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Lag0028219 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028219
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRieske domain-containing protein
Genome locationchr8:15797817..15804297
RNA-Seq ExpressionLag0028219
SyntenyLag0028219
Gene Ontology termsGO:0007021 - tubulin complex assembly (biological process)
GO:0007023 - post-chaperonin tubulin folding pathway (biological process)
GO:0042128 - nitrate assimilation (biological process)
GO:0031967 - organelle envelope (cellular component)
GO:0008942 - nitrite reductase [NAD(P)H] activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0048487 - beta-tubulin binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR012748 - Rieske-like [2Fe-2S] domain, NirD-type
IPR036126 - Tubulin binding cofactor A superfamily
IPR036922 - Rieske [2Fe-2S] iron-sulphur domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG9136724.1 hypothetical protein Leryth_004495 [Lithospermum erythrorhizon]3.0e-2364.65Show/hide
Query:  YNSSHSVNFQKKRLGFLRC-----PSSSGTTEESSTS---GNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        +  S S  F KKR   + C      SSS   E SS S   GNWV VVPL+ALP+GERR+IIQ GETILLLWYKD++FA+ENRSPAEGAY+EGLINAKLT
Subjt:  YNSSHSVNFQKKRLGFLRC-----PSSSGTTEESSTS---GNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

XP_004141552.1 uncharacterized protein LOC101206141 [Cucumis sativus]6.1e-2483.1Show/hide
Query:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        S     EESS SGNWV VVPLSALPRGERR+IIQ GETILLLWYKD+IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

XP_008459624.1 PREDICTED: uncharacterized protein LOC103498694 [Cucumis melo]6.1e-2483.1Show/hide
Query:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        S     EESS SGNWV VVPLSALPRGERR+IIQ GETILLLWYKD+IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

XP_022973986.1 uncharacterized protein LOC111472599 [Cucurbita maxima]2.3e-2380.28Show/hide
Query:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        S     EESS SGNWV VVPLSALP+GERR+IIQ GET+LLLWYK+KIFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

XP_038891275.1 uncharacterized protein LOC120080616 [Benincasa hispida]2.7e-2484.51Show/hide
Query:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        S     EESS SGNWV VVPLSALPRGERR+IIQ GETILLLWYKDKIFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

TrEMBL top hitse value%identityAlignment
A0A0A0KXX5 Rieske domain-containing protein2.9e-2483.1Show/hide
Query:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        S     EESS SGNWV VVPLSALPRGERR+IIQ GETILLLWYKD+IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

A0A1S2YXG4 uncharacterized protein LOC1014978151.9e-2381.82Show/hide
Query:  TEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        +EESS+SGNWV VVP+SALP+GERR+IIQ+G++ILLLWYKDK+FA+ENRSPAEGAY+EGLINAKLT
Subjt:  TEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

A0A1S3CBV1 uncharacterized protein LOC1034986942.9e-2483.1Show/hide
Query:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        S     EESS SGNWV VVPLSALPRGERR+IIQ GETILLLWYKD+IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

A0A5D3BMM3 Rieske domain-containing protein2.9e-2483.1Show/hide
Query:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        S     EESS SGNWV VVPLSALPRGERR+IIQ GETILLLWYKD+IFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

A0A6J1IA65 uncharacterized protein LOC1114725991.1e-2380.28Show/hide
Query:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        S     EESS SGNWV VVPLSALP+GERR+IIQ GET+LLLWYK+KIFA+ENRSPAEGAYTEGL+NAKLT
Subjt:  SSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

SwissProt top hitse value%identityAlignment
O04350 Tubulin-folding cofactor A3.4e-0943.96Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVQTL----------FWLLRVTCEGAGFCFWESSKMDNNWGPKIEDSDSNTEELELLDPS
        ELHSYEKEVEREAAKTA+MK+KGAD YDLKQQ   L             L            E  + D   GP+IED+     ++E   P+
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVQTL----------FWLLRVTCEGAGFCFWESSKMDNNWGPKIEDSDSNTEELELLDPS

Arabidopsis top hitse value%identityAlignment
AT1G71500.1 Rieske (2Fe-2S) domain-containing protein1.9e-2359.3Show/hide
Query:  NFQKKRLGFLRCPSS--SGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT
        N +++  G +RC ++  S ++  S+   NWV VVPLSALP+GERR++IQ  ETILLLWYK+ +FA+ENRSPAEGAY+EGL+NA+LT
Subjt:  NFQKKRLGFLRCPSS--SGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLT

AT2G30410.1 tubulin folding cofactor A (KIESEL)2.4e-1043.96Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVQTL----------FWLLRVTCEGAGFCFWESSKMDNNWGPKIEDSDSNTEELELLDPS
        ELHSYEKEVEREAAKTA+MK+KGAD YDLKQQ   L             L            E  + D   GP+IED+     ++E   P+
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVQTL----------FWLLRVTCEGAGFCFWESSKMDNNWGPKIEDSDSNTEELELLDPS

