; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028155 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028155
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr8:14666216..14666981
RNA-Seq ExpressionLag0028155
SyntenyLag0028155
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.3e-0834.57Show/hide
Query:  ARDWWRSILSRRSDTEGMAWQEFKR--------------YATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSF--KPRHRGSA
        A DWW    SRR  T  M W EFK+                  VI D+++RCK+FE+GLR EIRT VTA  +  +F  LV  A+R   S   + R R ++
Subjt:  ARDWWRSILSRRSDTEGMAWQEFKR--------------YATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSF--KPRHRGSA

Query:  RTDSSFSQSA-SSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSK--------LWQASSGAVS
        +   +FS S   +  G+ R    V    S+GN      G S+SK         W  SS  +S
Subjt:  RTDSSFSQSA-SSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSK--------LWQASSGAVS

KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.5e-0937.24Show/hide
Query:  DWWRSILSRR---SDTEGMA-------WQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSFKPRHR-----GSARTD
        DWWR   SRR   SD   M        + E  +YAT VI DE++RCK+FE+GL+ EIRT VT   +  +F  LVE A+R   S   R R      + RT 
Subjt:  DWWRSILSRR---SDTEGMA-------WQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSFKPRHR-----GSARTD

Query:  SSFSQSASSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSKLWQAS
        SS       G G  R   +     S G  + A++ R  SK  ++S
Subjt:  SSFSQSASSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSKLWQAS

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.8e-1039.42Show/hide
Query:  ARDWWRSILSRRSDTEGMA-------WQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSF--KPRHRGSARTDSSFS
        A DWWR   SRR  T  M        + E  +YAT VI DE +RCK+FE+GLR EIRT VTA  +  +F  LVE+A+R   S   + R R +++   +FS
Subjt:  ARDWWRSILSRRSDTEGMA-------WQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSF--KPRHRGSARTDSSFS

Query:  QSA-SSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSK
         S   +  G+ R    V +  S+G+     +G S+SK
Subjt:  QSA-SSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSK

TYK27278.1 uncharacterized protein E5676_scaffold244G00450 [Cucumis melo var. makuwa]8.3e-0838.2Show/hide
Query:  RRQEGIISYVSPTRAARDWWRSILSRRSDTEG---MAWQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMR
        +R++G+ +++   + A  WW+S+L+RR+D  G     + E  RYA  +++ + DRC++FE GLR EIRT VT   +   F  LVE  +R
Subjt:  RRQEGIISYVSPTRAARDWWRSILSRRSDTEG---MAWQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMR

XP_038896366.1 uncharacterized protein LOC120084630 [Benincasa hispida]2.4e-0728.3Show/hide
Query:  ILKWIKGYGVPRRQEGIISYVSPTRAARDWWRSILSRRSDTEGMAWQEFK-----------------------------------------RYATNVISD
        I K+ +    P+ ++  ++     + A DWW+ + +RR + E + W+EF+                                         +YA N++ D
Subjt:  ILKWIKGYGVPRRQEGIISYVSPTRAARDWWRSILSRRSDTEGMAWQEFK-----------------------------------------RYATNVISD

Query:  EIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSFKPRHRGSARTDSSFSQ
        E +RC++FE GLR EIRT VTA+ E  EF  L+E+ MR   S         R DSS S+
Subjt:  EIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSFKPRHRGSARTDSSFSQ

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein4.0e-0834.57Show/hide
Query:  ARDWWRSILSRRSDTEGMAWQEFKR--------------YATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSF--KPRHRGSA
        A DWW    SRR  T  M W EFK+                  VI D+++RCK+FE+GLR EIRT VTA  +  +F  LV  A+R   S   + R R ++
Subjt:  ARDWWRSILSRRSDTEGMAWQEFKR--------------YATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSF--KPRHRGSA

Query:  RTDSSFSQSA-SSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSK--------LWQASSGAVS
        +   +FS S   +  G+ R    V    S+GN      G S+SK         W  SS  +S
Subjt:  RTDSSFSQSA-SSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSK--------LWQASSGAVS

A0A5A7T1M0 Reverse transcriptase3.3e-1039.42Show/hide
Query:  ARDWWRSILSRRSDTEGMA-------WQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSF--KPRHRGSARTDSSFS
        A DWWR   SRR  T  M        + E  +YAT VI DE +RCK+FE+GLR EIRT VTA  +  +F  LVE+A+R   S   + R R +++   +FS
Subjt:  ARDWWRSILSRRSDTEGMA-------WQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSF--KPRHRGSARTDSSFS

Query:  QSA-SSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSK
         S   +  G+ R    V +  S+G+     +G S+SK
Subjt:  QSA-SSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSK

