DVILGIDFLFTHYASMDCHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPD
        DVILG+DFLF HYASMDCH K++ F+KPG  E VFRG RK +  SLIS LKAEKLLRKGCT FL H+V VQ EKLKPEDVPVV E+LDVFP DLSGLPPD
Subjt:  DVILGIDFLFTHYASMDCHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPD

Query:  REVEFTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH--------------------
        RE+EFTIELLPGT PISQAPYRMAPSELK+LK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI                     
Subjt:  REVEFTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH--------------------

Query:  -------------------------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAK
                                                                     QFVIVFIDDILVYS+DR++HEEHLRIVLQTLR+KQLYAK
Subjt:  -------------------------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAK

Query:  FSKCEFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSP
        FSKCEFWL QVVFLGHVVSA  VS+DPQKVEAVVNWERP  ATE                                           SFQELKKRLVT+P
Subjt:  FSKCEFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSP

Query:  ILTLPVTGKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF-------------------------------
        IL LPVTGK+YVIYCDASR GLG VLMQ+  VIAYASRQLK+HECNY  HDLE+  VVLALKIWRHYLF                               
Subjt:  ILTLPVTGKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF-------------------------------

Query:  -------------GKANVVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFE
                     GKANVVA ALSRKSRL KSALCGIR +L                            L+ EIVRRQ EDSN QK   KSKKG E EFE
Subjt:  -------------GKANVVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFE

Query:  LRADGAIVKEGRLCVPNISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMN
        LR DGAIVK+GRLCVPNISELK AILEE HSSAYAMHP STKMYRTLKKTYWWSGMK++IAEYVDRCLICQQVKPVRQRPGG LNPLPVPEWKWEHITM+
Subjt:  LRADGAIVKEGRLCVPNISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMN

Query:  FLFG
        FLFG
Subjt:  FLFG

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]0.0e+0053.5Show/hide
Query:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE
        EIGR +RA PSDP+K YGIERLKKLGAT+F+GSTDPADAE WLN+LEKCFDVM+CPEERKV+LATFLLQKEAEGWWKSI+ RRSDAR LDWQTFRGIFE+
Subjt:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE

Query:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF
        KYYP+TYCEAKRDEFL LKQG                           L + ++ R    L     V+     +R  RFERGLRFEIRT VTAIAKWTNF
Subjt:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF

Query:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------
        SQLVETAL VEQSI EEK A+                                                                               
Subjt:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------

Query:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------
                                                     DQGV S T+EQ +      EGTSGA                              
Subjt:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------

Query:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD
                                         RMLEPLSE L I TPVGDVLLV EVLR+CEV+VEG+ +LVDLLPLELQ LDVILG+DFLF HYASMD
Subjt:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD

Query:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS
        CH K++ F+KPG  E VFRG RK +  SLIS LKAEKLLRKGCT FL H+V VQ EKLKPEDVPVV E+LDVFP DLSGLPPDRE+EFTIELLPGT PIS
Subjt:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS

Query:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------
        QAPYRMAPSELK+LK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI                                      
Subjt:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------

Query:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV
                                                    QFVIVFIDDILVYS+DR++HEEHLRIVLQTLR+KQLYAKFSKCEFWL QVVFLGHV
Subjt:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV

Query:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA
        VSA  VS+DPQKVEAVVNWERP  ATE                                           SFQELKKRLVT+PIL LPVTGK+YVIYCDA
Subjt:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA

Query:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN
        SR GLG VLMQ+  VIAYASRQLK+HECNY  HDLE+  VVLALKIWRHYLF                                            GKAN
Subjt:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN

Query:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN
        VVA ALSRKSRL KSALCGIR +L                            L+ EIVRRQ EDSN QK   KSKKG E EFELR DGAIVK+GRLCVPN
Subjt:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN

Query:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG
        ISELK AILEE HSSAYAMHP STKMYRTLKKTYWWSGMK++IAEYVDRCLICQQVKPVRQRPGG LNPLPVPEWKWEHITM+FLFG
Subjt:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]0.0e+0052.62Show/hide
Query:  VEIELPVPDTLPTSAESFISSSSSTLQ---EGQRVSL----------------------EEDDVHWLHAIFRAKLAGGCCSPPSD-YRKRTGCHKSHVTT
        VEIELPVPD LPTSAES  S+SS+ L+   E   V +                        DDV WLHAIFRAK AGG     +  Y+ +  CH      
Subjt:  VEIELPVPDTLPTSAESFISSSSSTLQ---EGQRVSL----------------------EEDDVHWLHAIFRAKLAGGCCSPPSD-YRKRTGCHKSHVTT

Query:  YQQTTQAESGQDAEIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDAR
          +     S    EIGRPE+AGPSD +KMYGIERLKKLGAT+F+GSTDPADAEVWLN+LEKCFDVMSCP+ERKVKLATFLLQKEAEGWWKSII RR+DAR
Subjt:  YQQTTQAESGQDAEIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDAR

Query:  TLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEI
        TLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQ                  W         L + K+ R    L     ++     +R  RFERGLRFEI
Subjt:  TLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEI

Query:  RTLVTAIAKWTNFSQLVETALHVEQSIIEEKMAL------------------------------------------------------------------
        RT VTAIAKW NFSQLVETAL V+QSI+EEK A+                                                                  
Subjt:  RTLVTAIAKWTNFSQLVETALHVEQSIIEEKMAL------------------------------------------------------------------

Query:  ----------------------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA-----------------
                                                                  DQGVESHTVEQ +    AGE TSGA                 
Subjt:  ----------------------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA-----------------

