; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028163 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028163
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr8:14784685..14785606
RNA-Seq ExpressionLag0028163
SyntenyLag0028163
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]1.1e-4845Show/hide
Query:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLKLEFAD
        E++++   +R K +YC FH DH H T++C  L++++E LI+ GYLKE++       +A + ++ RQ  K              +Y   ++E   K+EF +
Subjt:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLKLEFAD

Query:  KEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCV
         EV  I H HNDALV+ L I NAKVH IL+DGGSS D+ S  A+  M LG   L+ S   LVGFGGE V P G +ELPVTFG G +++T+MV+FLVVD  
Subjt:  KEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCV

Query:  PAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE
         + NAILGR T+H LKA+ S YHQ +KF    G+G +  E
Subjt:  PAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]1.4e-4844.17Show/hide
Query:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLKLEFAD
        E++++   +R+K +YC+FH DHDH T++C  L++++E LIR GYLKE    ++ +     AR  R++ +              +Y   + +  + +EF++
Subjt:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLKLEFAD

Query:  KEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCV
         E   + H HNDALV+TL I N KVHRIL+DGGSSAD+ S  A+ AM L    L+ S   LVGFGGE+V   G +ELPVTFG G + VT+MV+FLVV+  
Subjt:  KEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCV

Query:  PAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE
         +YN ILGR T+H LK + STYHQ +KF    GV  +  E
Subjt:  PAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE

XP_030923338.1 uncharacterized protein LOC115950248 [Quercus lobata]6.0e-4742.91Show/hide
Query:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTAR-----------ARRQGMY----
        EK++ D ++RNKNKYC FH DH H T EC  L+ +IE LIR+G LK F+G D    R D   +G+ +   R   G  R           ++ +  Y    
Subjt:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTAR-----------ARRQGMY----

Query:  -----------SLLLDENSLKLEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGS
                   + L+DE +  + F D++   IHH H+DA+V+TL I +    R+L+D GSSAD+    AF  M+LG D LRP  + L+GFGG KV P G+
Subjt:  -----------SLLLDENSLKLEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGS

Query:  VELPVTFGEGLQTVTRMVNFLVVDCVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVG
        + LPV  G   Q +TR VNFLVVDC  +YNAI+GR TL+  KA+ STYH  +KF  E G+G
Subjt:  VELPVTFGEGLQTVTRMVNFLVVDCVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVG

XP_030924962.1 uncharacterized protein LOC115951997 [Quercus lobata]4.2e-4847.52Show/hide
Query:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLK-----
        EK++ D ++RN+NKYC FH DH H T EC  L+ +IE+LIR+G L+ F+G D      D   +G+ +   R   G  +    G  S +    S K     
Subjt:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLK-----

Query:  LEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFL
        +   ++E   IHHLH+DA+V+TL I +    RIL+D GSSAD+    AF  MKLG D LRP  +LLVGFGG KV P G+V LPV  G   Q VT+ VNFL
Subjt:  LEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFL

Query:  VVDCVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAV
        VVDC  +YNAI+GR TL+  KAV STYH  +KF  + GVG V
Subjt:  VVDCVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAV

XP_030975818.1 uncharacterized protein LOC115995403 [Quercus lobata]6.0e-4742.91Show/hide
Query:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTAR-----------ARRQGMY----
        EK++ D ++RNKNKYC FH DH H T EC  L+ +IE LIR+G LK F+G D    R D   +G+ +   R   G  R           ++ +  Y    
Subjt:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTAR-----------ARRQGMY----

Query:  -----------SLLLDENSLKLEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGS
                   + L+DE +  + F D++   IHH H+DA+V+TL I +    R+L+D GSSAD+    AF  M+LG D LRP  + L+GFGG KV P G+
Subjt:  -----------SLLLDENSLKLEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGS

Query:  VELPVTFGEGLQTVTRMVNFLVVDCVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVG
        + LPV  G   Q +TR VNFLVVDC  +YNAI+GR TL+  KA+ STYH  +KF  E G+G
Subjt:  VELPVTFGEGLQTVTRMVNFLVVDCVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVG

