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Lag0028337 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0028337
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationchr8:18790002..18790823
RNA-Seq ExpressionLag0028337
SyntenyLag0028337
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]1.4e-1239.84Show/hide
Query:  AVVRGKMVSFSSVDINSVYQIKAPL--YPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVER
        A+V+GKMV+F    +N +Y ++     YP    + K PS   M+  L+ VA  G++W  +  K   L P +LK  ++VWL FIK  LMPT  D+TIS+ER
Subjt:  AVVRGKMVSFSSVDINSVYQIKAPL--YPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVER

Query:  VMIFYSIMKGLEISIGSIIREEI
        +M+ Y IM+ + +++  II E I
Subjt:  VMIFYSIMKGLEISIGSIIREEI

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.7e-1327.35Show/hide
Query:  VRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIF
        VRG  VS+S   IN+V+ +  P+  + ++ I+N +  ++   L+ VA  G +W  S       + S L P + VW HF+K+RL+PTT    +S +R+++ 
Subjt:  VRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIF

Query:  YSIMKGLEISIGSIIREEILSCGRKRN--------------------NAQRKDKASTSQATPPPRLTPASPPEHTPVSGPTSSSEALAFAFRQLGRIEDK
        +S++ G  I++G +I  EI +C  ++                     N ++        A    R+T   P E T    P+SS  A A + R  G +  +
Subjt:  YSIMKGLEISIGSIIREEILSCGRKRN--------------------NAQRKDKASTSQATPPPRLTPASPPEHTPVSGPTSSSEALAFAFRQLGRIEDK

Query:  LKA-----------------YWVYAKERDETIRE
        LKA                 +W Y+KERD  +++
Subjt:  LKA-----------------YWVYAKERDETIRE

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.9e-1237.04Show/hide
Query:  KGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIFYSIMKGLEISIGSIIREEILSCGRK
        +GN+++ +PS +Q++E  +L+      W  S      L P D+  ++TVW++ +KNRL+PT+ DS+I   R MI Y ++KG+E + G +IR EI SC  K
Subjt:  KGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIFYSIMKGLEISIGSIIREEILSCGRK

Query:  RNNAQRKD
            +  D
Subjt:  RNNAQRKD

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]5.9e-1435.29Show/hide
Query:  VRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIF
        ++ + VSFS+ DIN +YQ+K   Y  GN +I +P+ +QM++ L+++   G++W  S   V  L    L  E  +W++ +K RL+ TT D T+S +RVM  
Subjt:  VRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIF

Query:  YSIMKGLEISIGSIIREEI
        Y I++ + I +G +I  ++
Subjt:  YSIMKGLEISIGSIIREEI

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]3.8e-1329.7Show/hide
Query:  VVRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMI
        +++G +V FS+ DIN +Y++K      GN +I +P  ++M++ L+ +   G QW  S   +K L  S L PE+ +W++ +K R++PT+ D T+S +RVM 
Subjt:  VVRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMI

Query:  FYSIMKGLEISIGSIIREEILSCGRKRNNAQRKDKASTSQATPPPRLT----PASPPEHTPVSGP
         Y I  G+ I +  +I  +     +++    +  +A  ++      LT    P+ P   TP   P
Subjt:  FYSIMKGLEISIGSIIREEILSCGRKRNNAQRKDKASTSQATPPPRLT----PASPPEHTPVSGP

TrEMBL top hitse value%identityAlignment
A0A2P5BNT0 Uncharacterized protein (Fragment)2.0e-1232.56Show/hide
Query:  VRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIF
        VRG  V  S+  IN++Y +   L  + ++ +++ +  ++   L+ VA  G +W  S   V   + S L P + +W HF+K+RL+PTT    +S ERV++ 
Subjt:  VRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIF

Query:  YSIMKGLEISIGSIIREEILSCGRKRNNA
        YS++ G  I++G +I  EI +C  +++ A
Subjt:  YSIMKGLEISIGSIIREEILSCGRKRNNA

A0A2P5CPE8 Uncharacterized protein3.5e-1233.33Show/hide
Query:  VRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIF
        VRG  V  S+  IN++Y +  P+  + ++ ++  +  ++   L+ VA  G +W  S       + S L P + VW HF+K+RL+PTT   T+S ERV++ 
Subjt:  VRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIF

Query:  YSIMKGLEISIGSIIREEILSCGRKRNNA
        YS++ G  I++G II  EI +   +++ A
Subjt:  YSIMKGLEISIGSIIREEILSCGRKRNNA

A0A2P5DXM3 Uncharacterized protein8.3e-1427.35Show/hide
Query:  VRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIF
        VRG  VS+S   IN+V+ +  P+  + ++ I+N +  ++   L+ VA  G +W  S       + S L P + VW HF+K+RL+PTT    +S +R+++ 
Subjt:  VRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIF

