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Lag0028213 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028213
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:15582020..15582607
RNA-Seq ExpressionLag0028213
SyntenyLag0028213
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5462052.1 hypothetical protein F2P56_018092 [Juglans regia]1.3e-2536.71Show/hide
Query:  KFRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPL
        +F N  ++NR+L G  WSFD  ++  ++ KGR +++DIDF     W+  H+LP     ++    LG S G+ +  ++DEKG++ G  LRVKV +D +KPL
Subjt:  KFRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPL

Query:  RRDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSESNTHRDYGVEF
         R   I  G    + WI   YE+LP FCY+CG + H   +C    S+ +TH +  +++
Subjt:  RRDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSESNTHRDYGVEF

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]8.8e-2736.17Show/hide
Query:  KFRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPL
        +F+N+  + R+L GG W FD  +L+  +  G   V D+ FRYV  W+  HNLP  C  R+  + LG  +G+  E +  E G+  G+ +R++V +D   PL
Subjt:  KFRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPL

Query:  RRDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQEC
        +R   +  G   +   + + YE+LP+FCY+CGK+GH+ ++C
Subjt:  RRDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQEC

TXG57565.1 hypothetical protein EZV62_015394 [Acer yangbiense]1.7e-2539.44Show/hide
Query:  KNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLRRDTNIK
        + +VL GG WSFDDA+++ E+P G+ ++  + F  VE WVH  NLP +C  ++ A  LG  IGE  E +    G   G+ LRV+V +D  KPLRR   + 
Subjt:  KNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLRRDTNIK

Query:  TGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSESN
             E+  + + +E+LP+FC++CG LGH+ + C E   + N
Subjt:  TGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSESN

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]3.1e-2435.94Show/hide
Query:  FRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLR
        F++   K+RVL  G W+F+ ++L+   P   +   D++F +   W+  HN+P  C   + A  LG  +G+  E E D      G  +RV+VK+D +KPLR
Subjt:  FRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLR

Query:  RDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGS--ESNTHRDYGVEFRETQSNKGIYRNTRFEKKEWIGRGRGRGKGRNG
        R   +K  S  +  W  + YEKLPDFCY CGK+GH  +ECE+      +N+   YG   R T   K +      E+  W G   GRG   NG
Subjt:  RDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGS--ESNTHRDYGVEFRETQSNKGIYRNTRFEKKEWIGRGRGRGKGRNG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.8e-2534.52Show/hide
Query:  NRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLRRDTNIKT
        NRV++ G W FD A+++ + P    ++ +++F  V  W+H  +LP     +  A+ LGN+IG F++ + +EKG   G +LR++V +D  KPLRR   I  
Subjt:  NRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLRRDTNIKT

Query:  GSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEE----GSESNTHRDYGVEFRETQSNKGIYRNTR
               WI + YE+LPDFCYFCG +GH   +C+        +S    +YG   R   S  G  +  +
Subjt:  GSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEE----GSESNTHRDYGVEFRETQSNKGIYRNTR

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein4.3e-2736.17Show/hide
Query:  KFRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPL
        +F+N+  + R+L GG W FD  +L+  +  G   V D+ FRYV  W+  HNLP  C  R+  + LG  +G+  E +  E G+  G+ +R++V +D   PL
Subjt:  KFRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPL

Query:  RRDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQEC
        +R   +  G   +   + + YE+LP+FCY+CGK+GH+ ++C
Subjt:  RRDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQEC

A0A5C7HLA0 CCHC-type domain-containing protein8.0e-2639.44Show/hide
Query:  KNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLRRDTNIK
        + +VL GG WSFDDA+++ E+P G+ ++  + F  VE WVH  NLP +C  ++ A  LG  IGE  E +    G   G+ LRV+V +D  KPLRR   + 
Subjt:  KNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLRRDTNIK

Query:  TGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSESN
             E+  + + +E+LP+FC++CG LGH+ + C E   + N
Subjt:  TGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSESN

A0A6J1D765 uncharacterized protein LOC1110179021.5e-2435.94Show/hide
Query:  FRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLR
        F++   K+RVL  G W+F+ ++L+   P   +   D++F +   W+  HN+P  C   + A  LG  +G+  E E D      G  +RV+VK+D +KPLR
Subjt:  FRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLR

Query:  RDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGS--ESNTHRDYGVEFRETQSNKGIYRNTRFEKKEWIGRGRGRGKGRNG
        R   +K  S  +  W  + YEKLPDFCY CGK+GH  +ECE+      +N+   YG   R T   K +      E+  W G   GRG   NG
Subjt:  RDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGS--ESNTHRDYGVEFRETQSNKGIYRNTRFEKKEWIGRGRGRGKGRNG

