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Lag0028185 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028185
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:15061385..15062476
RNA-Seq ExpressionLag0028185
SyntenyLag0028185
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68153.1 hypothetical protein VITISV_009302 [Vitis vinifera]8.4e-1142.27Show/hide
Query:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGP
        +V RRS EK   S ++ +MK F+S+I   +L+D PLQN  FTWS+  ES+   RLDRFL +    +     L   + R TSDH+P+V+      WGP
Subjt:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGP

CAN71949.1 hypothetical protein VITISV_010315 [Vitis vinifera]5.4e-1040.82Show/hide
Query:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGPL
        +V RRS EK   S ++ +MK F+S+I   +L+D PL+N  FTWS+  ES    RLDRFL +          L     R TSDH+P+V+      WGP+
Subjt:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGPL

RVW76061.1 putative mitochondrial protein [Vitis vinifera]1.7e-1141.84Show/hide
Query:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGPL
        +V R+S EK   S ++ +MK F+S+I   +L+D PLQN  FTWS+F ES+   RLDRFL +    +     L   + R TSDH+P+V+      WGP+
Subjt:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGPL

XP_022154822.1 uncharacterized protein LOC111021983 [Momordica charantia]8.4e-1137.11Show/hide
Query:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGP
        +V+R   +K     ++R+M+ FN  I    L ++PL NG FTWS  G  +  S LD+FL++        +  + R++R+TSDH+P+V+ +GD +WGP
Subjt:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGP

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]5.8e-1241.67Show/hide
Query:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWG
        +VTR SWEK +   ++++M  FNS+I    L+D+PL NG  TWS    +   S +D FL+T  C+  +G P+ +RM R TSDH+P+++  G  +WG
Subjt:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWG

TrEMBL top hitse value%identityAlignment
A0A438GV32 Putative mitochondrial protein8.2e-1241.84Show/hide
Query:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGPL
        +V R+S EK   S ++ +MK F+S+I   +L+D PLQN  FTWS+F ES+   RLDRFL +    +     L   + R TSDH+P+V+      WGP+
Subjt:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGPL

A0A6J1DMQ9 uncharacterized protein LOC1110219834.1e-1137.11Show/hide
Query:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGP
        +V+R   +K     ++R+M+ FN  I    L ++PL NG FTWS  G  +  S LD+FL++        +  + R++R+TSDH+P+V+ +GD +WGP
Subjt:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGP

A0A6J1E2G6 uncharacterized protein LOC1110254052.8e-1241.67Show/hide
Query:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWG
        +VTR SWEK +   ++++M  FNS+I    L+D+PL NG  TWS    +   S +D FL+T  C+  +G P+ +RM R TSDH+P+++  G  +WG
Subjt:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWG

A5B2S8 Uncharacterized protein2.6e-1040.82Show/hide
Query:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGPL
        +V RRS EK   S ++ +MK F+S+I   +L+D PL+N  FTWS+  ES    RLDRFL +          L     R TSDH+P+V+      WGP+
Subjt:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGPL

A5BNY2 Uncharacterized protein4.1e-1142.27Show/hide
Query:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGP
        +V RRS EK   S ++ +MK F+S+I   +L+D PLQN  FTWS+  ES+   RLDRFL +    +     L   + R TSDH+P+V+      WGP
Subjt:  DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVI-LGDISWGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCTTTCCAATTGGATGATAGATAAAGATCTTTACTCGGCCCTTGAAGACAGTGATTGGGAAAAGGATTTCGATGTGAAGTTTCCATCTTTCTCTAAATTCTACCA
CCAAGAATCAAAGGATTCATTTAGAATTACCGCCTCAAGAGCATGTGATAGGCTGGCCCATTCCTATGTCTCTAGATCTGTAAGGTTCCTCCTAGGGCTGAAATTCCAAG
ATGCCATCCACAAATCAGCCTCCGTGCTTACTAGCATAGAAGAAGGGAAATCTATTATTAAGGGCTCATTACCCAGCCACATATCTGACCCGAGGAAATCATTTAGGCTA
GATGTTACTCGTCGTTCGTGGGAGAAGTTTCATGATAGCTTGGTTTCTAGAAATATGAAATCTTTCAATAGTTGGATTGCTACATACCAACTCATGGATATCCCCTTGCA
AAATGGATGCTTCACTTGGTCTAGTTTTGGTGAATCGAATTATCTCTCTCGGTTGGATCGATTTTTAGTCACTGCTACATGTCTTAAAACAATTGGCTCTCCTCTCCTGC
GTAGAATGGATCGACTGACTTCTGATCATTATCCATTGGTTATTCTTGGAGACATTTCTTGGGGTCCTCTTTTTGGTTTGAAAATACTTGGTAACAGGAAAGTACATTTG
ACAATTTGGTCGAGAGTTGGTGGTCTCAAAATCTTTTGCAAGGCTGGTCGGGATTTGGTTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTACCTTTCCAATTGGATGATAGATAAAGATCTTTACTCGGCCCTTGAAGACAGTGATTGGGAAAAGGATTTCGATGTGAAGTTTCCATCTTTCTCTAAATTCTACCA
CCAAGAATCAAAGGATTCATTTAGAATTACCGCCTCAAGAGCATGTGATAGGCTGGCCCATTCCTATGTCTCTAGATCTGTAAGGTTCCTCCTAGGGCTGAAATTCCAAG
ATGCCATCCACAAATCAGCCTCCGTGCTTACTAGCATAGAAGAAGGGAAATCTATTATTAAGGGCTCATTACCCAGCCACATATCTGACCCGAGGAAATCATTTAGGCTA
GATGTTACTCGTCGTTCGTGGGAGAAGTTTCATGATAGCTTGGTTTCTAGAAATATGAAATCTTTCAATAGTTGGATTGCTACATACCAACTCATGGATATCCCCTTGCA
AAATGGATGCTTCACTTGGTCTAGTTTTGGTGAATCGAATTATCTCTCTCGGTTGGATCGATTTTTAGTCACTGCTACATGTCTTAAAACAATTGGCTCTCCTCTCCTGC
GTAGAATGGATCGACTGACTTCTGATCATTATCCATTGGTTATTCTTGGAGACATTTCTTGGGGTCCTCTTTTTGGTTTGAAAATACTTGGTAACAGGAAAGTACATTTG
ACAATTTGGTCGAGAGTTGGTGGTCTCAAAATCTTTTGCAAGGCTGGTCGGGATTTGGTTTCATGA
Protein sequenceShow/hide protein sequence
MYLSNWMIDKDLYSALEDSDWEKDFDVKFPSFSKFYHQESKDSFRITASRACDRLAHSYVSRSVRFLLGLKFQDAIHKSASVLTSIEEGKSIIKGSLPSHISDPRKSFRL
DVTRRSWEKFHDSLVSRNMKSFNSWIATYQLMDIPLQNGCFTWSSFGESNYLSRLDRFLVTATCLKTIGSPLLRRMDRLTSDHYPLVILGDISWGPLFGLKILGNRKVHL
TIWSRVGGLKIFCKAGRDLVS