Query:  YSIMKGLEISIGSIIREEILSCGRKRN--------------------NAQRKDKASTSQATPPPRLTPASPPEHTPVSGPTSSSEALAFAFRQLGRIEDK
        +S++ G  I++G +I  EI +C  ++                     N ++        A    R+T   P E T    P+SS  A A + R  G +  +
Subjt:  YSIMKGLEISIGSIIREEILSCGRKRN--------------------NAQRKDKASTSQATPPPRLTPASPPEHTPVSGPTSSSEALAFAFRQLGRIEDK

Query:  LKA-----------------YWVYAKERDETIRE
        LKA                 +W Y+KERD  +++
Subjt:  LKA-----------------YWVYAKERDETIRE

A0A5A7TZE0 Protein MNN4-like7.0e-1339.84Show/hide
Query:  AVVRGKMVSFSSVDINSVYQIKAPL--YPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVER
        A+V+GKMV+F    +N +Y ++     YP    + K PS   M+  L+ VA  G++W  +  K   L P +LK  ++VWL FIK  LMPT  D+TIS+ER
Subjt:  AVVRGKMVSFSSVDINSVYQIKAPL--YPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVER

Query:  VMIFYSIMKGLEISIGSIIREEI
        +M+ Y IM+ + +++  II E I
Subjt:  VMIFYSIMKGLEISIGSIIREEI

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220079.2e-1337.04Show/hide
Query:  KGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIFYSIMKGLEISIGSIIREEILSCGRK
        +GN+++ +PS +Q++E  +L+      W  S      L P D+  ++TVW++ +KNRL+PT+ DS+I   R MI Y ++KG+E + G +IR EI SC  K
Subjt:  KGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIFYSIMKGLEISIGSIIREEILSCGRK

Query:  RNNAQRKD
            +  D
Subjt:  RNNAQRKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATCAATAGCGTGTACCAGATCAAAGCACCCTTGTATCCAAAAGGGAATGATTTGATTAA
GAACCCCTCGGCCAAGCAGATGAAAGAAACATTGAAATTAGTGGCCAACCAGGGAGTTCAGTGGATGGAGTCTCAAACAAAAGTGAAGATATTAGTGCCAAGCGATCTCA
AGCCAGAATCGACAGTGTGGCTTCACTTTATCAAGAACAGACTGATGCCCACAACCCAAGACAGTACCATTTCAGTAGAGAGGGTTATGATTTTCTATAGCATCATGAAG
GGGCTTGAGATAAGCATAGGGAGCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAGAAACAATGCCCAAAGAAAGGACAAGGCTTCCACTTCTCAAGCTACTCC
ACCACCGAGGTTGACACCAGCTTCACCTCCTGAGCATACTCCTGTTTCAGGGCCTACATCATCATCAGAGGCCCTTGCATTCGCCTTCCGACAGCTAGGCCGGATCGAAG
ACAAGTTGAAGGCTTACTGGGTCTATGCTAAGGAGAGAGATGAAACCATTAGAGAGTTCTACCTCTCTATTGCCCCAAACATCGCCCCGTGTTCCCTGACTTCCCCGGTC
GCTGCTGCCTCAAGAAGAGAAACAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTTTCTTCTGTTGACATCAATAGCGTGTACCAGATCAAAGCACCCTTGTATCCAAAAGGGAATGATTTGATTAA
GAACCCCTCGGCCAAGCAGATGAAAGAAACATTGAAATTAGTGGCCAACCAGGGAGTTCAGTGGATGGAGTCTCAAACAAAAGTGAAGATATTAGTGCCAAGCGATCTCA
AGCCAGAATCGACAGTGTGGCTTCACTTTATCAAGAACAGACTGATGCCCACAACCCAAGACAGTACCATTTCAGTAGAGAGGGTTATGATTTTCTATAGCATCATGAAG
GGGCTTGAGATAAGCATAGGGAGCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAGAAACAATGCCCAAAGAAAGGACAAGGCTTCCACTTCTCAAGCTACTCC
ACCACCGAGGTTGACACCAGCTTCACCTCCTGAGCATACTCCTGTTTCAGGGCCTACATCATCATCAGAGGCCCTTGCATTCGCCTTCCGACAGCTAGGCCGGATCGAAG
ACAAGTTGAAGGCTTACTGGGTCTATGCTAAGGAGAGAGATGAAACCATTAGAGAGTTCTACCTCTCTATTGCCCCAAACATCGCCCCGTGTTCCCTGACTTCCCCGGTC
GCTGCTGCCTCAAGAAGAGAAACAATCTGA
Protein sequenceShow/hide protein sequence
MSMAVVRGKMVSFSSVDINSVYQIKAPLYPKGNDLIKNPSAKQMKETLKLVANQGVQWMESQTKVKILVPSDLKPESTVWLHFIKNRLMPTTQDSTISVERVMIFYSIMK
GLEISIGSIIREEILSCGRKRNNAQRKDKASTSQATPPPRLTPASPPEHTPVSGPTSSSEALAFAFRQLGRIEDKLKAYWVYAKERDETIREFYLSIAPNIAPCSLTSPV
AAASRRETI