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Lag0028262 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028262
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr8:17044098..17044694
RNA-Seq ExpressionLag0028262
SyntenyLag0028262
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.6e-0732.65Show/hide
Query:  FINNLARAKYVEMLRRDFLFDRGF------GDDLPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQ
        F++  A+  Y  +  R   F+ GF        +L   +   +  H W +F   P PVN+ IV+EFY+NI +      +VRG+ + ++P AIN  F LQ
Subjt:  FINNLARAKYVEMLRRDFLFDRGF------GDDLPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQ

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]2.7e-0733.87Show/hide
Query:  ARAKYVEMLR-RDFLFDRGF-GD-----DLPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQDFPHAC
        A  +Y E ++ R    ++GF GD     + P  +   I  H W  FCA P+ + + +VREFYAN+ + +     VRGV V  S  AIN+++ L D P   
Subjt:  ARAKYVEMLR-RDFLFDRGF-GD-----DLPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQDFPHAC

Query:  FNEMVVAPSNDQLNAAVREVGIDG
         +E V A +  +L   +  V I G
Subjt:  FNEMVVAPSNDQLNAAVREVGIDG

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]9.3e-0851.72Show/hide
Query:  IANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD
        I  H W QFCA P+     +VREFYAN+ D E     VRGV V WS  AIN++F L D
Subjt:  IANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]6.0e-0750Show/hide
Query:  IANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD
        I  H W QFCA P+     +VREFYAN+ D E     VRGV V W+  AIN++F L D
Subjt:  IANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]4.6e-0736.61Show/hide
Query:  FINNLARAKYVEMLRRDFL-FDRGFGDD------LPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD
        F +  A A+Y E ++   L  ++GF  +       P  +   I  H W  FCA  +     +VREFYAN+ D E     V+GV V WS  AIN+LF L D
Subjt:  FINNLARAKYVEMLRRDFL-FDRGFGDD------LPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD

Query:  --FPHACFNEMV
            H+ F E V
Subjt:  --FPHACFNEMV

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein1.3e-0733.87Show/hide
Query:  ARAKYVEMLR-RDFLFDRGF-GD-----DLPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQDFPHAC
        A  +Y E ++ R    ++GF GD     + P  +   I  H W  FCA P+ + + +VREFYAN+ + +     VRGV V  S  AIN+++ L D P   
Subjt:  ARAKYVEMLR-RDFLFDRGF-GD-----DLPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQDFPHAC

Query:  FNEMVVAPSNDQLNAAVREVGIDG
         +E V A +  +L   +  V I G
Subjt:  FNEMVVAPSNDQLNAAVREVGIDG

A0A2P5BCG4 Uncharacterized protein (Fragment)4.5e-0851.72Show/hide
Query:  IANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD
        I  H W QFCA P+     +VREFYAN+ D E     VRGV V WS  AIN++F L D
Subjt:  IANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD

A0A2P5EK98 Uncharacterized protein (Fragment)2.9e-0750Show/hide
Query:  IANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD
        I  H W QFCA P+     +VREFYAN+ D E     VRGV V W+  AIN++F L D
Subjt:  IANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD

A0A2P5EYL5 Uncharacterized protein2.2e-0736.61Show/hide
Query:  FINNLARAKYVEMLRRDFL-FDRGFGDD------LPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD
        F +  A A+Y E ++   L  ++GF  +       P  +   I  H W  FCA  +     +VREFYAN+ D E     V+GV V WS  AIN+LF L D
Subjt:  FINNLARAKYVEMLRRDFL-FDRGFGDD------LPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQD

Query:  --FPHACFNEMV
            H+ F E V
Subjt:  --FPHACFNEMV

A0A6A2ZUE4 Uncharacterized protein7.7e-0832.65Show/hide
Query:  FINNLARAKYVEMLRRDFLFDRGF------GDDLPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQ
        F++  A+  Y  +  R   F+ GF        +L   +   +  H W +F   P PVN+ IV+EFY+NI +      +VRG+ + ++P AIN  F LQ
Subjt:  FINNLARAKYVEMLRRDFLFDRGF------GDDLPRLLWTGIANHGWSQFCAKPDPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAACGAGAAGAACAGAAGAAAAAGAGGTCGAAGACAAGACAAGAGAAGAAGTAGAGAAAAAAGCAGAGGAAGAAATTTTCCCAGACAAAGGGAAGACAAGGGCAA
AGGTATTGTTAAAGCATCACCGGAACCTGAAGATAGTGAAACAGAGGAGCCACGATTGCCATATAACCACTTCATCAACAATCTTGCTCGAGCAAAATATGTCGAGATGC
TGAGAAGAGACTTTTTGTTTGACCGTGGGTTTGGCGATGATTTGCCACGACTCTTGTGGACTGGAATAGCGAACCATGGCTGGAGTCAATTTTGTGCAAAGCCGGATCCG
GTCAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTGATGATCAAGAGGGATTTCAGGCTATCGTCCGAGGAGTGCCCGTTGACTGGAGCCCAAGAGCTATCAATTC
TTTATTCAACCTCCAGGACTTTCCACACGCATGCTTCAATGAGATGGTGGTGGCACCATCGAATGATCAGTTAAATGCGGCTGTCCGAGAGGTTGGCATCGATGGAGACT
ATCGAAGACGAAAAACGCACATTTCAAGCTACTTATCTGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAACGAGAAGAACAGAAGAAAAAGAGGTCGAAGACAAGACAAGAGAAGAAGTAGAGAAAAAAGCAGAGGAAGAAATTTTCCCAGACAAAGGGAAGACAAGGGCAA
AGGTATTGTTAAAGCATCACCGGAACCTGAAGATAGTGAAACAGAGGAGCCACGATTGCCATATAACCACTTCATCAACAATCTTGCTCGAGCAAAATATGTCGAGATGC
TGAGAAGAGACTTTTTGTTTGACCGTGGGTTTGGCGATGATTTGCCACGACTCTTGTGGACTGGAATAGCGAACCATGGCTGGAGTCAATTTTGTGCAAAGCCGGATCCG
GTCAATTCCAACATTGTTCGAGAGTTTTATGCAAATATTGATGATCAAGAGGGATTTCAGGCTATCGTCCGAGGAGTGCCCGTTGACTGGAGCCCAAGAGCTATCAATTC
TTTATTCAACCTCCAGGACTTTCCACACGCATGCTTCAATGAGATGGTGGTGGCACCATCGAATGATCAGTTAAATGCGGCTGTCCGAGAGGTTGGCATCGATGGAGACT
ATCGAAGACGAAAAACGCACATTTCAAGCTACTTATCTGAAGAGTGA
Protein sequenceShow/hide protein sequence
MQNEKNRRKRGRRQDKRRSREKSRGRNFPRQREDKGKGIVKASPEPEDSETEEPRLPYNHFINNLARAKYVEMLRRDFLFDRGFGDDLPRLLWTGIANHGWSQFCAKPDP
VNSNIVREFYANIDDQEGFQAIVRGVPVDWSPRAINSLFNLQDFPHACFNEMVVAPSNDQLNAAVREVGIDGDYRRRKTHISSYLSEE