TrEMBL top hitse value%identityAlignment
A0A6J1D8C9 uncharacterized protein LOC1110183002.5e-4640.86Show/hide
Query:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADR-----ARQGR-------QKTKGRNGRGTARARRQG-----
        E++ +   +R+K +YC+FH DHDH T++C  L+ +++ LI+ GYLKE++   +     +      AR+ R       ++  GR  + + R  R       
Subjt:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADR-----ARQGR-------QKTKGRNGRGTARARRQG-----

Query:  MYSLLLDENSLKLEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGE
        +Y   + +   K+EF++ E   + H HND LV+TL I NAKVHRIL+DGGSSAD+ S  A+ AM LG    + S   LV F GE+V P G  EL VTFG 
Subjt:  MYSLLLDENSLKLEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGE

Query:  GLQTVTRMVNFLVVDCVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE
        G +++T +++FLV+D   +YNAILGR T+H LKA+ STYHQ + F    G+G + +E
Subjt:  GLQTVTRMVNFLVVDCVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE

A0A6J1DAK4 uncharacterized protein LOC1110189025.3e-4945Show/hide
Query:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLKLEFAD
        E++++   +R K +YC FH DH H T++C  L++++E LI+ GYLKE++       +A + ++ RQ  K              +Y   ++E   K+EF +
Subjt:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLKLEFAD

Query:  KEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCV
         EV  I H HNDALV+ L I NAKVH IL+DGGSS D+ S  A+  M LG   L+ S   LVGFGGE V P G +ELPVTFG G +++T+MV+FLVVD  
Subjt:  KEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCV

Query:  PAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE
         + NAILGR T+H LKA+ S YHQ +KF    G+G +  E
Subjt:  PAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE

A0A6J1DP33 uncharacterized protein LOC1110228861.1e-4642.5Show/hide
Query:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLKLEFAD
        E++++   +R+K +Y +FH DH H T++C  L++++E LIR GYLKE++   +                 +NG   + +  + + + +++E   KLEF++
Subjt:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLKLEFAD

Query:  KEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCV
         E   + H HNDALV+TL I NAKVHRIL+DGGSS  + S  A+ AM LG   L+ S   LVGFGGE+V P G +ELPV FG G +++ +MV+FLVV   
Subjt:  KEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCV

Query:  PAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE
         +YN ILGR  +H LK + STYHQ +KF    G+G +  E
Subjt:  PAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE

A0A6J1DRG9 uncharacterized protein LOC1110235877.0e-4944.17Show/hide
Query:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLKLEFAD
        E++++   +R+K +YC+FH DHDH T++C  L++++E LIR GYLKE    ++ +     AR  R++ +              +Y   + +  + +EF++
Subjt:  EKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLLLDENSLKLEFAD

Query:  KEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCV
         E   + H HNDALV+TL I N KVHRIL+DGGSSAD+ S  A+ AM L    L+ S   LVGFGGE+V   G +ELPVTFG G + VT+MV+FLVV+  
Subjt:  KEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVDCV

Query:  PAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE
         +YN ILGR T+H LK + STYHQ +KF    GV  +  E
Subjt:  PAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE

A0A6J1DV51 uncharacterized protein LOC1110246624.7e-4540.78Show/hide
Query:  LRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKT-----KGRNGRGTARARRQGM------------Y
        +++  ++R+K +YC+FH DH H T++C  L++++E LIR GYLKE++   +    ++   +   K       G   R   + R+  M            Y
Subjt:  LRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKT-----KGRNGRGTARARRQGM------------Y

Query:  SLLLDENSLKLEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGL
                 K++F++ E   + H HNDALV+TL I N KVHRIL+DGGSS  + S  A+ AM LG   L+ +L  LVGFGGE+V  +  ++LPVTFG G 
Subjt:  SLLLDENSLKLEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGL

Query:  QTVTRMVNFLVVDCVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE
        + +T++V FLVVD   +YNAILGR T+H LKA+ STYH+ LKF  + G+  V  E
Subjt:  QTVTRMVNFLVVDCVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGAGGCCGACAAGAGGCCAAGGAGCCGCAAGGCCGTGTGGAACCAAAAGCCAGATTCGACAGAAAAGTTGAGATCAGACCTCGACAGGAGGAACAAAAACAAATA
TTGCATGTTCCACGGAGACCACGACCATACAACCCGAGAGTGCATCCAGTTGCGGGACAAGATAGAAACCCTAATCCGAGAGGGTTACCTGAAGGAATTCATAGGACATG
ACAGGGGAAGAGGCCGTGCAGACAGAGCTAGGCAAGGGAGGCAGAAAACGAAAGGCCGCAATGGTAGAGGCACAGCAAGAGCCCGAAGGCAAGGTATGTATTCGCTCCTA
CTCGATGAAAACTCACTAAAGTTAGAGTTTGCAGATAAAGAGGTGGCGGGGATACATCATCTGCACAACGACGCGCTGGTGGTCACCCTAACGATTGTCAACGCAAAAGT
TCACCGGATCCTCATCGATGGAGGGAGTTCTGCTGATGTTCACTCAACCGTTGCTTTTGATGCCATGAAGCTGGGAAGCGATCACCTGAGGCCAAGCCTCACGCTGCTGG
TGGGGTTTGGTGGAGAAAAAGTAAGCCCAAGAGGAAGTGTCGAACTGCCAGTGACGTTTGGGGAAGGACTGCAGACAGTAACAAGAATGGTCAACTTTCTAGTGGTAGAC
TGTGTCCCAGCATATAATGCCATTTTGGGACGATCCACCTTACATGGACTTAAAGCTGTAGCTTCAACCTACCACCAAGTCCTGAAATTCCAAGCTGAAGAAGGTGTAGG
AGCGGTGTACGACGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGAGGCCGACAAGAGGCCAAGGAGCCGCAAGGCCGTGTGGAACCAAAAGCCAGATTCGACAGAAAAGTTGAGATCAGACCTCGACAGGAGGAACAAAAACAAATA
TTGCATGTTCCACGGAGACCACGACCATACAACCCGAGAGTGCATCCAGTTGCGGGACAAGATAGAAACCCTAATCCGAGAGGGTTACCTGAAGGAATTCATAGGACATG
ACAGGGGAAGAGGCCGTGCAGACAGAGCTAGGCAAGGGAGGCAGAAAACGAAAGGCCGCAATGGTAGAGGCACAGCAAGAGCCCGAAGGCAAGGTATGTATTCGCTCCTA
CTCGATGAAAACTCACTAAAGTTAGAGTTTGCAGATAAAGAGGTGGCGGGGATACATCATCTGCACAACGACGCGCTGGTGGTCACCCTAACGATTGTCAACGCAAAAGT
TCACCGGATCCTCATCGATGGAGGGAGTTCTGCTGATGTTCACTCAACCGTTGCTTTTGATGCCATGAAGCTGGGAAGCGATCACCTGAGGCCAAGCCTCACGCTGCTGG
TGGGGTTTGGTGGAGAAAAAGTAAGCCCAAGAGGAAGTGTCGAACTGCCAGTGACGTTTGGGGAAGGACTGCAGACAGTAACAAGAATGGTCAACTTTCTAGTGGTAGAC
TGTGTCCCAGCATATAATGCCATTTTGGGACGATCCACCTTACATGGACTTAAAGCTGTAGCTTCAACCTACCACCAAGTCCTGAAATTCCAAGCTGAAGAAGGTGTAGG
AGCGGTGTACGACGAGTAG
Protein sequenceShow/hide protein sequence
MVEADKRPRSRKAVWNQKPDSTEKLRSDLDRRNKNKYCMFHGDHDHTTRECIQLRDKIETLIREGYLKEFIGHDRGRGRADRARQGRQKTKGRNGRGTARARRQGMYSLL
LDENSLKLEFADKEVAGIHHLHNDALVVTLTIVNAKVHRILIDGGSSADVHSTVAFDAMKLGSDHLRPSLTLLVGFGGEKVSPRGSVELPVTFGEGLQTVTRMVNFLVVD
CVPAYNAILGRSTLHGLKAVASTYHQVLKFQAEEGVGAVYDE