Query:  ----------------------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVIL
                                                      RMLEPL EELVICTPVGDVLLV EVL DCEVVVEGL M VDLLPLELQ LDVIL
Subjt:  ----------------------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVIL

Query:  GIDFLFTHYASMDCHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVE
        G+DFLFTHYASM+CH K++TFKKPG TE +F+GER IIPTSLISALKAEKLLRKGCT FL HVVEVQEEKLKPEDVPVVNEYLDVFP DLSGL PDREVE
Subjt:  GIDFLFTHYASMDCHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVE

Query:  FTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH------------------------
        FTIELLPGT PISQAPYRMAPSELK+LKVQLQELVDKGYIRPSVS WGAPVLFVKKKDGTLRLCIDYRQLNKVTI                         
Subjt:  FTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH------------------------

Query:  ---------------------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKC
                                                                 QFVIVFIDDILVYS+D+KAHEEHLRIVLQ LRDKQLY KFSKC
Subjt:  ---------------------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKC

Query:  EFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTL
        EFWLNQVVFLGHVVSA  VS+DPQKVE VVNWERPA ATE                                           SFQELKKRLVT+PILTL
Subjt:  EFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTL

Query:  PVTGKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF-----------------------------------
        P++GKEYVIYCDASRQGLG VLMQE KVIAY SRQLKKHE NY  HDLE+  VVLALKIWRHYLF                                   
Subjt:  PVTGKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF-----------------------------------

Query:  ---------GKANVVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRAD
                 GKANVVA ALSRKSRL KSALCGIRASL                            L+AEIV RQPEDSN QKMLAK+K+GPE EFELR D
Subjt:  ---------GKANVVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRAD

Query:  GAIVKEGRLCVPNISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG
        GAIVK+GRLCVP IS LKGAIL E H+S YAMH  STKMYRTLKKTYWW                     P+RQRPGGLLNPLPVPEWKWEHIT +FLFG
Subjt:  GAIVKEGRLCVPNISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG

TrEMBL top hitse value%identityAlignment
A0A5A7T1Y5 Reverse transcriptase0.0e+0053.5Show/hide
Query:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE
        EIGR +RA PSDP+K YGIERLKKLGAT+F+GSTDPADAE WLN+LEKCFDVM+CPEERKV+LATFLLQKEAEGWWKSI+ RRSDAR LDWQTFRGIFE+
Subjt:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE

Query:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF
        KYYP+TYCEAKRDEFL LKQG                           L + ++ R    L     V+     +R  RFERGLRFEIRT VTAIAKWTNF
Subjt:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF

Query:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------
        SQLVETAL VEQSI EEK A+                                                                               
Subjt:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------

Query:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------
                                                     DQGV S T+EQ +      EGTSGA                              
Subjt:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------

Query:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD
                                         RMLEPLSE L I TPVGDVLLV EVLR+CEV+VEG+ +LVDLLPLELQ LDVILG+DFLF HYASMD
Subjt:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD

Query:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS
        CH K++ F+KPG  E VFRG RK +  SLIS LKAEKLLRKGCT FL H+V VQ EKLKPEDVPVV E+LDVFP DLSGLPPDRE+EFTIELLPGT PIS
Subjt:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS

Query:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------
        QAPYRMAPSELK+LK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI                                      
Subjt:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------

Query:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV
                                                    QFVIVFIDDILVYS+DR++HEEHLRIVLQTLR+KQLYAKFSKCEFWL QVVFLGHV
Subjt:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV

Query:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA
        VSA  VS+DPQKVEAVVNWERP  ATE                                           SFQELKKRLVT+PIL LPVTGK+YVIYCDA
Subjt:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA

Query:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN
        SR GLG VLMQ+  VIAYASRQLK+HECNY  HDLE+  VVLALKIWRHYLF                                            GKAN
Subjt:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN

Query:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN
        VVA ALSRKSRL KSALCGIR +L                            L+ EIVRRQ EDSN QK   KSKKG E EFELR DGAIVK+GRLCVPN
Subjt:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN

Query:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG
        ISELK AILEE HSSAYAMHP STKMYRTLKKTYWWSGMK++IAEYVDRCLICQQVKPVRQRPGG LNPLPVPEWKWEHITM+FLFG
Subjt:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG

A0A5A7TDR2 Reverse transcriptase0.0e+0053.5Show/hide
Query:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE
        EIGR +RA PSDP+K YGIERLKKLGAT+F+GSTDPADAE WLN+LEKCFDVM+CPEERKV+LATFLLQKEAEGWWKSI+ RRSDAR LDWQTFRGIFE+
Subjt:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE

Query:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF
        KYYP+TYCEAKRDEFL LKQG                           L + ++ R    L     V+     +R  RFERGLRFEIRT VTAIAKWTNF
Subjt:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF

Query:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------
        SQLVETAL VEQSI EEK A+                                                                               
Subjt:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------

Query:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------
                                                     DQGV S T+EQ +      EGTSGA                              
Subjt:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------

Query:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD
                                         RMLEPLSE L I TPVGDVLLV EVLR+CEV+VEG+ +LVDLLPLELQ LDVILG+DFLF HYASMD
Subjt:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD

Query:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS
        CH K++ F+KPG  E VFRG RK +  SLIS LKAEKLLRKGCT FL H+V VQ EKLKPEDVPVV E+LDVFP DLSGLPPDRE+EFTIELLPGT PIS
Subjt:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS

Query:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------
        QAPYRMAPSELK+LK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI                                      
Subjt:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------

Query:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV
                                                    QFVIVFIDDILVYS+DR++HEEHLRIVLQTLR+KQLYAKFSKCEFWL QVVFLGHV
Subjt:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV

Query:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA
        VSA  VS+DPQKVEAVVNWERP  ATE                                           SFQELKKRLVT+PIL LPVTGK+YVIYCDA
Subjt:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA

Query:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN
        SR GLG VLMQ+  VIAYASRQLK+HECNY  HDLE+  VVLALKIWRHYLF                                            GKAN
Subjt:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN

Query:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN
        VVA ALSRKSRL KSALCGIR +L                            L+ EIVRRQ EDSN QK   KSKKG E EFELR DGAIVK+GRLCVPN
Subjt:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN

Query:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG
        ISELK AILEE HSSAYAMHP STKMYRTLKKTYWWSGMK++IAEYVDRCLICQQVKPVRQRPGG LNPLPVPEWKWEHITM+FLFG
Subjt:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG

A0A5A7U2V7 Reverse transcriptase0.0e+0053.5Show/hide
Query:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE
        EIGR +RA PSDP+K YGIERLKKLGAT+F+GSTDPADAE WLN+LEKCFDVM+CPEERKV+LATFLLQKEAEGWWKSI+ RRSDAR LDWQTFRGIFE+
Subjt:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE

Query:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF
        KYYP+TYCEAKRDEFL LKQG                           L + ++ R    L     V+     +R  RFERGLRFEIRT VTAIAKWTNF
Subjt:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF

Query:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------
        SQLVETAL VEQSI EEK A+                                                                               
Subjt:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------

Query:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------
                                                     DQGV S T+EQ +      EGTSGA                              
Subjt:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------

Query:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD
                                         RMLEPLSE L I TPVGDVLLV EVLR+CEV+VEG+ +LVDLLPLELQ LDVILG+DFLF HYASMD
Subjt:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD

Query:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS
        CH K++ F+KPG  E VFRG RK +  SLIS LKAEKLLRKGCT FL H+V VQ EKLKPEDVPVV E+LDVFP DLSGLPPDRE+EFTIELLPGT PIS
Subjt:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS

Query:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------
        QAPYRMAPSELK+LK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI                                      
Subjt:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------

Query:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV
                                                    QFVIVFIDDILVYS+DR++HEEHLRIVLQTLR+KQLYAKFSKCEFWL QVVFLGHV
Subjt:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV

Query:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA
        VSA  VS+DPQKVEAVVNWERP  ATE                                           SFQELKKRLVT+PIL LPVTGK+YVIYCDA
Subjt:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA

Query:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN
        SR GLG VLMQ+  VIAYASRQLK+HECNY  HDLE+  VVLALKIWRHYLF                                            GKAN
Subjt:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN

Query:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN
        VVA ALSRKSRL KSALCGIR +L                            L+ EIVRRQ EDSN QK   KSKKG E EFELR DGAIVK+GRLCVPN
Subjt:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN

Query:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG
        ISELK AILEE HSSAYAMHP STKMYRTLKKTYWWSGMK++IAEYVDRCLICQQVKPVRQRPGG LNPLPVPEWKWEHITM+FLFG
Subjt:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG

A0A5A7UNA3 Reverse transcriptase0.0e+0051Show/hide
Query:  DKTVEIELPVPDTLPTSAES------------FISSSSSTLQEGQRVSLEEDDVHWLHAIFRAKLAGGCCSPPSDYRKRTGCHKSHVTTYQQTTQAESG-
        D  VEI+ PVPD LP                   SSS  + ++ +++ ++++ V  LHAIFR+K+AG    PP   R+R           Q  +  ES  
Subjt:  DKTVEIELPVPDTLPTSAES------------FISSSSSTLQEGQRVSLEEDDVHWLHAIFRAKLAGGCCSPPSDYRKRTGCHKSHVTTYQQTTQAESG-

Query:  --------------QDAEIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRR
                         EIGR +RA PSDP+K YGIERLKKLGAT+F+GSTDPADAE WLN+LEKCFDVM+CPEERKV+LATFLLQKEAEGWWKSI+ RR
Subjt:  --------------QDAEIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRR

Query:  SDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGL
        SDAR LDWQTFRGIFE+KYYP+TYCEAKRDEFL LKQG                           L + ++ R    L     V+     +R  RFERGL
Subjt:  SDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGL

Query:  RFEIRTLVTAIAKWTNFSQLVETALHVEQSIIEEKMAL--------------------------------------------------------------
        RFEIRT VTAIAKWTNFSQLVETAL VEQSI EEK A+                                                              
Subjt:  RFEIRTLVTAIAKWTNFSQLVETALHVEQSIIEEKMAL--------------------------------------------------------------

Query:  --------------------------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA-------------
                                                                      DQGV S T+EQ +      EGTSGA             
Subjt:  --------------------------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA-------------

Query:  --------------------------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQAL
                                                          RMLEPLSE L I TPVGDVLLV EVLR+CEV+VEG+ +LVDLLPLELQ L
Subjt:  --------------------------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQAL

Query:  DVILGIDFLFTHYASMDCHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPD
        DVILG+DFLF HYASMDCH K++ F+KPG  E VFRG RK +  SLIS LKAEKLLRKGCT FL H+V VQ EKLKPEDVPVV E+LDVFP DLSGLPPD
Subjt:  DVILGIDFLFTHYASMDCHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPD

Query:  REVEFTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH--------------------
        RE+EFTIELLPGT PISQAPYRMAPSELK+LK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI                     
Subjt:  REVEFTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH--------------------

Query:  -------------------------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAK
                                                                     QFVIVFIDDILVYS+DR++HEEHLRIVLQTLR+KQLYAK
Subjt:  -------------------------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAK

Query:  FSKCEFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSP
        FSKCEFWL QVVFLGHVVSA  VS+DPQKVEAVVNWERP  ATE                                           SFQELKKRLVT+P
Subjt:  FSKCEFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSP

Query:  ILTLPVTGKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF-------------------------------
        IL LPVTGK+YVIYCDASR GLG VLMQ+  VIAYASRQLK+HECNY  HDLE+  VVLALKIWRHYLF                               
Subjt:  ILTLPVTGKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF-------------------------------

Query:  -------------GKANVVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFE
                     GKANVVA ALSRKSRL KSALCGIR +L                            L+ EIVRRQ EDSN QK   KSKKG E EFE
Subjt:  -------------GKANVVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFE

Query:  LRADGAIVKEGRLCVPNISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMN
        LR DGAIVK+GRLCVPNISELK AILEE HSSAYAMHP STKMYRTLKKTYWWSGMK++IAEYVDRCLICQQVKPVRQRPGG LNPLPVPEWKWEHITM+
Subjt:  LRADGAIVKEGRLCVPNISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMN

Query:  FLFG
        FLFG
Subjt:  FLFG

A0A5D3BHI1 Reverse transcriptase0.0e+0053.5Show/hide
Query:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE
        EIGR +RA PSDP+K YGIERLKKLGAT+F+GSTDPADAE WLN+LEKCFDVM+CPEERKV+LATFLLQKEAEGWWKSI+ RRSDAR LDWQTFRGIFE+
Subjt:  EIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGRRSDARTLDWQTFRGIFEE

Query:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF
        KYYP+TYCEAKRDEFL LKQG                           L + ++ R    L     V+     +R  RFERGLRFEIRT VTAIAKWTNF
Subjt:  KYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVL-----ERKLRFERGLRFEIRTLVTAIAKWTNF

Query:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------
        SQLVETAL VEQSI EEK A+                                                                               
Subjt:  SQLVETALHVEQSIIEEKMAL-------------------------------------------------------------------------------

Query:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------
                                                     DQGV S T+EQ +      EGTSGA                              
Subjt:  ---------------------------------------------DQGVESHTVEQPKFLAGAGEGTSGA------------------------------

Query:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD
                                         RMLEPLSE L I TPVGDVLLV EVLR+CEV+VEG+ +LVDLLPLELQ LDVILG+DFLF HYASMD
Subjt:  ---------------------------------RMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFTHYASMD

Query:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS
        CH K++ F+KPG  E VFRG RK +  SLIS LKAEKLLRKGCT FL H+V VQ EKLKPEDVPVV E+LDVFP DLSGLPPDRE+EFTIELLPGT PIS
Subjt:  CHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPIS

Query:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------
        QAPYRMAPSELK+LK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI                                      
Subjt:  QAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIH-------------------------------------

Query:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV
                                                    QFVIVFIDDILVYS+DR++HEEHLRIVLQTLR+KQLYAKFSKCEFWL QVVFLGHV
Subjt:  --------------------------------------------QFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHV

Query:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA
        VSA  VS+DPQKVEAVVNWERP  ATE                                           SFQELKKRLVT+PIL LPVTGK+YVIYCDA
Subjt:  VSADEVSIDPQKVEAVVNWERPARATE-------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDA

Query:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN
        SR GLG VLMQ+  VIAYASRQLK+HECNY  HDLE+  VVLALKIWRHYLF                                            GKAN
Subjt:  SRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLF--------------------------------------------GKAN

Query:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN
        VVA ALSRKSRL KSALCGIR +L                            L+ EIVRRQ EDSN QK   KSKKG E EFELR DGAIVK+GRLCVPN
Subjt:  VVAVALSRKSRLLKSALCGIRASL----------------------------LLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPN

Query:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG
        ISELK AILEE HSSAYAMHP STKMYRTLKKTYWWSGMK++IAEYVDRCLICQQVKPVRQRPGG LNPLPVPEWKWEHITM+FLFG
Subjt:  ISELKGAILEETHSSAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFG

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.63.7e-2123.5Show/hide
Query:  KKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGT-----LRLCIDYRQLNKVTI-------------------------------HQF----------
        ++++ Q+Q+++++G IR S SP+ +P+  V KK         R+ IDYR+LN++T+                               HQ           
Subjt:  KKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGT-----LRLCIDYRQLNKVTI-------------------------------HQF----------

Query:  ----------------------------------------VIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADEV
                                                 +V++DDI+V+S     H + L +V + L    L  +  KCEF   +  FLGHV++ D +
Subjt:  ----------------------------------------VIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADEV

Query:  SIDPQKVEAVVNWERPARATE--------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDASRQGL
          +P+K+EA+  +  P +  E                                            +F++LK  +   PIL +P   K++ +  DAS   L
Subjt:  SIDPQKVEAVVNWERPARATE--------------------------------------------SFQELKKRLVTSPILTLPVTGKEYVIYCDASRQGL

Query:  GYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLFGK
        G VL Q+   ++Y SR L +HE NY   + E+  +V A K +RHYL G+
Subjt:  GYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLFGK

P20825 Retrovirus-related Pol polyprotein from transposon 2971.8e-2324.66Show/hide
Query:  TPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKD-----GTLRLCIDYRQLNKVTI-----------------------------
        +PI    Y +A +   +++ Q+QE++++G IR S SP+ +P   V KK         R+ IDYR+LN++TI                             
Subjt:  TPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKD-----GTLRLCIDYRQLNKVTI-----------------------------

Query:  --HQF--------------------------------------------------VIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWL
          HQ                                                    +V++DDI+++S     H   +++V   L D  L  +  KCEF  
Subjt:  --HQF--------------------------------------------------VIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWL

Query:  NQVVFLGHVVSADEVSIDPQKVEAVVNWERPAR--------------------------------------------ATESFQELKKRLVTSPILTLPVT
         +  FLGH+V+ D +  +P KV+A+V++  P +                                              E+F++LK  ++  PIL LP  
Subjt:  NQVVFLGHVVSADEVSIDPQKVEAVVNWERPAR--------------------------------------------ATESFQELKKRLVTSPILTLPVT

Query:  GKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLFGKANVVA
         K++V+  DAS   LG VL Q    I++ SR L  HE NY   + E+  +V A K +RHYL G+  ++A
Subjt:  GKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWRHYLFGKANVVA

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein4.3e-3023.76Show/hide
Query:  VVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI--
        ++   L   P D++ +P    V+  IE+ PG       PY +     +++   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DYR LNK TI  
Subjt:  VVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI--

Query:  -----------------------------HQ------------------------------------------------FVIVFIDDILVYSIDRKAHEE
                                     HQ                                                FV V++DDIL++S   + H +
Subjt:  -----------------------------HQ------------------------------------------------FVIVFIDDILVYSIDRKAHEE

Query:  HLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERP-----------------------------------------ARA
        HL  VL+ L+++ L  K  KC+F   +  FLG+ +   +++    K  A+ ++  P                                          + 
Subjt:  HLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERP-----------------------------------------ARA

Query:  TESFQELKKRLVTSPILTLPVTGK-EYVIYCDASRQGLGYVLMQ-ERK-----VIAYASRQLKKHECNYLIHDLEITTVVLALKIWRH------------
         ++ ++LK  L  SP+L +P   K  Y +  DAS+ G+G VL + + K     V+ Y S+ L+  + NY   +LE+  ++ AL  +R+            
Subjt:  TESFQELKKRLVTSPILTLPVTGK-EYVIYCDASRQGLGYVLMQ-ERK-----VIAYASRQLKKHECNYLIHDLEITTVVLALKIWRH------------

Query:  --------------------------------YLFGKANVVAVALSR------------------KSRLLKSALCGIRASLLLAEIVRRQ--PED----S
                                        YL G  NVVA A+SR                  KS      LC     + + E+ +    PED     
Subjt:  --------------------------------YLFGKANVVAVALSR------------------KSRLLKSALCGIRASLLLAEIVRRQ--PED----S

Query:  NFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPNISELKGAILEETHS-SAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPG
        ++QK L  S+      + L  D  I  + RL VP   + + A++   H  + +  H   T     +   Y+W  ++  I +Y+  C+ CQ +K  R R  
Subjt:  NFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPNISELKGAILEETHS-SAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPG

Query:  GLLNPLPVPEWKWEHITMNFLFG
        GLL PLP+ E +W  I+M+F+ G
Subjt:  GLLNPLPVPEWKWEHITMNFLFG

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus6.5e-1823.73Show/hide
Query:  VVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKK-----DGTLRLCIDYRQLNK
        ++ E+  +F   LSG+  +  V+  I       PI    Y    +   +++ Q+ EL+  G IRPS SP+ +P+  V KK     +   R+ +D+++LN 
Subjt:  VVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKK-----DGTLRLCIDYRQLNK

Query:  VTI-------------------------------HQF--------------------------------------------------VIVFIDDILVYSI
        VTI                               HQ                                                     V+IDDI+V+S 
Subjt:  VTI-------------------------------HQF--------------------------------------------------VIVFIDDILVYSI

Query:  DRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERPA------------------------------------
        D   H ++LR+VL +L    L     K  F   QV FLG++V+AD +  DP+KV A+     P                                     
Subjt:  DRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERPA------------------------------------

Query:  ------------------RATESFQELKKRLVTSPILTLPVTGKEYVIYCDASRQGLGYVLMQE----RKVIAYASRQLKKHECNYLIHDLEITTVVLAL
                           A +SF +LK  L +S IL  P   K + +  DAS   +G VL Q+     + IAY SR L K E NY   + E+  ++ +L
Subjt:  ------------------RATESFQELKKRLVTSPILTLPVTGKEYVIYCDASRQGLGYVLMQE----RKVIAYASRQLKKHECNYLIHDLEITTVVLAL

Query:  KIWRHYLFGKANV
           R YL+G   +
Subjt:  KIWRHYLFGKANV

Q99315 Transposon Ty3-G Gag-Pol polyprotein7.4e-3023.76Show/hide
Query:  VVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI--
        ++   L   P D++ +P    V+  IE+ PG       PY +     +++   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DYR LNK TI  
Subjt:  VVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPISQAPYRMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTI--

Query:  -----------------------------HQ------------------------------------------------FVIVFIDDILVYSIDRKAHEE
                                     HQ                                                FV V++DDIL++S   + H +
Subjt:  -----------------------------HQ------------------------------------------------FVIVFIDDILVYSIDRKAHEE

Query:  HLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERP-----------------------------------------ARA
        HL  VL+ L+++ L  K  KC+F   +  FLG+ +   +++    K  A+ ++  P                                          + 
Subjt:  HLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLGHVVSADEVSIDPQKVEAVVNWERP-----------------------------------------ARA

Query:  TESFQELKKRLVTSPILTLPVTGK-EYVIYCDASRQGLGYVLMQ-ERK-----VIAYASRQLKKHECNYLIHDLEITTVVLALKIWRH------------
         ++  +LK  L  SP+L +P   K  Y +  DAS+ G+G VL + + K     V+ Y S+ L+  + NY   +LE+  ++ AL  +R+            
Subjt:  TESFQELKKRLVTSPILTLPVTGK-EYVIYCDASRQGLGYVLMQ-ERK-----VIAYASRQLKKHECNYLIHDLEITTVVLALKIWRH------------

