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Lag0028283 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028283
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:17573040..17575122
RNA-Seq ExpressionLag0028283
SyntenyLag0028283
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]1.6e-0763.64Show/hide
Query:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV
        + +LR+EI  F+Q + E LYEAW+RYK+++RRCPQHG PDWLQV
Subjt:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]4.1e-1177.27Show/hide
Query:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV
        S +LRTEI TFRQL  EQLYEAW+RYK++LRRCPQHG PDWLQ+
Subjt:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV

WP_217860865.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]4.1e-1177.27Show/hide
Query:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV
        S +LRTEI TFRQL  EQLYEAW+RYK++LRRCPQHG PDWLQ+
Subjt:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV

XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]5.1e-0965.91Show/hide
Query:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV
        +T+LRTEIR+FR+ + EQL+E W+RYKE+LR+CPQHGN +WLQ+
Subjt:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV

XP_024030839.1 uncharacterized protein LOC112094384 [Morus notabilis]1.2e-0765.91Show/hide
Query:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV
        + K+R  I TF Q + E LYEAW+RYKEMLR+CP HG PDWLQV
Subjt:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV

TrEMBL top hitse value%identityAlignment
A0A1S3UJZ0 uncharacterized protein LOC1067660165.1e-0761.36Show/hide
Query:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV
        S K+R EI TF Q   E LYEAW+RYKE++R+CP H  P+WLQV
Subjt:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV

A0A2I4G4Q3 uncharacterized protein LOC1090047121.8e-0763.64Show/hide
Query:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV
        +T+LR+EI  F+Q + E LYEAW+ YK+++RRCPQHG PDWLQV
Subjt:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV

A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129452.3e-0761.36Show/hide
Query:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV
        + K+R +I +F Q + E LYEAW+R+KE+LRRCP HG PDWLQV
Subjt:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV

A0A6J0ZYV0 uncharacterized protein LOC1104134132.3e-0761.36Show/hide
Query:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV
        + K+R +I +F Q + E LYEAW+R+KE+LRRCP HG PDWLQV
Subjt:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV

A0A6J1DU19 uncharacterized protein LOC1110243612.4e-0965.91Show/hide
Query:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV
        +T+LRTEIR+FR+ + EQL+E W+RYKE+LR+CPQHGN +WLQ+
Subjt:  STKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATCAAAACATGCCCCATTGTTTTTCGGGATATTTCAAATCCAGAGGAATACCTTCTTTGGGAGGAGGAAATTGATGTCATATTTGACCGCCACCATTATAACGA
AAAAGAAAGCTACCATGACCGATTCTACCAAGGACTTAATGAGGAGATTGCTGAGATGATTGTTGAACGAGAAGAAATTCGACCTTGTGAGGATTTAGAGGAGATGGTGT
ATGTTGCCATCAAGGTGGAAAAGATGCTCCAAAAAAGATCTCTAAGGTACATTATATCTAAGCCTAGCTACAATTCCAACACATTCATGGAAAGAGTTAGTTTACCTACT
ATATATGAGCATGTTGATAAGGTAGGAAGTAGAAAAGAGAAGCTTGCTACTGTTGTACCTATGCATGATAATGATATTTTGCCTACCTTTGCGCTTTACTTGATGACTGA
GCCTTTGCAATTCTTGAATTCAGAGTTGGTTTTCGTATCAACCAAGCTCCGGACTGAGATCAGAACATTTAGGCAGCTTAACAAGGAGCAATTGTACGAGGCATGGAAGA
GATACAAAGAAATGCTTAGGCGATGCCCCCAACATGGAAATCCTGATTGGCTCCAAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGATCAAAACATGCCCCATTGTTTTTCGGGATATTTCAAATCCAGAGGAATACCTTCTTTGGGAGGAGGAAATTGATGTCATATTTGACCGCCACCATTATAACGA
AAAAGAAAGCTACCATGACCGATTCTACCAAGGACTTAATGAGGAGATTGCTGAGATGATTGTTGAACGAGAAGAAATTCGACCTTGTGAGGATTTAGAGGAGATGGTGT
ATGTTGCCATCAAGGTGGAAAAGATGCTCCAAAAAAGATCTCTAAGGTACATTATATCTAAGCCTAGCTACAATTCCAACACATTCATGGAAAGAGTTAGTTTACCTACT
ATATATGAGCATGTTGATAAGGTAGGAAGTAGAAAAGAGAAGCTTGCTACTGTTGTACCTATGCATGATAATGATATTTTGCCTACCTTTGCGCTTTACTTGATGACTGA
GCCTTTGCAATTCTTGAATTCAGAGTTGGTTTTCGTATCAACCAAGCTCCGGACTGAGATCAGAACATTTAGGCAGCTTAACAAGGAGCAATTGTACGAGGCATGGAAGA
GATACAAAGAAATGCTTAGGCGATGCCCCCAACATGGAAATCCTGATTGGCTCCAAGTGTAG
Protein sequenceShow/hide protein sequence
MLIKTCPIVFRDISNPEEYLLWEEEIDVIFDRHHYNEKESYHDRFYQGLNEEIAEMIVEREEIRPCEDLEEMVYVAIKVEKMLQKRSLRYIISKPSYNSNTFMERVSLPT
IYEHVDKVGSRKEKLATVVPMHDNDILPTFALYLMTEPLQFLNSELVFVSTKLRTEIRTFRQLNKEQLYEAWKRYKEMLRRCPQHGNPDWLQV