; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0028243 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028243
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr8:16199646..16201308
RNA-Seq ExpressionLag0028243
SyntenyLag0028243
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE1233889.1 unnamed protein product [Sepia pharaonis]1.6e-1031.14Show/hide
Query:  LTQLRWSSFS----PSSKVLTRFVAVPSLQGRRFS------RTVSQFFLPKFEGSRTSMQFLLPSSKVLTRFVAVPSLQGRRFSRAASQFFLPKFEGSRT
        L  ++  SFS    PSSK+   F ++PS++ + FS      ++ S F LP    S+ ++ FLL + +  + F   P      F    + F L       T
Subjt:  LTQLRWSSFS----PSSKVLTRFVAVPSLQGRRFS------RTVSQFFLPKFEGSRTSMQFLLPSSKVLTRFVAVPSLQGRRFSRAASQFFLPKFEGSRT

Query:  SLQFLLPNSKVFTRFVTVPSSKFEGSPLLQFILPSSKVLTSLRCSSFLQVRRFSRASLQFLPPSSKVFTRFVAVPSSKFKGSHALRCSSFLQVRRFKRTS
        +L F LP+SK+   F+++PSSK   S    F LPSSK+      S+  ++  FS        PSSK+   F ++PSSK    H L    F  +   K T 
Subjt:  SLQFLLPNSKVFTRFVTVPSSKFEGSPLLQFILPSSKVLTSLRCSSFLQVRRFSRASLQFLPPSSKVFTRFVAVPSSKFKGSHALRCSSFLQVRRFKRTS

Query:  LQFLLPNSKVFTRFVAVSSSKFEGSPLLQFILP-SSKVLTSL----RCSSFLQVRRFSRASLQFIPPSSKVFTRFVAVPSSKFKGSHAL
        L F LP+SK+F  F ++ SSK     +     P  S+  +SL    +  +F  +    ++ L F  PSSK+   F+++PSSK     +L
Subjt:  LQFLLPNSKVFTRFVAVSSSKFEGSPLLQFILP-SSKVLTSL----RCSSFLQVRRFSRASLQFIPPSSKVFTRFVAVPSSKFKGSHAL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACTTGGAGGTGAAACTTTTTGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGAAAGTTCTATGTTCTCATAAATACAGA
TGGTTCCTTGAAGTTCCTTCTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGCTGTTGCATTGT
TCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTCGCTGGAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGGTCGA
AGGTTCTCACGCACTGTGTCGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGATGCAGTTCCTTCTCCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGT
TCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTCGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCTCGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTT
TCACGCGCTTCGTTACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCCGCTGCTGCAGTTCATTCTTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTC
CAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCT
TCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCAAACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTTTCACGCGCTTCGTTGCAGTTTCTTCCTCCAAGT
TCGAAGGTTCTCCGCTACTGCAGTTCATTCTTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAG
TTCATTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTT
CAAACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTTGAAGGTCCTCATGCTACGCTCGGTTGCACTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACG
CTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTCCTCATGCTACGCTCGGCTACACTGCTGCACTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTTGCACTTATGCTGAA
AGGCGTGGCGGCGACACAAGTCCAAGGACACGCCCCAAAATAAGGAACATGTCCCTGTTCTCATGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACTTGGAGGTGAAACTTTTTGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGAAAGTTCTATGTTCTCATAAATACAGA
TGGTTCCTTGAAGTTCCTTCTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGCTGTTGCATTGT
TCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTCGCTGGAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGGTCGA
AGGTTCTCACGCACTGTGTCGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGATGCAGTTCCTTCTCCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGT
TCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTCGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCTCGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTT
TCACGCGCTTCGTTACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCCGCTGCTGCAGTTCATTCTTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTC
CAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCT
TCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCAAACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTTTCACGCGCTTCGTTGCAGTTTCTTCCTCCAAGT
TCGAAGGTTCTCCGCTACTGCAGTTCATTCTTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAG
TTCATTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTT
CAAACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTTGAAGGTCCTCATGCTACGCTCGGTTGCACTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACG
CTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTCCTCATGCTACGCTCGGCTACACTGCTGCACTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTTGCACTTATGCTGAA
AGGCGTGGCGGCGACACAAGTCCAAGGACACGCCCCAAAATAAGGAACATGTCCCTGTTCTCATGCTGA
Protein sequenceShow/hide protein sequence
MANLEVKLFDEVNNDKKLQSSIPSRMKRKFYVLINTDGSLKFLLSKFEGSQLYDCYVVPPPSAKDLMWCAVALFPLLSSSMVLTQLRWSSFSPSSKVLTRFVAVPSLQGR
RFSRTVSQFFLPKFEGSRTSMQFLLPSSKVLTRFVAVPSLQGRRFSRAASQFFLPKFEGSRTSLQFLLPNSKVFTRFVTVPSSKFEGSPLLQFILPSSKVLTSLRCSSFL
QVRRFSRASLQFLPPSSKVFTRFVAVPSSKFKGSHALRCSSFLQVRRFKRTSLQFLLPNSKVFTRFVAVSSSKFEGSPLLQFILPSSKVLTSLRCSSFLQVRRFSRASLQ
FIPPSSKVFTRFVAVPSSKFKGSHALRCSSFLQVRRFKRASLQFLPPSLKVLMLRSVALLRYFLKSKDVNCPHAALLPSPSSKVLMLRSATLLHYFLKSKDVNCPCTYAE
RRGGDTSPRTRPKIRNMSLFSC