Query:  --------------------------------YLFGKANVVAVALSR------------------KSRLLKSALCGIRASLLLAEIVRRQ--PED----S
                                        YL G  NVVA A+SR                  KS      LC     + + E+ +    PED     
Subjt:  --------------------------------YLFGKANVVAVALSR------------------KSRLLKSALCGIRASLLLAEIVRRQ--PED----S

Query:  NFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPNISELKGAILEETHS-SAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPG
        ++QK L  S+      + L  D  I  + RL VP   + + A++   H  + +  H   T     +   Y+W  ++  I +Y+  C+ CQ +K  R R  
Subjt:  NFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPNISELKGAILEETHS-SAYAMHPASTKMYRTLKKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPG

Query:  GLLNPLPVPEWKWEHITMNFLFG
        GLL PLP+ E +W  I+M+F+ G
Subjt:  GLLNPLPVPEWKWEHITMNFLFG

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein8.2e-0844.44Show/hide
Query:  HLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLG--HVVSADEVSIDPQKVEAVVNWERPARATE
        HL +VLQ     Q YA   KC F   Q+ +LG  H++S + VS DP K+EA+V W  P   TE
Subjt:  HLRIVLQTLRDKQLYAKFSKCEFWLNQVVFLG--HVVSADEVSIDPQKVEAVVNWERPARATE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCGACGAAGAGACTTAGAGTTCTAGGTTGGAGATCAGGTTTTCTTAAAGTTATCCCCATGGAGAGGTGTTCTTCGCTTCGGGAGGAAAGAGGAATCGGTTCAGA
TCCTCGACAGGAAGGAGCAAGTTTTGAGGAACAAAACGATCCCACTCGTGAAAGTTCTTTGGAGACATCATGGAGTAGAGGAGGCAACCTGGGAGTCAGAAGATCAGATG
AGGAGGAGTTACCCGACACTCTTCACCTAAGGACTTCTAAATTTGGAGGACGAAATTTCAAAAGGGGGAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGT
TCTCTGATGTTTTGTGCATTCCGGGGTGTTCCAGTCAAATCAGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTCCTACAACTGTCATGAAGATTTTGCCTAT
AGGAAATAGGTCGATTCTACAAACTGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTACCTGATACACTGCCAACATCTGCTGAAAGTTTCATATCAAGCTCCA
GTTCAACGTTACAGGAGGGTCAACGAGTATCGTTAGAGGAGGACGATGTTCATTGGCTTCACGCCATCTTCCGGGCTAAGCTAGCAGGTGGTTGTTGCTCACCGCCGAGC
GATTACCGTAAGCGCACGGGTTGTCACAAGAGTCATGTCACCACGTACCAGCAGACGACGCAGGCAGAATCAGGACAGGACGCAGAGATCGGTAGGCCAGAGAGAGCAGG
GCCTAGTGATCCGAAAAAGATGTATGGGATTGAACGTTTGAAGAAGTTAGGAGCCACAATGTTTGATGGTTCCACAGATCCAGCTGACGCCGAGGTCTGGTTAAATATTT
TGGAGAAATGCTTCGACGTGATGAGTTGTCCTGAGGAGCGAAAAGTCAAATTAGCCACATTCCTTTTGCAGAAAGAGGCGGAGGGATGGTGGAAGTCCATTATAGGCAGG
CGCAGTGATGCACGTACGTTAGATTGGCAGACATTCAGAGGCATATTCGAGGAAAAGTACTATCCCACCACATATTGTGAGGCAAAGAGAGATGAGTTTCTGGAGTTGAA
GCAAGGCCTTGAATTGCTCTGTTTTTCCTCTGTTTACGGCTCCAAGAAGTCCCAAAATTGGTTCCCCCAAAAACCTAGCCGAAAAGAACTATTTATTCTGAAATTTCATC
GTAGCGTCGAGACGCTGCCTCTAAACACACGCGTTCTGGAAAGGAAATTACGGTTTGAGAGAGGGTTGCGTTTTGAGATACGTACCCTAGTTACCGCTATTGCCAAGTGG
ACGAATTTTTCCCAGCTAGTAGAGACTGCCTTACATGTGGAGCAGAGTATTATAGAGGAAAAGATGGCATTGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAGCCTAA
ATTCTTAGCAGGCGCTGGAGAGGGCACCAGTGGTGCAAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATGCACTCCAGTTGGTGACGTTTTATTAGTCAAAGAAG
TGTTGCGTGATTGTGAGGTTGTAGTAGAAGGTCTCTGTATGCTAGTGGATCTTCTTCCCCTAGAGTTGCAGGCGTTGGATGTGATTTTGGGAATAGATTTCTTATTCACT
CACTATGCTTCTATGGATTGCCATACGAAGAAAATGACTTTTAAGAAACCAGGTTTGACTGAAGCAGTTTTCAGAGGTGAGAGGAAAATTATTCCTACGAGTTTGATTTC