A0A6J1DU55 uncharacterized protein LOC1110231351.4e-2534.52Show/hide
Query:  NRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLRRDTNIKT
        NRV++ G W FD A+++ + P    ++ +++F  V  W+H  +LP     +  A+ LGN+IG F++ + +EKG   G +LR++V +D  KPLRR   I  
Subjt:  NRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLRRDTNIKT

Query:  GSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEE----GSESNTHRDYGVEFRETQSNKGIYRNTR
               WI + YE+LPDFCYFCG +GH   +C+        +S    +YG   R   S  G  +  +
Subjt:  GSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEE----GSESNTHRDYGVEFRETQSNKGIYRNTR

A0A6P9EGW2 uncharacterized protein LOC1183486452.0e-2435.45Show/hide
Query:  KFRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPL
        +F N  ++ RVL G  WSFD  ++  ++ KGR +++DIDF     W+   +LP     ++ +  LG S G+ +  ++DEKG+  GE LRVKV +D +KPL
Subjt:  KFRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPL

Query:  RRDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSESNTHR----DYGVEFRETQSNKGIYRNTRFEKKEWIGRGRGR
         R   I  G    + WI   YEKLP FCY+CG + H    C    S+ +TH      YG   R        +  T     E    G GR
Subjt:  RRDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSESNTHR----DYGVEFRETQSNKGIYRNTRFEKKEWIGRGRGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.7e-0722.6Show/hide
Query:  FRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLR
        F++ +    +LR G WSF+D + + +  +      D +F+ +  W+    +P      +   ++G  +G F+E  L                        
Subjt:  FRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLR

Query:  RDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSE
        RD ++          +K  YEKL +FC  CG L H   EC   G++
Subjt:  RDTNIKTGSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAAGTTCAGAAATCACAAGTTAAAAAATAGAGTATTAAGGGGGGGACTGTGGAGCTTTGATGACGCGATCCTTCTGTTCGAAGACCCAAAAGGGAGAAGCAGCGT
CGAAGATATTGACTTCAGGTATGTGGAGTTATGGGTTCACTTCCATAACTTACCTCGTGTCTGCTTTTGTAGGAAATACGCAGTGGCGCTTGGAAACTCGATTGGAGAAT
TCATGGAAGCAGAGTTGGACGAAAAAGGGAAGATGACTGGGGAGACTCTCAGAGTAAAAGTGAAGGTGGATGCCAATAAACCTCTAAGGAGGGACACCAACATCAAAACG
GGTTCAATGGCAGAGAAAGAATGGATAAAAGTAACATACGAAAAACTCCCGGACTTTTGTTATTTCTGTGGAAAACTCGGCCATATTGATCAAGAATGTGAAGAGGAAGG
TTCCGAAAGTAACACGCATAGAGATTATGGGGTGGAGTTCAGGGAAACCCAAAGCAACAAAGGGATTTACAGAAATACGAGATTTGAGAAAAAAGAATGGATAGGAAGAG
GAAGAGGGAGAGGTAAAGGAAGAAATGGTATGGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCAAGTTCAGAAATCACAAGTTAAAAAATAGAGTATTAAGGGGGGGACTGTGGAGCTTTGATGACGCGATCCTTCTGTTCGAAGACCCAAAAGGGAGAAGCAGCGT
CGAAGATATTGACTTCAGGTATGTGGAGTTATGGGTTCACTTCCATAACTTACCTCGTGTCTGCTTTTGTAGGAAATACGCAGTGGCGCTTGGAAACTCGATTGGAGAAT
TCATGGAAGCAGAGTTGGACGAAAAAGGGAAGATGACTGGGGAGACTCTCAGAGTAAAAGTGAAGGTGGATGCCAATAAACCTCTAAGGAGGGACACCAACATCAAAACG
GGTTCAATGGCAGAGAAAGAATGGATAAAAGTAACATACGAAAAACTCCCGGACTTTTGTTATTTCTGTGGAAAACTCGGCCATATTGATCAAGAATGTGAAGAGGAAGG
TTCCGAAAGTAACACGCATAGAGATTATGGGGTGGAGTTCAGGGAAACCCAAAGCAACAAAGGGATTTACAGAAATACGAGATTTGAGAAAAAAGAATGGATAGGAAGAG
GAAGAGGGAGAGGTAAAGGAAGAAATGGTATGGGCTAG
Protein sequenceShow/hide protein sequence
MRKFRNHKLKNRVLRGGLWSFDDAILLFEDPKGRSSVEDIDFRYVELWVHFHNLPRVCFCRKYAVALGNSIGEFMEAELDEKGKMTGETLRVKVKVDANKPLRRDTNIKT
GSMAEKEWIKVTYEKLPDFCYFCGKLGHIDQECEEEGSESNTHRDYGVEFRETQSNKGIYRNTRFEKKEWIGRGRGRGKGRNGMG