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Lag0028186 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028186
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr8:15063671..15064264
RNA-Seq ExpressionLag0028186
SyntenyLag0028186
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.3e-2133.87Show/hide
Query:  KRGQNDSETNEWASLSHLLPSIRIRAIDDTWYWPIDLSNAFTVKS----LMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRK
        +R  ND E N+WA +  +LP  R  +      W  D  N+F++ S    +   +   S    SKL  ++WK   P KIK F+W L    INT + +Q R 
Subjt:  KRGQNDSETNEWASLSHLLPSIRIRAIDDTWYWPIDLSNAFTVKS----LMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRK

Query:  PYFHLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFWAK
        P   L PSWCV+C  D+E+  HLF HC      WS + NAF  SL L  +    + F    H F   +K+++  +  +F W  W +
Subjt:  PYFHLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFWAK

ONI36148.1 hypothetical protein PRUPE_1G572100 [Prunus persica]3.3e-2132.04Show/hide
Query:  KRGQNDSETNEWASLSHLLPSIRIRAID-DTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF
        +R  N+ ET E   L   L  IR+ A   D   W ++ S +FT KS    +       +   +++VWK   P K+K+F+W ++LG +NT D +QR++P+ 
Subjt:  KRGQNDSETNEWASLSHLLPSIRIRAID-DTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF

Query:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFW
        +LSP WCV+C    E++ HLF HC F+   W  ++   G   ++P    + L   FV      +   LW  L     W  W
Subjt:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFW

VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]7.3e-2131.79Show/hide
Query:  KRGQNDSETNEWASLSHLLPSIRI-RAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF
        +R  N+ E  E A L  LL  +R+  +  D   W  D S  FT  SL   +    +  +   Y  +WK   P K+KIF+W+  LG +NT D LQRR PY 
Subjt:  KRGQNDSETNEWASLSHLLPSIRI-RAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF

Query:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVK-KILWLALNRVFLWFFWAKE----WSNFQG
         +SP WC +C    +++ HL  HC F+ + W T+        ++P   + + + I +     G K KILW +L +  +W  W +     + N++G
Subjt:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVK-KILWLALNRVFLWFFWAKE----WSNFQG

VVA39726.1 Hypothetical predicted protein, partial [Prunus dulcis]2.8e-2032.97Show/hide
Query:  KRGQNDSETNEWASLSHLLPSIRI-RAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF
        +R  N+ E  E A L  LL  +R+  +  D   W +D S  FT  SL   +    +      Y  +WK   P K+KIF+W+  LG +NT D LQRR PY 
Subjt:  KRGQNDSETNEWASLSHLLPSIRI-RAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF

Query:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVK-KILWLALNRVFLWFFW
         +SP WC +C    +++ HL  HC F+ + W T+        ++P   + + + I +     G K KILW +L +  +W  W
Subjt:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVK-KILWLALNRVFLWFFW

XP_020420593.1 uncharacterized protein LOC18774736 [Prunus persica]4.7e-2031.49Show/hide
Query:  KRGQNDSETNEWASLSHLLPSIR-IRAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF
        +R  N+ E  E A L  LL  +R I +  D   W +D    FT  S    +    +      Y  +WK   P K+KIF+W+  LG +NT D LQRR PY 
Subjt:  KRGQNDSETNEWASLSHLLPSIR-IRAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF

Query:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFW
         +SP WC +C    +++ HL  HC F+ + W T+        ++P   + + +  F         KILW +L +  +W  W
Subjt:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFW

TrEMBL top hitse value%identityAlignment
A0A251RJG1 zf-RVT domain-containing protein1.6e-2132.04Show/hide
Query:  KRGQNDSETNEWASLSHLLPSIRIRAID-DTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF
        +R  N+ ET E   L   L  IR+ A   D   W ++ S +FT KS    +       +   +++VWK   P K+K+F+W ++LG +NT D +QR++P+ 
Subjt:  KRGQNDSETNEWASLSHLLPSIRIRAID-DTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF

Query:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFW
        +LSP WCV+C    E++ HLF HC F+   W  ++   G   ++P    + L   FV      +   LW  L     W  W
Subjt:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFW

A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein3.5e-2133.87Show/hide
Query:  KRGQNDSETNEWASLSHLLPSIRIRAIDDTWYWPIDLSNAFTVKS----LMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRK
        +R  ND E N+WA +  +LP  R  +      W  D  N+F++ S    +   +   S    SKL  ++WK   P KIK F+W L    INT + +Q R 
Subjt:  KRGQNDSETNEWASLSHLLPSIRIRAIDDTWYWPIDLSNAFTVKS----LMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRK

Query:  PYFHLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFWAK
        P   L PSWCV+C  D+E+  HLF HC      WS + NAF  SL L  +    + F    H F   +K+++  +  +F W  W +
Subjt:  PYFHLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFWAK

A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)3.5e-2131.79Show/hide
Query:  KRGQNDSETNEWASLSHLLPSIRI-RAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF
        +R  N+ E  E A L  LL  +R+  +  D   W  D S  FT  SL   +    +  +   Y  +WK   P K+KIF+W+  LG +NT D LQRR PY 
Subjt:  KRGQNDSETNEWASLSHLLPSIRI-RAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF

Query:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVK-KILWLALNRVFLWFFWAKE----WSNFQG
         +SP WC +C    +++ HL  HC F+ + W T+        ++P   + + + I +     G K KILW +L +  +W  W +     + N++G
Subjt:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVK-KILWLALNRVFLWFFWAKE----WSNFQG

M5XJT6 zf-RVT domain-containing protein (Fragment)1.6e-2132.04Show/hide
Query:  KRGQNDSETNEWASLSHLLPSIRIRAID-DTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF
        +R  N+ ET E   L   L  IR+ A   D   W ++ S +FT KS    +       +   +++VWK   P K+K+F+W ++LG +NT D +QR++P+ 
Subjt:  KRGQNDSETNEWASLSHLLPSIRIRAID-DTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF

Query:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFW
        +LSP WCV+C    E++ HLF HC F+   W  ++   G   ++P    + L   FV      +   LW  L     W  W
Subjt:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFW

M5XTH8 zf-RVT domain-containing protein4.6e-2132.04Show/hide
Query:  KRGQNDSETNEWASLSHLLPSIR-IRAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF
        +R  N+ E  E A L  LL  +R I +  D   W +D S  FT  S    +    +      Y  +WK   P K+KIF+W+  LG +NT D LQRR PY 
Subjt:  KRGQNDSETNEWASLSHLLPSIR-IRAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYF

Query:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFW
         +SP WC +C    E++ H+  HC F+ + W T+        ++P   + + +  F         KILW +L +  +W  W
Subjt:  HLSPSWCVVCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATCAAACGGGGTCAAAATGATTCGGAGACAAATGAGTGGGCTAGTCTCTCTCATCTGCTTCCTTCCATCAGAATACGAGCTATTGATGACACTTGGTATTGGCC
TATAGATTTGTCTAATGCATTCACAGTTAAATCGCTTATGGGAGATATGGTTGGTGATTCTGACCCCACATCGAGCAAATTATATAATGTGGTGTGGAAAGACGTTTATC
CTAAGAAGATCAAAATTTTTATCTGGGAGCTTAGTCTTGGAGCTATTAATACATTTGACCGACTTCAAAGACGAAAGCCTTATTTTCACCTTTCTCCATCCTGGTGTGTT
GTGTGTTGTTCTGATGCTGAAAATCTTTGTCATCTATTTGCGCATTGTTCCTTTGCTTCCCGTTATTGGTCTACGATCTTCAATGCCTTTGGGTGGTCCTTGATTTTACC
AAACAACATTTATAATGTTCTTGCTTTCATTTTTGTGGGACATCCCTTCCATGGTGTGAAGAAGATCCTTTGGCTTGCTCTTAACAGGGTCTTCCTCTGGTTTTTTTGGG
CGAAGGAATGGTCGAATTTTCAAGGATCCATTCTCATCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTATCAAACGGGGTCAAAATGATTCGGAGACAAATGAGTGGGCTAGTCTCTCTCATCTGCTTCCTTCCATCAGAATACGAGCTATTGATGACACTTGGTATTGGCC
TATAGATTTGTCTAATGCATTCACAGTTAAATCGCTTATGGGAGATATGGTTGGTGATTCTGACCCCACATCGAGCAAATTATATAATGTGGTGTGGAAAGACGTTTATC
CTAAGAAGATCAAAATTTTTATCTGGGAGCTTAGTCTTGGAGCTATTAATACATTTGACCGACTTCAAAGACGAAAGCCTTATTTTCACCTTTCTCCATCCTGGTGTGTT
GTGTGTTGTTCTGATGCTGAAAATCTTTGTCATCTATTTGCGCATTGTTCCTTTGCTTCCCGTTATTGGTCTACGATCTTCAATGCCTTTGGGTGGTCCTTGATTTTACC
AAACAACATTTATAATGTTCTTGCTTTCATTTTTGTGGGACATCCCTTCCATGGTGTGAAGAAGATCCTTTGGCTTGCTCTTAACAGGGTCTTCCTCTGGTTTTTTTGGG
CGAAGGAATGGTCGAATTTTCAAGGATCCATTCTCATCTTTTGA
Protein sequenceShow/hide protein sequence
MVIKRGQNDSETNEWASLSHLLPSIRIRAIDDTWYWPIDLSNAFTVKSLMGDMVGDSDPTSSKLYNVVWKDVYPKKIKIFIWELSLGAINTFDRLQRRKPYFHLSPSWCV
VCCSDAENLCHLFAHCSFASRYWSTIFNAFGWSLILPNNIYNVLAFIFVGHPFHGVKKILWLALNRVFLWFFWAKEWSNFQGSILIF