AGCTCTGAAAGCTGAGAAGTTGTTGAGGAAAGGTTGCACAACGTTTCTTGTGCACGTGGTTGAGGTGCAAGAAGAAAAGCTGAAACCAGAAGATGTTCCTGTGGTGAATG
AATATCTTGATGTTTTTCCAACTGATCTATCGGGTTTGCCGCCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAACAACACCTATTTCACAGGCACCATAC
AGGATGGCTCCGAGCGAGCTTAAGAAGCTAAAGGTGCAGTTGCAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTATCACCTTGGGGAGCTCCAGTGTTATTCGT
GAAGAAGAAAGATGGTACCCTAAGATTATGCATTGATTACAGGCAGTTAAACAAGGTCACGATACATCAGTTTGTGATAGTGTTCATCGACGACATACTAGTTTACTCAA
TTGACAGGAAAGCCCATGAGGAACATCTAAGGATTGTTTTACAGACACTACGTGATAAACAGCTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGAATCAAGTGGTG
TTCTTAGGGCATGTGGTTTCAGCGGACGAAGTTAGTATTGATCCCCAGAAAGTGGAAGCTGTTGTCAACTGGGAGAGACCAGCTAGAGCAACAGAGAGTTTCCAGGAGCT
GAAGAAGAGATTGGTGACATCACCTATTCTGACACTTCCTGTAACAGGGAAGGAGTATGTGATCTATTGTGATGCTTCGAGGCAAGGATTAGGTTACGTGCTGATGCAGG
AAAGAAAGGTAATAGCTTATGCTTCAAGGCAGTTGAAGAAGCATGAGTGTAATTACCTTATCCATGATCTTGAGATAACAACAGTTGTTTTAGCACTGAAGATCTGGAGA
CATTATTTATTCGGTAAGGCTAACGTGGTAGCAGTTGCGTTAAGTAGGAAGTCGAGACTTCTGAAGAGTGCCTTGTGTGGTATTCGAGCAAGCTTGCTACTAGCAGAGAT
TGTGAGAAGGCAGCCAGAGGACAGTAATTTTCAGAAGATGCTTGCAAAGTCCAAGAAAGGCCCAGAGGCAGAATTTGAGTTGAGAGCGGACGGAGCCATAGTTAAGGAGG
GAAGACTATGCGTTCCGAATATTAGTGAGCTTAAGGGTGCTATACTAGAGGAAACTCATAGTTCAGCTTACGCTATGCATCCAGCAAGCACCAAGATGTACAGAACTCTG
AAGAAAACTTATTGGTGGTCTGGTATGAAGCGGAAGATAGCTGAATATGTCGATAGATGTTTGATCTGTCAGCAGGTTAAACCAGTGAGACAGAGGCCAGGAGGACTCCT
TAATCCACTGCCAGTGCCAGAGTGGAAGTGGGAACATATTACCATGAATTTTCTGTTTGGATTTGTTAGCTTTACGAGCTTCAATCATACTATGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCGACGAAGAGACTTAGAGTTCTAGGTTGGAGATCAGGTTTTCTTAAAGTTATCCCCATGGAGAGGTGTTCTTCGCTTCGGGAGGAAAGAGGAATCGGTTCAGA
TCCTCGACAGGAAGGAGCAAGTTTTGAGGAACAAAACGATCCCACTCGTGAAAGTTCTTTGGAGACATCATGGAGTAGAGGAGGCAACCTGGGAGTCAGAAGATCAGATG
AGGAGGAGTTACCCGACACTCTTCACCTAAGGACTTCTAAATTTGGAGGACGAAATTTCAAAAGGGGGAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGT
TCTCTGATGTTTTGTGCATTCCGGGGTGTTCCAGTCAAATCAGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTCCTACAACTGTCATGAAGATTTTGCCTAT
AGGAAATAGGTCGATTCTACAAACTGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTACCTGATACACTGCCAACATCTGCTGAAAGTTTCATATCAAGCTCCA
GTTCAACGTTACAGGAGGGTCAACGAGTATCGTTAGAGGAGGACGATGTTCATTGGCTTCACGCCATCTTCCGGGCTAAGCTAGCAGGTGGTTGTTGCTCACCGCCGAGC
GATTACCGTAAGCGCACGGGTTGTCACAAGAGTCATGTCACCACGTACCAGCAGACGACGCAGGCAGAATCAGGACAGGACGCAGAGATCGGTAGGCCAGAGAGAGCAGG
GCCTAGTGATCCGAAAAAGATGTATGGGATTGAACGTTTGAAGAAGTTAGGAGCCACAATGTTTGATGGTTCCACAGATCCAGCTGACGCCGAGGTCTGGTTAAATATTT
TGGAGAAATGCTTCGACGTGATGAGTTGTCCTGAGGAGCGAAAAGTCAAATTAGCCACATTCCTTTTGCAGAAAGAGGCGGAGGGATGGTGGAAGTCCATTATAGGCAGG
CGCAGTGATGCACGTACGTTAGATTGGCAGACATTCAGAGGCATATTCGAGGAAAAGTACTATCCCACCACATATTGTGAGGCAAAGAGAGATGAGTTTCTGGAGTTGAA
GCAAGGCCTTGAATTGCTCTGTTTTTCCTCTGTTTACGGCTCCAAGAAGTCCCAAAATTGGTTCCCCCAAAAACCTAGCCGAAAAGAACTATTTATTCTGAAATTTCATC
GTAGCGTCGAGACGCTGCCTCTAAACACACGCGTTCTGGAAAGGAAATTACGGTTTGAGAGAGGGTTGCGTTTTGAGATACGTACCCTAGTTACCGCTATTGCCAAGTGG
ACGAATTTTTCCCAGCTAGTAGAGACTGCCTTACATGTGGAGCAGAGTATTATAGAGGAAAAGATGGCATTGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAGCCTAA
ATTCTTAGCAGGCGCTGGAGAGGGCACCAGTGGTGCAAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATGCACTCCAGTTGGTGACGTTTTATTAGTCAAAGAAG
TGTTGCGTGATTGTGAGGTTGTAGTAGAAGGTCTCTGTATGCTAGTGGATCTTCTTCCCCTAGAGTTGCAGGCGTTGGATGTGATTTTGGGAATAGATTTCTTATTCACT
CACTATGCTTCTATGGATTGCCATACGAAGAAAATGACTTTTAAGAAACCAGGTTTGACTGAAGCAGTTTTCAGAGGTGAGAGGAAAATTATTCCTACGAGTTTGATTTC
AGCTCTGAAAGCTGAGAAGTTGTTGAGGAAAGGTTGCACAACGTTTCTTGTGCACGTGGTTGAGGTGCAAGAAGAAAAGCTGAAACCAGAAGATGTTCCTGTGGTGAATG
AATATCTTGATGTTTTTCCAACTGATCTATCGGGTTTGCCGCCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAACAACACCTATTTCACAGGCACCATAC
AGGATGGCTCCGAGCGAGCTTAAGAAGCTAAAGGTGCAGTTGCAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTATCACCTTGGGGAGCTCCAGTGTTATTCGT
GAAGAAGAAAGATGGTACCCTAAGATTATGCATTGATTACAGGCAGTTAAACAAGGTCACGATACATCAGTTTGTGATAGTGTTCATCGACGACATACTAGTTTACTCAA
TTGACAGGAAAGCCCATGAGGAACATCTAAGGATTGTTTTACAGACACTACGTGATAAACAGCTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGAATCAAGTGGTG
TTCTTAGGGCATGTGGTTTCAGCGGACGAAGTTAGTATTGATCCCCAGAAAGTGGAAGCTGTTGTCAACTGGGAGAGACCAGCTAGAGCAACAGAGAGTTTCCAGGAGCT
GAAGAAGAGATTGGTGACATCACCTATTCTGACACTTCCTGTAACAGGGAAGGAGTATGTGATCTATTGTGATGCTTCGAGGCAAGGATTAGGTTACGTGCTGATGCAGG
AAAGAAAGGTAATAGCTTATGCTTCAAGGCAGTTGAAGAAGCATGAGTGTAATTACCTTATCCATGATCTTGAGATAACAACAGTTGTTTTAGCACTGAAGATCTGGAGA
CATTATTTATTCGGTAAGGCTAACGTGGTAGCAGTTGCGTTAAGTAGGAAGTCGAGACTTCTGAAGAGTGCCTTGTGTGGTATTCGAGCAAGCTTGCTACTAGCAGAGAT
TGTGAGAAGGCAGCCAGAGGACAGTAATTTTCAGAAGATGCTTGCAAAGTCCAAGAAAGGCCCAGAGGCAGAATTTGAGTTGAGAGCGGACGGAGCCATAGTTAAGGAGG
GAAGACTATGCGTTCCGAATATTAGTGAGCTTAAGGGTGCTATACTAGAGGAAACTCATAGTTCAGCTTACGCTATGCATCCAGCAAGCACCAAGATGTACAGAACTCTG
AAGAAAACTTATTGGTGGTCTGGTATGAAGCGGAAGATAGCTGAATATGTCGATAGATGTTTGATCTGTCAGCAGGTTAAACCAGTGAGACAGAGGCCAGGAGGACTCCT
TAATCCACTGCCAGTGCCAGAGTGGAAGTGGGAACATATTACCATGAATTTTCTGTTTGGATTTGTTAGCTTTACGAGCTTCAATCATACTATGTTTTGA
Protein sequenceShow/hide protein sequence
MQATKRLRVLGWRSGFLKVIPMERCSSLREERGIGSDPRQEGASFEEQNDPTRESSLETSWSRGGNLGVRRSDEEELPDTLHLRTSKFGGRNFKRGRAQDFRANQEDLWC
SLMFCAFRGVPVKSEALFGMVGKLIQFPTTVMKILPIGNRSILQTGELDKTVEIELPVPDTLPTSAESFISSSSSTLQEGQRVSLEEDDVHWLHAIFRAKLAGGCCSPPS
DYRKRTGCHKSHVTTYQQTTQAESGQDAEIGRPERAGPSDPKKMYGIERLKKLGATMFDGSTDPADAEVWLNILEKCFDVMSCPEERKVKLATFLLQKEAEGWWKSIIGR
RSDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGLELLCFSSVYGSKKSQNWFPQKPSRKELFILKFHRSVETLPLNTRVLERKLRFERGLRFEIRTLVTAIAKW
TNFSQLVETALHVEQSIIEEKMALDQGVESHTVEQPKFLAGAGEGTSGARMLEPLSEELVICTPVGDVLLVKEVLRDCEVVVEGLCMLVDLLPLELQALDVILGIDFLFT
HYASMDCHTKKMTFKKPGLTEAVFRGERKIIPTSLISALKAEKLLRKGCTTFLVHVVEVQEEKLKPEDVPVVNEYLDVFPTDLSGLPPDREVEFTIELLPGTTPISQAPY
RMAPSELKKLKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIHQFVIVFIDDILVYSIDRKAHEEHLRIVLQTLRDKQLYAKFSKCEFWLNQVV
FLGHVVSADEVSIDPQKVEAVVNWERPARATESFQELKKRLVTSPILTLPVTGKEYVIYCDASRQGLGYVLMQERKVIAYASRQLKKHECNYLIHDLEITTVVLALKIWR
HYLFGKANVVAVALSRKSRLLKSALCGIRASLLLAEIVRRQPEDSNFQKMLAKSKKGPEAEFELRADGAIVKEGRLCVPNISELKGAILEETHSSAYAMHPASTKMYRTL
KKTYWWSGMKRKIAEYVDRCLICQQVKPVRQRPGGLLNPLPVPEWKWEHITMNFLFGFVSFTSFNHTMF