AT2G30410.2 tubulin folding cofactor A (KIESEL)2.4e-1043.96Show/hide
Query:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVQTL----------FWLLRVTCEGAGFCFWESSKMDNNWGPKIEDSDSNTEELELLDPS
        ELHSYEKEVEREAAKTA+MK+KGAD YDLKQQ   L             L            E  + D   GP+IED+     ++E   P+
Subjt:  ELHSYEKEVEREAAKTANMKEKGADHYDLKQQVQTL----------FWLLRVTCEGAGFCFWESSKMDNNWGPKIEDSDSNTEELELLDPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTACAACAGCTCACACTCAGTCAATTTTCAGAAGAAGAGATTAGGGTTTCTTCGATGCCCAAGTTCTTCAGGAACAACCGAGGAATCGTCGACATCTGGTAACTG
GGTGCTGGTGGTTCCGTTGTCGGCGTTGCCGAGAGGGGAGCGACGCATGATTATTCAGCAAGGTGAGACGATTTTGCTTCTTTGGTATAAGGATAAGATTTTTGCTCTTG
AGAATAGGTCTCCTGCTGAAGGTGCTTACACTGAAGGCCTCATCAATGCCAAGCTAACAATGGTTGAACAAATTGCCCAATTGGAGTTGCATTCTTATGAGAAGGAGGTA
GAGAGAGAAGCTGCCAAAACAGCTAACATGAAAGAAAAAGGAGCTGACCATTATGACCTTAAGCAACAGGTGCAGACATTGTTTTGGCTGCTCAGAGTCACTTGTGAGGG
TGCTGGCTTTTGTTTTTGGGAAAGCTCCAAGATGGACAACAACTGGGGTCCAAAGATTGAAGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCTG
CATTAAATTTTTGTGTCATGTTTTGTCGAGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAGGAATGAAAGCGGCATACTCCCACAAGTCGTTCTTGGCCCG
GAGAATAGTAGGGAAGACACTAGAGGTGGTCCACACACCGTTCGTGATCAAAGGAATCAAAGAGAGTTGCTAAATCGGTCTCCAAAAAGGTTGGTACAAATTCTGCTCTC
TGCTTACGAATATGTTGCTGGGCGACTTCAGGGAGAAAATTCTGTGTTGGAGCAAAGTTGGGAGCAAAACTGCCACGTTACAGCTCGTTCGCCAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTACAACAGCTCACACTCAGTCAATTTTCAGAAGAAGAGATTAGGGTTTCTTCGATGCCCAAGTTCTTCAGGAACAACCGAGGAATCGTCGACATCTGGTAACTG
GGTGCTGGTGGTTCCGTTGTCGGCGTTGCCGAGAGGGGAGCGACGCATGATTATTCAGCAAGGTGAGACGATTTTGCTTCTTTGGTATAAGGATAAGATTTTTGCTCTTG
AGAATAGGTCTCCTGCTGAAGGTGCTTACACTGAAGGCCTCATCAATGCCAAGCTAACAATGGTTGAACAAATTGCCCAATTGGAGTTGCATTCTTATGAGAAGGAGGTA
GAGAGAGAAGCTGCCAAAACAGCTAACATGAAAGAAAAAGGAGCTGACCATTATGACCTTAAGCAACAGGTGCAGACATTGTTTTGGCTGCTCAGAGTCACTTGTGAGGG
TGCTGGCTTTTGTTTTTGGGAAAGCTCCAAGATGGACAACAACTGGGGTCCAAAGATTGAAGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCTG
CATTAAATTTTTGTGTCATGTTTTGTCGAGGTTCTTCAAGTTTGATGTACGAGCAAGATTATGGTGACAGGAATGAAAGCGGCATACTCCCACAAGTCGTTCTTGGCCCG
GAGAATAGTAGGGAAGACACTAGAGGTGGTCCACACACCGTTCGTGATCAAAGGAATCAAAGAGAGTTGCTAAATCGGTCTCCAAAAAGGTTGGTACAAATTCTGCTCTC
TGCTTACGAATATGTTGCTGGGCGACTTCAGGGAGAAAATTCTGTGTTGGAGCAAAGTTGGGAGCAAAACTGCCACGTTACAGCTCGTTCGCCAATTTGA
Protein sequenceShow/hide protein sequence
MFYNSSHSVNFQKKRLGFLRCPSSSGTTEESSTSGNWVLVVPLSALPRGERRMIIQQGETILLLWYKDKIFALENRSPAEGAYTEGLINAKLTMVEQIAQLELHSYEKEV
EREAAKTANMKEKGADHYDLKQQVQTLFWLLRVTCEGAGFCFWESSKMDNNWGPKIEDSDSNTEELELLDPSPALNFCVMFCRGSSSLMYEQDYGDRNESGILPQVVLGP
ENSREDTRGGPHTVRDQRNQRELLNRSPKRLVQILLSAYEYVAGRLQGENSVLEQSWEQNCHVTARSPI