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Lag0028329 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028329
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr8:18585151..18585791
RNA-Seq ExpressionLag0028329
SyntenyLag0028329
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015386823.1 uncharacterized protein LOC107177480 [Citrus sinensis]1.7e-1040.4Show/hide
Query:  ATSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGRSRQK
        A  R+KP   LLTVKQ   E+L+DYI ++NNE++QV+GYDDG +L   + GL+  +L  S+ +  P +Y E + R ++Y + EE      R + R+++K
Subjt:  ATSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGRSRQK

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.1e-1251.06Show/hide
Query:  RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGRSR
        + KP   LLT+KQ   ESLK+Y+ RFN E LQVEG  D  ALIA +SG++DERL+ S G+  P T++E ++RAQ+Y S  EL I   R+  R R
Subjt:  RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGRSR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.5e-1146.74Show/hide
Query:  RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGR
        R +P   LLT+KQ   ESL+DY+ RFN E LQVEG  D  +L+A +SG++DE L  S G+  P T+ E ++RAQRY S  E     R   G+
Subjt:  RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGR

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]7.0e-1244.79Show/hide
Query:  ATSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGRS
        A  R KP   LLTVKQ   E+L+DYI R+NNE+ QV+GYDDG AL   + GL+  +L  S+ +  P +Y E + RA++Y + EE      +E+G S
Subjt:  ATSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGRS

XP_024047974.1 uncharacterized protein LOC112101548 [Citrus clementina]7.0e-1247.42Show/hide
Query:  ATSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEE-LEIQTRRERGRS
        A  R KP   LLTVKQ   ESL++YI R+N E  QV+GYDDG AL   + GLQ  RL  S+ ++ P TY E ++RA++Y + EE  + +  RE+G S
Subjt:  ATSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEE-LEIQTRRERGRS

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.9e-1046.24Show/hide
Query:  SRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGR
        +R +P   LLT+KQ   ESLKDY+ RFN E LQVEG  D   L+  ISG++DE+L+ S G+    T+ E  +RAQ Y S  EL    R  +G+
Subjt:  SRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGR

A0A6J1D7D2 uncharacterized protein LOC1110183073.2e-1044.09Show/hide
Query:  SRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGR
        SR +P   LLT+KQ   ESL DY+ RFN E LQVEG  +  +L+A +S ++DE L  S G+  P T+ E ++RAQ+Y S  E     R   G+
Subjt:  SRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGR

A0A6J1DWY0 uncharacterized protein LOC1110252931.7e-1146.74Show/hide
Query:  RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGR
        R +P   LLT+KQ   ESL+DY+ RFN E LQVEG  D  +L+A +SG++DE L  S G+  P T+ E ++RAQRY S  E     R   G+
Subjt:  RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGR

A0A6J1DYL6 uncharacterized protein LOC1110257855.4e-1044.57Show/hide
Query:  RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGR
        R +P   LLT+KQ   ESL DY+ RFN E LQ+E   D  +L+A +SG++DE L  S G+  P T+ E ++RAQRY S  E     R   G+
Subjt:  RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGR

A0A6J1DZ49 uncharacterized protein LOC1110248515.2e-1351.06Show/hide
Query:  RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGRSR
        + KP   LLT+KQ   ESLK+Y+ RFN E LQVEG  D  ALIA +SG++DERL+ S G+  P T++E ++RAQ+Y S  EL I   R+  R R
Subjt:  RQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGYDDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGRSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCCAGATCCGATATGAACACTCCTCGGCCGATGGCCGAGGCTGAGCAGAAGCCCAATCGCAAAAAGACCCGCAGAAGTTCGCCACTAAAGACAGCGTCTGGTAC
GTACACAGGGAATAATGACAGGAATAAGTCGGAGGCTCGGGCAAAGCCCGAGGCCGAGCAGGGCCAAAAAGGGCAAGAGCTATCCAAATGGCTAAAAGACAAAGCAACAA
GCCGACAGAAGCCTCAGATCAATTTGCTAACAGTAAAGCAGGGGCCCCGAGAAAGCTTGAAAGATTATATTAACAGATTTAATAACGAAGTTTTGCAGGTAGAAGGCTAT
GATGATGGATTTGCCTTGATTGCTGCGATTTCAGGTCTGCAGGATGAAAGACTGCTCAACTCGATCGGTGAAAGCCACCCACGGACATACGTGGAATTCATGACCCGGGC
ACAAAGGTACACAAGCACCGAGGAACTTGAGATCCAAACAAGAAGAGAAAGAGGCCGAAGCCGGCAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCCAGATCCGATATGAACACTCCTCGGCCGATGGCCGAGGCTGAGCAGAAGCCCAATCGCAAAAAGACCCGCAGAAGTTCGCCACTAAAGACAGCGTCTGGTAC
GTACACAGGGAATAATGACAGGAATAAGTCGGAGGCTCGGGCAAAGCCCGAGGCCGAGCAGGGCCAAAAAGGGCAAGAGCTATCCAAATGGCTAAAAGACAAAGCAACAA
GCCGACAGAAGCCTCAGATCAATTTGCTAACAGTAAAGCAGGGGCCCCGAGAAAGCTTGAAAGATTATATTAACAGATTTAATAACGAAGTTTTGCAGGTAGAAGGCTAT
GATGATGGATTTGCCTTGATTGCTGCGATTTCAGGTCTGCAGGATGAAAGACTGCTCAACTCGATCGGTGAAAGCCACCCACGGACATACGTGGAATTCATGACCCGGGC
ACAAAGGTACACAAGCACCGAGGAACTTGAGATCCAAACAAGAAGAGAAAGAGGCCGAAGCCGGCAAAAGTAG
Protein sequenceShow/hide protein sequence
MEARSDMNTPRPMAEAEQKPNRKKTRRSSPLKTASGTYTGNNDRNKSEARAKPEAEQGQKGQELSKWLKDKATSRQKPQINLLTVKQGPRESLKDYINRFNNEVLQVEGY
DDGFALIAAISGLQDERLLNSIGESHPRTYVEFMTRAQRYTSTEELEIQTRRERGRSRQK