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Lag0028276 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028276
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description2-isopropylmalate synthase
Genome locationchr8:17508829..17509385
RNA-Seq ExpressionLag0028276
SyntenyLag0028276
Gene Ontology termsGO:0009098 - leucine biosynthetic process (biological process)
GO:0003852 - 2-isopropylmalate synthase activity (molecular function)
InterPro domainsIPR000891 - Pyruvate carboxyltransferase
IPR013785 - Aldolase-type TIM barrel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580949.1 2-isopropylmalate synthase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.7e-2788.89Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSDKEFLY+ILGEVI AGATTLNITDTVGYTVP EYG LIADIK  TPG++NVIISTHCQNDLGLATANTIA
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

XP_022934697.1 2-isopropylmalate synthase 2, chloroplastic-like isoform X1 [Cucurbita moschata]7.7e-2788.89Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSDKEFLY+ILGEVI AGATTLNITDTVGYTVP EYG LIADIK  TPG++NVIISTHCQNDLGLATANTIA
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

XP_022934698.1 2-isopropylmalate synthase 2, chloroplastic-like isoform X2 [Cucurbita moschata]7.7e-2788.89Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSDKEFLY+ILGEVI AGATTLNITDTVGYTVP EYG LIADIK  TPG++NVIISTHCQNDLGLATANTIA
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

XP_023521686.1 2-isopropylmalate synthase 2, chloroplastic-like, partial [Cucurbita pepo subsp. pepo]7.7e-2788.89Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSDKEFLY+ILGEVI AGATTLNITDTVGYTVP EYG LIADIK  TPG++NVIISTHCQNDLGLATANTIA
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

XP_023528730.1 2-isopropylmalate synthase 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]7.7e-2788.89Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSDKEFLY+ILGEVI AGATTLNITDTVGYTVP EYG LIADIK  TPG++NVIISTHCQNDLGLATANTIA
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

TrEMBL top hitse value%identityAlignment
A0A6J1CKJ3 2-isopropylmalate synthase4.1e-2686.11Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSD+EFLYEILGEVI+AGATTLNI DTVGYT+PVE+G LIADIK+ TPG ENVIISTHCQNDLGLATANT+A
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

A0A6J1CL37 2-isopropylmalate synthase4.1e-2686.11Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSD+EFLYEILGEVI+AGATTLNI DTVGYT+PVE+G LIADIK+ TPG ENVIISTHCQNDLGLATANT+A
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

A0A6J1F3I8 2-isopropylmalate synthase 2, chloroplastic-like isoform X13.8e-2788.89Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSDKEFLY+ILGEVI AGATTLNITDTVGYTVP EYG LIADIK  TPG++NVIISTHCQNDLGLATANTIA
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

A0A6J1F8D9 2-isopropylmalate synthase 2, chloroplastic-like isoform X23.8e-2788.89Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSDKEFLY+ILGEVI AGATTLNITDTVGYTVP EYG LIADIK  TPG++NVIISTHCQNDLGLATANTIA
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

A0A6J1G9D1 2-isopropylmalate synthase2.4e-2684.72Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSD+EFLY+ILGEVI+AGATTLNI DTVGYT+PVE+GNLIADIK+ TPG +NVIISTHCQNDLGLATANT+A
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

SwissProt top hitse value%identityAlignment
O04973 2-isopropylmalate synthase A2.8e-2781.94Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSD+EFLY+ILGEVI+AGATTLNI DTVGYTVP E+G LI DIK+ TPG ENVIISTHCQNDLGL+TANT+A
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

O04974 2-isopropylmalate synthase B8.9e-2680.56Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSD EFLY ILGEVI+AGATTLNI DTVGYTVP E+G LIA IK+ TPG E+VIISTHCQNDLGL+TANT+A
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

Q39891 Probable 2-isopropylmalate synthase8.3e-2477.46Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTI
        RSD+EFLYEILG VIEAGATT+NI DTVG  +P+E G LI DIK  TPG  NVIISTHC NDLGLATANTI
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTI

Q9C550 2-isopropylmalate synthase 2, chloroplastic2.6e-2576.39Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RS++E+LYEILGEVI+AGATTLNI DTVG T+P E+G LIADIK+ TPG +NVIISTHCQNDLGL+TANT++
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

Q9LPR4 2-isopropylmalate synthase 1, chloroplastic7.5e-2573.61Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RS++E+LYEILGEVI+AGATTLNI DTVG T+P E+G LI D+K+ TPG ENV+ISTHCQNDLGL+TANT++
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

Arabidopsis top hitse value%identityAlignment
AT1G18500.1 methylthioalkylmalate synthase-like 45.4e-2673.61Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RS++E+LYEILGEVI+AGATTLNI DTVG T+P E+G LI D+K+ TPG ENV+ISTHCQNDLGL+TANT++
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

AT1G74040.1 2-isopropylmalate synthase 11.8e-2676.39Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RS++E+LYEILGEVI+AGATTLNI DTVG T+P E+G LIADIK+ TPG +NVIISTHCQNDLGL+TANT++
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

AT5G23010.1 methylthioalkylmalate synthase 13.7e-1958.33Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        RSDK+FL +ILGE I+AG T + I DTVG  +P EYG L+  +K+ TPG ++V+++ HC NDLGLATAN+IA
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA

AT5G23020.1 2-isopropylmalate synthase 22.0e-1751.39Show/hide
Query:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA
        R++K+F+ +ILGE I+AGATT+   DTVG  +P E+G L+A +   TPG+++++ + HC NDLG+ATANTI+
Subjt:  RSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAAAGATCTGATAAAGAGTTCCTTTATGAAATTCTGGGTGAAGTTATAGAAGCAGGGGCCACTACTCTCAACATAACAGATACAGTTGGTTACACTGTGCCAGT
TGAATATGGGAATTTGATTGCTGATATAAAATCTTATACTCCAGGCAGTGAAAATGTTATCATTTCAACACATTGCCAGAATGATCTTGGACTTGCAACTGCCAACACAA
TAGCCGTGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCAAAGATCTGATAAAGAGTTCCTTTATGAAATTCTGGGTGAAGTTATAGAAGCAGGGGCCACTACTCTCAACATAACAGATACAGTTGGTTACACTGTGCCAGT
TGAATATGGGAATTTGATTGCTGATATAAAATCTTATACTCCAGGCAGTGAAAATGTTATCATTTCAACACATTGCCAGAATGATCTTGGACTTGCAACTGCCAACACAA
TAGCCGTGAGTTAA
Protein sequenceShow/hide protein sequence
MSQRSDKEFLYEILGEVIEAGATTLNITDTVGYTVPVEYGNLIADIKSYTPGSENVIISTHCQNDLGLATANTIAVS