A0A5A7UZM6 Gag protease polyprotein-like protein3.4e-0737.9Show/hide
Query:  WQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSFKPR--HRGSARTDSSFSQSA-SSGSGRLRDPLAVSKHHSQGNQ
        + E   YAT VI DE++RCK+FE+GLR EIRT VTA  +  +F  LVE A+R   S   R   R +++   +FS S   +  G+ R    V    S+GN 
Subjt:  WQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSFKPR--HRGSARTDSSFSQSA-SSGSGRLRDPLAVSKHHSQGNQ

Query:  HPAKAGRSWSKLWQASSGAVSMGN
             G S+SK   +     S G+
Subjt:  HPAKAGRSWSKLWQASSGAVSMGN

A0A5D3DES5 DNA/RNA polymerases superfamily protein3.6e-0937.24Show/hide
Query:  DWWRSILSRR---SDTEGMA-------WQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSFKPRHR-----GSARTD
        DWWR   SRR   SD   M        + E  +YAT VI DE++RCK+FE+GL+ EIRT VT   +  +F  LVE A+R   S   R R      + RT 
Subjt:  DWWRSILSRR---SDTEGMA-------WQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSFKPRHR-----GSARTD

Query:  SSFSQSASSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSKLWQAS
        SS       G G  R   +     S G  + A++ R  SK  ++S
Subjt:  SSFSQSASSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSKLWQAS

A0A5D3DUV6 Uncharacterized protein4.0e-0838.2Show/hide
Query:  RRQEGIISYVSPTRAARDWWRSILSRRSDTEG---MAWQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMR
        +R++G+ +++   + A  WW+S+L+RR+D  G     + E  RYA  +++ + DRC++FE GLR EIRT VT   +   F  LVE  +R
Subjt:  RRQEGIISYVSPTRAARDWWRSILSRRSDTEG---MAWQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGCAGTGGATGGATAATATTGAAATGGATTAAAGGTTATGGGGTGCCCAGAAGACAAGAAGGTATCATTAGCTACGTATCTCCTACAAGAGCAGCTCGAGATTG
GTGGAGGTCAATCTTGAGTAGACGATCAGACACTGAAGGAATGGCTTGGCAAGAGTTTAAGAGGTACGCTACAAATGTGATCAGTGATGAGATCGATAGATGCAAGCAGT
TTGAAGACGGTCTTCGAGGTGAAATTCGAACTCATGTTACTGCCAGCATAGAAAGGAAGGAGTTTGGAACATTGGTGGAACTTGCCATGAGGGGGCATGGAAGTTTTAAA
CCGAGGCATCGTGGTTCAGCGAGAACAGATTCCAGTTTCAGCCAGTCTGCTAGTAGTGGATCGGGCCGTCTTCGCGATCCTCTAGCGGTCAGCAAGCATCACAGTCAGGG
GAACCAGCATCCAGCCAAAGCAGGGCGTAGCTGGTCAAAATTGTGGCAAGCATCATCAGGGGCAGTGTCTATGGGGAACCCGAGTTTGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGCAGTGGATGGATAATATTGAAATGGATTAAAGGTTATGGGGTGCCCAGAAGACAAGAAGGTATCATTAGCTACGTATCTCCTACAAGAGCAGCTCGAGATTG
GTGGAGGTCAATCTTGAGTAGACGATCAGACACTGAAGGAATGGCTTGGCAAGAGTTTAAGAGGTACGCTACAAATGTGATCAGTGATGAGATCGATAGATGCAAGCAGT
TTGAAGACGGTCTTCGAGGTGAAATTCGAACTCATGTTACTGCCAGCATAGAAAGGAAGGAGTTTGGAACATTGGTGGAACTTGCCATGAGGGGGCATGGAAGTTTTAAA
CCGAGGCATCGTGGTTCAGCGAGAACAGATTCCAGTTTCAGCCAGTCTGCTAGTAGTGGATCGGGCCGTCTTCGCGATCCTCTAGCGGTCAGCAAGCATCACAGTCAGGG
GAACCAGCATCCAGCCAAAGCAGGGCGTAGCTGGTCAAAATTGTGGCAAGCATCATCAGGGGCAGTGTCTATGGGGAACCCGAGTTTGTTATAA
Protein sequenceShow/hide protein sequence
MQSSGWIILKWIKGYGVPRRQEGIISYVSPTRAARDWWRSILSRRSDTEGMAWQEFKRYATNVISDEIDRCKQFEDGLRGEIRTHVTASIERKEFGTLVELAMRGHGSFK
PRHRGSARTDSSFSQSASSGSGRLRDPLAVSKHHSQGNQHPAKAGRSWSKLWQASSGAVSMGNPSLL